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  1. 1.   Donor telomeres and their magnitude of shortening post-allogeneic haematopoietic cell transplant impact survival for patients with early-stage leukaemia or myelodysplastic syndrome
  2. Gadalla, Shahinaz M; Katki, Hormuzd A; Lai, Tsung-Po; Auer, Paul L; Dagnall,Casey; Bupp, Caitrin; Hutchinson, Amy A; Anderson, James J; Mendez, Kyra J W; Spellman, Stephen R; Stewart, Valerie; Savage, Sharon A; Lee, Stephanie J; Levine, John E; Saber, Wael; Aviv, Abraham
  3. EBioMedicine. 2025, Mar 08; 114: 105641.
  1. 2.   Functionally diverse thymic medullary epithelial cells interplay to direct central tolerance
  2. Ushio, Aya; Matsuda-Lennikov, Mami; Kalle-Youngoue,Felix; Shimizu, Akihide; Abdelmaksoud, Abdalla; Kelly, Michael C; Ishimaru, Naozumi; Takahama, Yousuke
  3. Cell Reports. 2024, Apr 05; 43(4): 114072.
  1. 3.   Clonal hematopoiesis in people with advanced HIV and associated inflammatory syndromes
  2. Rocco, Joseph M; Zhou, Yifan; Liu, Nicholas S; Laidlaw, Elizabeth; Galindo, Frances; Anderson, Megan V; Rupert,Adam; Lucena Lage, Silvia; Ortega-Villa, Ana M; Yu, Shiqin; Lisco, Andrea; Manion, Maura; Vassiliou, George S; Dunbar, Cynthia E; Sereti, Irini
  3. JCI Insight. 2024, Apr 02; 9(9):
  1. 4.   The genetic and evolutionary basis of gene expression variation in East Africans
  2. Kelly, Derek E; Ramdas, Shweta; Ma, Rong; Rawlings-Goss, Renata A; Grant, Gregory R; Ranciaro, Alessia; Hirbo, Jibril B; Beggs, William; Yeager,Meredith; Chanock, Stephen; Nyambo, Thomas B; Omar, Sabah A; Woldemeskel, Dawit; Belay, Gurja; Li, Hongzhe; Brown, Christopher D; Tishkoff, Sarah A
  3. Genome Biology. 2023, Feb 24; 24(1): 35.
  1. 5.   Conformational dynamics of the hepatitis B virus pre-genomic RNA on multiple time scales: implications for viral replication
  2. Olenginski, Lukasz T; Kasprzak,Wojciech; Bergonzo, Christina; Shapiro,Bruce; Dayie, Theodore K
  3. Journal of Molecular Biology. 2022, May 17; 434(18): 167633.
  1. 6.   Are We Making PROGRESS in Preventing Graft-versus-Host Disease and Improving Clinical Outcomes? Impact of BMT CTN 1301 Study Results on Clinical Practice
  2. Hamilton, Betty K; Cutler, Corey; Divine, Clint; Juckett, Mark; LeMaistre, Charles; Stewart, Susan; Wilder, Jennifer; Horowitz, Mary; Khera, Nandita; Burns, Linda J
  3. Transplantation and Cellular Therapy. 2022, May 09;
  1. 7.   Comparison of somatic mutation landscapes in Chinese versus European breast cancer patients
  2. Zhu, Bin; Joo, Lijin; Zhang, Tongwu; Koka, Hela; Lee, DongHyuk; Shi, Jianxin; Lee, Priscilla; Wang, Difei; Wang, Feng; Chan, Wing-Cheong; Law, Sze Hong; Tsoi, Yee-Kei; Tse, Gary M; Lai, Shui Wun; Wu, Cherry; Yang, Shuyuan; Yang Chan, Emily Ying; Shan Wong, Samuel Yeung; Wang, Mingyi; Song, Lei; Jones, Kristine; Zhu, Bin; Hutchinson, Amy; Hicks, Belynda; Prokunina-Olsson, Ludmila; Garcia-Closas, Montserrat; Chanock, Stephen; Tse, Lap Ah; Yang, Xiaohong R
