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  1. 1.   Noncanonical circRNA biogenesis driven by alpha and gamma herpesviruses
  2. Dremel, Sarah E; Koparde,Vishal; Arbuckle, Jesse H; Hogan, Chad H; Kristie, Thomas M; Krug, Laurie T; Conrad, Nicholas K; Ziegelbauer, Joseph M
  3. The EMBO Journal. 2025, Mar 03;
  1. 2.   A KSHV RNA-binding protein promotes FOS to inhibit nuclease AEN and transactivate RGS2 for AKT phosphorylation
  2. Majerciak,Vladimir; Alvarado-Hernandez, Beatriz; Ma, Yanping; Duduskar, Shivalee; Lobanov, Alexei; Cam, Maggie; Zheng,Zhi-Ming
  3. mBio. 2024, Dec 10; e0317224.
  1. 3.   Matrin3 regulates mitotic spindle dynamics by controlling alternative splicing of CDC14B
  2. Muys, Bruna R; Shrestha, Roshan L; Anastasakis, Dimitrios G; Pongor, Lorinc; Li, Xiao Ling; Grammatikakis, Ioannis; Polash, Ahsan; Chari,Raj; Gorospe, Myriam; Harris, Curtis C; Aladjem, Mirit I; Basrai, Munira A; Hafner, Markus; Lal, Ashish
  3. Cell Reports. 2023, Mar 15; 42(3): 112260.
  1. 4.   Systematic exploration of dynamic splicing networks reveals conserved multistage regulators of neurogenesis
  2. Han, Hong; Best, Andrew J; Braunschweig, Ulrich; Mikolajewicz, Nicholas; Li, Jack Daiyang; Roth, Jonathan; Chowdhury, Fuad; Mantica, Federica; Nabeel-Shah, Syed; Parada, Guillermo; Brown, Kevin R; O'Hanlon, Dave; Wei, Jiarun; Yao, Yuxi; Zid, Abdelrahman Abou; Comsa, Lim Caden; Jen, Mark; Wang, Jenny; Datti, Alessandro; Gonatopoulos Pournatzis,Thomas; Weatheritt, Robert J; Greenblatt, Jack F; Wrana, Jeffrey L; Irimia, Manuel; Gingras, Anne-Claude; Moffat, Jason; Blencowe, Benjamin J
  3. Molecular Cell. 2022, Jul 31; 82(16): 2982-2999.
  1. 5.   Flexible pri-miRNA structures enable tunable production of 5' isomiRs
  2. Bofill De Ros,Xavier; Hong,Zhenyi; Birkenfeld, Ben; Alamo-Ortiz,Sarangelica; Yang,Acong; Dai,Lisheng; Gu,Shuo
  3. RNA Biology. 2022, Jan; 19(1): 279-289.
  1. 6.   Disruption of the Rbm38-eIF4E Complex with a Synthetic Peptide Pep8 Increases p53 Expression
  2. Lucchesi, Christopher A.; Zhang, Jin; Ma, Buyong; Chen, Mingyi; Chen, Xinbin
  3. CANCER RESEARCH. 2019, FEB 15; 79(4): 807-818.
  1. 7.   Structure and function of Rnt1p: An alternative to RNAi for targeted RNA degradation
  2. Abou Elela, Sherif; Ji,Xinhua
  3. Wiley interdisciplinary reviews. RNA. 2019, May-Jun; 10(3):
  1. 8.   RNA-Protein Interactions Prevent Long RNA Duplex Formation: Implications for the Design of RNA-Based Therapeutics
  2. Bindewald, Eckart; Dai, Lisheng; Kasprzak, Wojciech; Kim, Taejin; Gu, Shuo; Shapiro, Bruce
  3. MOLECULES. 2018, Dec; 23(12):
  1. 9.   ALS/FTD-Linked Mutation in FUS Suppresses Infra-axonal Protein Synthesis and Drives Disease Without Nuclear Loss-of-Function of FUS
  2. Lopez-Erauskin, Jone; Tadokoro, Takahiro; Baughn, Michael W.; Myers, Brian; McAlonis-Downes, Melissa; Chillon-Marinas, Carlos; Asiaban, Joshua N.; Artates, Jonathan; Bui, Anh T.; Vetto, Anne P.; Lee, Sandra K.; Le, Ai Vy; Sun, Ying; Jambeau, Melanie; Boubaker, Jihane; Swing, Debbie; Qiu, Jinsong; Hicks, Geoffrey G.; Ouyang, Zhengyu; Fu, Xiang-Dong; Tessarollo, Lino; Ling, Shuo-Chien; Parone, Philippe A.; Shaw, Christopher E.; Marsala, Martin; lagier-Tourenne, ClotilDe; Cleveland, Don W.; Da Cruz, Sandrine
  3. Neuron. 2018, NOV 21; 100(4): 816-+.
  1. 10.   Englerin A Inhibits EWS-FLI1 DNA Binding in Ewing Sarcoma Cells
  2. Caropreso, V.; Darvishi, E.; Turbyville, T. J.; Ratnayake, R.; Grohar, P. J.; McMahon, J. B.; Woldemichael, G. M.
  3. The Journal of biological chemistry. 2016, 6-May; 291(19): 10058-66.
  1. 11.   PUMILIO-2 Is Involved in the Positive Regulation of Cellular Proliferation in Human Adipose-Derived Stem Cells
  2. Shigunov, P.; Sotelo-Silveira, J.; Kuligovski, C.; de Aguiar, A. M.; Rebelatto, C. K.; Moutinho, J. A.; Brofman, P. S.; Krieger, M. A.; Goldenberg, S.; Munroe, D.; Correa, A.; Dallagiovanna, B.
