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  1. 1.   Modeling and Analysis of HIV-1 Pol Polyprotein as a Case Study for Predicting Large Polyprotein Structures
  2. Hao,Ming; Imamichi,Tomozumi; Chang,Weizhong
  3. International Journal of Molecular Sciences. 2024, Feb 02; 25(3):
  1. 2.   Structural variant analysis of a cancer reference cell line sample using multiple sequencing technologies
  2. Talsania,Keyur; Shen,Tsai-Wei; Chen, Xiongfong; Jaeger, Erich; Li, Zhipan; Chen, Zhong; Chen, Wanqiu; Tran,Bao; Kusko, Rebecca; Wang, Limin; Pang, Andy Wing Chun; Yang, Zhaowei; Choudhari, Sulbha; Colgan, Michael; Fang, Li Tai; Carroll, Andrew; Shetty,Jyoti; Kriga,Yuliya; German,Oksana; Smirnova,Tatyana; Liu, Tiantain; Li, Jing; Kellman, Ben; Hong, Karl; Hastie, Alex R; Natarajan, Aparna; Moshrefi, Ali; Granat, Anastasiya; Truong, Tiffany; Bombardi, Robin; Mankinen, Veronnica; Meerzaman, Daoud; Mason, Christopher E; Collins, Jack; Stahlberg, Eric; Xiao, Chunlin; Wang, Charles; Xiao, Wenming; Zhao,Yongmei
  3. Genome Biology. 2022, Dec 13; 23(1): 255.
  1. 3.   Structures of the Type IX Secretion/Gliding Motility Motor from across the Phylum Bacteroidetes
  2. Hennell James, Rory; Deme,Justin; Hunter, Alicia; Berks, Ben C; Lea,Susan
  3. mBio. 2022, Apr 21; e0026722.
  1. 4.   Polycistronic baculovirus expression of SUGT1 enables high-yield production of recombinant leucine-rich repeat proteins and protein complexes
  2. Snead,Kelly; Wall,Vanessa; Ambrose,Hannah; Esposito,Dom; Drew,Matt
  3. Protein Expression and Purification. 2022, Feb 04; 193: 106061.
  1. 5.   A transient conformation facilitates ligand binding to the adenine riboswitch
  2. Wu, Lin; Chen, Dian; Ding,Jienyu; Liu, Yu
  3. iScience. 2021, Dec 17; 24(12): 103512.
  1. 6.   RNF219 attenuates global mRNA decay through inhibition of CCR4-NOT complex-mediated deadenylation
  2. Poetz, Fabian; Corbo,Joshua; Levdansky,Yevgen; Spiegelhalter, Alexander; Lindner, Doris; Magg, Vera; Lebedeva, Svetlana; Schweiggert, Jorg; Schott, Johanna; Valkov,Eugene; Stoecklin, Georg
  3. Nature Communications. 2021, Dec 9; 12(1):
  1. 7.   A molecular mechanism for the generation of ligand-dependent differential outputs by the epidermal growth factor receptor
  2. Huang, Yongjian; Ognjenovic,Jana; Karandur, Deepti; Miller, Kate; Merk,Alan; Subramaniam, Sriram; Kuriyan, John
  3. Elife. 2021, Nov 30; 10
  1. 8.   Engineering well-expressed, V2-immunofocusing HIV-1 envelope glycoprotein membrane trimers for use in heterologous prime-boost vaccine regimens
  2. Crooks, Emma T.; Almanza, Francisco; D'Addabbo, Alessio; Duggan, Erika; Zhang, Jinsong; Wagh, Kshitij; Mou, Huihui; Allen, Joel D.; Thomas, Alyssa; Osawa, Keiko; Korber, Bette T.; Tsybovsky,Yaroslav; Cale, Evan; Nolan, John; Crispin, Max; Verkoczy, Laurent K.; Binley, James M.
  3. PLoS Pathogens. 2021, Oct; 17(10):
  1. 9.   The mechanism driving a solid-solid phase transition in a biomacromolecular crystal
  2. Ramakrishnan, Saminathan; Stagno,Jason; Heinz,Will; Zuo, Xiaobing; Yu,Ping; Wang,Yun-Xing
  3. IUCrJ. 2021, Jul 01; 8(Pt 4): 655-664.
  1. 10.   Dr. Alexander Wlodawer-celebrating five decades of service to the structural biology community