  3. HGG Advances. 2021, Dec 3; 3(1): 100076.
  1. 8.   Learning from HIV-1 to predict the immunogenicity of T cell epitopes in SARS-CoV-2
  2. Gao, Ang; Chen, Zhilin; Amitai, Assaf; Doelger, Julia; Mallajosyula, Vamsee; Sundquist, Emily; Segal, Florencia Pereyra; Carrington,Mary; Davis, Mark M.; Streeck, Hendrik; Chakraborty, Arup K.; Julg, Boris
  3. iScience. 2021, Apr 23; 24(4):
  1. 9.   An Integrated Epigenomic and Transcriptomic Map of Mouse and Human aß T Cell Development
  2. Chopp, Laura B; Gopalan, Vishaka; Ciucci, Thomas; Ruchinskas,Allison; Rae, Zachary; Lagarde, Manon; Gao, Yayi; Li, Caiyi; Bosticardo, Marita; Pala, Francesca; Livak, Ferenc; Kelly,Michael; Hannenhalli, Sridhar; Bosselut, Rémy
  3. Immunity. 2020, Dec 15; 53(6): 1182-1201.e8.
  1. 10.   HIV-1 viremia not suppressible by antiretroviral therapy can originate from large T cell clones producing infectious virus
  2. Halvas, Elias K; Joseph, Kevin W; Brandt, Leah D; Guo,Amber; Sobolewski, Michele D; Jacobs, Jana L; Tumiotto, Camille; Bui, John K; Cyktor, Joshua C; Keele,Brandon; Morse, Gene D; Bale, Michael J; Shao,Wei; Kearney,Mary; Coffin, John M; Rausch,Jason; Wu,Xiaolin; Hughes,Stephen; Mellors, John W
  3. The Journal of clinical investigation. 2020, NOV 2; 130(11): 5847-5857.
  1. 11.   Enhanced Co-Expression Extrapolation (COXEN) Gene Selection Method for Building Anti-Cancer Drug Response Prediction Models
  2. Zhu, Yitan; Brettin, Thomas; Evrard,Yvonne; Xia, Fangfang; Partin, Alexander; Shukla, Maulik; Yoo, Hyunseung; Doroshow, James H; Stevens, Rick L
  3. Genes. 2020, Sep 11; 11(9): pii: E1070.
  1. 12.   Genome-wide association study of café-au-lait macule number in neurofibromatosis type 1
  2. Sung, Heejong; Hyland, Paula L; Pemov, Alexander; Sabourin, Jeremy A; Baldwin, Andrea M; Bass,Sara; Teshome,Kedest; Luo,Wen; Widemann, Brigitte C; Stewart, Douglas R; Wilson, Alexander F
  3. Molecular genetics & genomic medicine. 2020, Aug 31; e1400.
  1. 13.   Computationally Optimized SARS-CoV-2 MHC Class I and II Vaccine Formulations Predicted to Target Human Haplotype Distributions
  2. Liu, Ge; Carter, Brandon; Bricken, Trenton; Jain, Siddhartha; Viard,Mathias; Carrington,Mary; Gifford, David K
  3. Cell systems. 2020, AUG 26; 11(2): 131-144.e6.
  1. 14.   High-efficiency enrichment enables identification of aptamers to circulating Plasmodium falciparum-infected erythrocytes
  2. Oteng, Eugene K; Gu, Wenjuan; McKeague, Maureen
  3. Scientific reports. 2020, Jun 16; 10(1): 9706.
  1. 15.   Structural Insights into APOBEC3-Mediated Lentiviral Restriction
  2. Delviks-Frankenberry, Krista A.; Desimmie, Belete A.; Pathak,Vinay
  3. Viruses. 2020, JUN; 12(6):
  1. 16.   HLA heterozygote advantage against HIV-1 is driven by quantitative and qualitative differences in HLA allele-specific peptide presentation