  3. Stem Cells and Development. 2012, Jan; 21(2): 217-227.
  1. 12.   Nuclear export factor RBM15 facilitates the access of DBP5 to mRNA
  2. Zolotukhin, A. S.; Uranishi, H.; Lindtner, S.; Bear, J.; Pavlakis, G. N.; Felber, B. K.
  3. Nucleic Acids Research. 2009, Nov; 37(21): 7151-62.
  1. 13.   Genomic Analyses of Musashi1 Downstream Targets Show a Strong Association with Cancer-related Processes
  2. Abreu, R. D.; Sanchez-Diaz, P. C.; Vogel, C.; Burns, S. C.; Ko, D. J.; Burton, T. L.; Vo, D. T.; Chennasamudaram, S.; Le, S. Y.; Shapiro, B. A.; Penalva, L.
  3. Journal of Biological Chemistry. 2009 284(18): 12125-12135.
  1. 14.   The mechanism of RNase III action: How Dicer dices
  2. Ji, X. H.
  3. Rna Interference. 2008 320: 99-116.
  1. 15.   Resistance to RevM10 inhibition reflects a conformational switch in the HIV-1 Rev response element
  2. Legiewicz, M.; Badorrek, C. S.; Turner, K. B.; Fabris, D.; Hamm, T. E.; Rekosh, D.; Hammarskjold, M. L.; Le Grice, S.
  3. Proceedings of the National Academy of Sciences of the United States of America. 2008 105(38): 14365-14370.
  1. 16.   Transcription antitermination by translation initiation factor IF1
  2. Phadtare, S.; Kazakov, T.; Bubunenko, M.; Court, D. L.; Pestova, T.; Severinov, K.
  3. Journal of Bacteriology. 2007, Jun; 189(11): 4087-4093.
  1. 17.   Importance of the 5 S rRNA-binding ribosomal proteins for cell viability and translation in Escherichia coli
  2. Korepanov, A. P.; Gongadze, G. M.; Garber, M. B.; Court, D. L.; Bubunenko, M. G.
  3. Journal of Molecular Biology. 2007, Mar; 366(4): 1199-1208.
  1. 18.   Structural basis for non-catalytic and catalytic activities of ribonuclease III
  2. Ji, X. H.
  3. Acta Crystallographica Section D-Biological Crystallography. 2006, Aug; 62: 933-940.
  1. 19.   Structural insight into the mechanism of double-stranded RNA processing by ribonuclease III
  2. Gan, J. H.; Tropea, J. E.; Austin, B. P.; Court, D. L.; Waugh, D. S.; Ji, X. H.
  3. Cell. 2006, JAN 27; 124(2): 355-366.
  1. 20.   Redundant roles for nucleocapsid and matrix RNA-binding sequences in human immunodeficiency virus type 1 assembly
  2. Ott, D. E.; Coren, L. V.; Gagliardi, T. D.
  3. Journal of Virology. 2005, NOV; 79(22): 13839-13847.
  1. 21.   Intermediate states of ribonuclease III in complex with double-stranded RNA
  2. Gan, J. H.; Tropea, J. E.; Austin, B. P.; Court, D. L.; Waugh, D. S.; Ji, X. H.
  3. Structure. 2005, OCT; 13(10): 1435-1442.
  1. 22.   The Ter mutation in the dead end gene causes germ cell loss and testicular germ cell tumours
  2. Youngren, K. K.; Coveney, D.; Peng, X. N.; Bhattacharya, C.; Schmidt, L. S.; Nickerson, M. L.; Lamb, B. T.; Deng, J. M.; Behringer, R. R.; Capel, B.; Rubin, E. M.; Nadeau, J. H.; Matin, A.
  3. Nature. 2005, MAY 19; 435(7040): 360-364.
  1. 23.   Mutational analysis of the DEAD-box RNA helicase eIF4AII characterizes its interaction with transformation suppressor Pdcd4 and eIF4GI
  2. Zakowicz, H.; Yang, H. S.; Stark, C.; Wlodawer, A.; Laronde-Leblanc, N.; Colburn, N. H.
  3. Rna-a Publication of the Rna Society. 2005, MAR; 11(3): 261-274.
  1. 24.   Role of protein-protein interactions in the antiapoptotic function of EWS-Fli-1
  2. Ramakrishnan, R.; Fujimura, Y.; Zou, J. P.; Liu, F.; Lee, L.; Rao, V. N.; Reddy, E. S. P.
  3. Oncogene. 2004, SEP 16; 23(42): 7087-7094.
  1. 25.   The parathyroid hormone mRNA 3 '-untranslated region AU-rich element is an unstructured functional element
  2. Kilav, R.; Bell, O.; Le, S. Y.; Silver, J.; Naveh-Many, T.
  3. Journal of Biological Chemistry. 2004 279(3): 2109-2116.
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