  2. Arora, Jatin; Pierini, Federica; McLaren, Paul J; Carrington,Mary; Fellay, Jacques; Lenz, Tobias L
  3. Molecular biology and evolution. 2020, MAR; 37(3): 639-650.
  1. 17.   Elements in the ? Immunity Region Regulate Phage Development: Beyond the "Genetic Switch"
  2. Thomason,Lynn; Morrill, Kathleen; Murray, Gillian; Court,Carolyn; Shafer, Brenda; Schneider,Tom; Court,Don
  3. Molecular microbiology. 2019, DEC; 112(6): 1798-1813.
  1. 18.   De Novo Assembly and Annotation from Parental and F1 Puma Genomes of the Florida Panther Genetic Restoration Program
  2. Ochoa, Alexander; Onorato, David P; Fitak, Robert R; Roelke-Parker,Melody; Culver, Melanie
  3. G3 (Bethesda, Md.). 2019, Nov; 9(11): 3531-3536.
  1. 19.   Improving (Q)SAR predictions by examining bias in the selection of compounds for experimental testing
  2. Pogodin, P V; Lagunin, A A; Filimonov, D A; Nicklaus,Marc; Poroikov, V V
  3. SAR and QSAR in environmental research. 2019, OCT 3; 30(10): 759-773.
  1. 20.   Molecular alterations induced by Yersinia pestis, dengue virus and Staphylococcal enterotoxin B under severe stress
  2. Muhie, Seid; Campbell,Ross; Gautam, Aarti; Hammamieh, Rasha; Cummings, Christiano; Jett, Marti
  3. Brain, behavior, and immunity. 2019, AUG; 80: 725-741.
  1. 21.   Clones of infected cells arise early in HIV-infected individuals
  2. Coffin, John M; Wells, David W; Zerbato, Jennifer M; Kuruc, Joann D; Guo, Shuang; Luke,Brian; Eron, Joseph J; Bale,Michael; Spindler,Jon; Simonetti, Francesco R; Hill,Shawn; Kearney,Mary; Maldarelli,Frank; Wu, Xiaolin; Mellors, John W; Hughes,Stephen
  3. JCI insight. 2019, Jun 20; 4(12): pii: 128432. .
  1. 22.   Antigen binding allosterically promotes Fc receptor recognition
  2. Zhao, Jun; Nussinov, Ruth; Ma, Buyong
  3. mAbs. 2019, Jan; 11(1): 58-74.
  1. 23.   Structural insights into the mechanism of double strand break formation by Hermes, a hAT family eukaryotic DNA transposase
  2. Hickman, Alison B.; Voth, Andrea; Ewis, Hosam; Li, Xianghong; Craig, Nancy L.; Dyda, Fred
  3. NUCLEIC ACIDS RESEARCH. 2018, NOV 2; 46(19): 10286-10301.
  1. 24.   Chemoinformatics at the CADD Group of the National Cancer Institute
  2. Peach,Megan; Nicklaus,Marc
  3. Applied Chemoinformatics: Achievements and Future Opportunities. 2018; 385-393.
  1. 25.   Loci associated with skin pigmentation identified in African populations
  2. Crawford, Nicholas G.; Kelly, Derek E.; Hansen, Matthew E. B.; Beltrame, Marcia H.; Fan, Shaohua; Bowman, Shanna L.; Jewett, Ethan; Ranciaro, Alessia; Thompson, Simon; Lo, Yancy; Pfeifer, Susanne P.; Jensen, Jeffrey D.; Campbell, Michael C.; Beggs, William; Hormozdiari, Farhad; Mpoloka, Sununguko Wata; Mokone, Gaonyadiwe George; Nyambo, Thomas; Meskel, Dawit Wolde; Belay, Gurja; Haut, Jake; Rothschild, Harriet; Zon, Leonard; Zhou, Yi; Kovacs, Michael A.; Xu, Mai; Zhang, Tongwu; Bishop, Kevin; Sinclair, Jason; Rivas, Cecilia; Elliot, Eugene; Choi, Jiyeon; Li, Shengchao; Hicks, Belynda; Burgess, Shawn; Abnet, Christian; Watkins-Chow, Dawn E.; Oceana, Elena; Song, Yun S.; Eskin, Eleazar; Brown, Kevin M.; Marks, Michael S.; Loftus, Stacie K.; Pavan, William J.; Yeager, Meredith; Chanock, Stephen; Tishkoff, Sarah A.
  3. Science. 2017, Nov 17; 358(6365): pii: eaan8433.
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