  2. Minor, Wladek; Jaskolski, Mariusz; Martin, Seamus J.; Dauter,Zbigniew
  3. FEBS JOURNAL. 2021, Jul; 288(14): 4160-4164.
  1. 11.   Structural and biochemical properties of L-asparaginase
  2. Lubkowski,Jacek; Wlodawer,Alexander
  3. The FEBS journal. 2021, Jun 19;
  1. 12.   Normal Mode Analysis of KRas4B Reveals Partner Specific Dynamics
  2. Eren, Meryem; Tuncbag, Nurcan; Jang,Hyunbum; Nussinov,Ruth; Gursoy, Attila; Keskin, Ozlem
  3. The journal of physical chemistry. B. 2021, May 27; 125(20): 5210-5221.
  1. 13.   Interactions of APOBEC3s with DNA and RNA
  2. Maiti, Atanu; Hou, Shurong; Schiffer, Celia A.; Matsuo,Hiroshi
  3. Current opinion in structural biology. 2021, Apr; 67: 195-204.
  1. 14.   An optimized protocol for acquiring and processing cryo-EM data of human 26S proteasome with M1-Ub6
  2. Chen,Xiang; Shi,Dan; Zhang,Ping; Walters,Kylie
  3. STAR protocols. 2021, Mar 19; 2(1): 100278.
  1. 15.   Tying the knot in the tetrahydrofolate (THF) riboswitch: A molecular basis for gene regulation
  2. Wilt,Haley; Yu,Ping; Tan, Kemin; Wang, Yun-Xing; Stagno,Jason
  3. Journal of Structural Biology. 2021, Mar; 213(1):
  1. 16.   Protein crystallography: alive and well
  2. Wlodawer,Alexander
  3. The FEBS journal. 2021, Mar; 288(20): 5786-5787.
  1. 17.   Inhibition of Nonfunctional Ras
  2. Nussinov,Ruth; Jang, Hyunbum; Gursoy, Attila; Keskin, Ozlem; Gaponenko, Vadim
  3. Cell Chemical Biology. 2021, Feb 18; 28(2): 121-133.
  1. 18.   Celebrating the 75th birthday of Professor Wladek Minor, one of the most accomplished Polish-American structural biologists
  2. Jaskolski, Mariusz; Wlodawer,Alexander; Dauter, Zbigniew; Shabalin, Ivan; Chruszcz, Maksymilian
  3. Acta Biochimica Polonica. 2021, Jan 21; 68(1): 1-4.
  1. 19.   Cryo-EM Structures of SARS-CoV-2 Spike without and with ACE2 Reveal a pH-Dependent Switch to Mediate Endosomal Positioning of Receptor-Binding Domains
  2. Zhou, Tongqing; Tsybovsky,Yaroslav; Gorman, Jason; Rapp, Micah; Cerutti, Gabriele; Chuang, Gwo-Yu; Katsamba, Phinikoula S; Sampson, Jared M; Schön, Arne; Bimela, Jude; Boyington, Jeffrey C; Nazzari, Alexandra; Olia, Adam S; Shi, Wei; Sastry, Mallika; Stephens,Tyler; Stuckey, Jonathan; Teng, I-Ting; Wang, Pengfei; Wang, Shuishu; Zhang, Baoshan; Friesner, Richard A; Ho, David D; Mascola, John R; Shapiro, Lawrence; Kwong, Peter D
  3. Cell Host & Microbe. 2020, Dec 9; 28: 867-+.
  1. 20.   Cryo-EM Reveals Unanchored M1-Ubiquitin Chain Binding at hRpn11 of the 26S Proteasome
  2. Chen,Xiang; Dorris, Zachary; Shi,Dan; Huang, Rick K; Khant,Htet; Fox,Tara; De Val Alda,Natalia; Williams, Dewight; Zhang,Ping; Walters,Kylie
  3. Structure (London, England : 1993). 2020, NOV 3; 28(11): 1206-+.
  1. 21.   Specificity Studies of the Venezuelan Equine Encephalitis Virus Non-Structural Protein 2 Protease Using Recombinant Fluorescent Substrates
  2. Bozóki, Beáta; Mótyán, János András; Hoffka, Gyula; Waugh,David; Tozsér, József
  3. International journal of molecular sciences. 2020, Oct 16; 21(20): pii: E7686.
  1. 22.   Membrane surface recognition by the ASAP1 PH domain and consequences for interactions with the small GTPase Arf1
  2. Soubias, Olivier; Pant, Shashank; Heinrich, Frank; Zhang,Yue; Roy, Neeladri Sekhar; Li,Jess; Jian, Xiaoying; Yohe, Marielle E; Randazzo, Paul A; Lösche, Mathias; Tajkhorshid, Emad; Byrd,Robert
  3. Science advances. 2020, Sep; 6(40): pii: eabd1882.
  1. 23.   RAS internal tandem duplication disrupts GTPase-activating protein (GAP) binding to activate oncogenic signaling
  2. Nelson, Andrew C; Turbyville,Tommy; Dharmaiah,Sathiya; Rigby,Megan; Yang, Rendong; Wang, Ting-You; Columbus,John; Stephens, Robert; Taylor,Troy; Sciacca, Drew; Onsongo, Getiria; Sarver, Anne; Subramanian, Subbaya; Nissley,Dwight; Simanshu,Dhirendra; Lou, Emil
  3. The Journal of biological chemistry. 2020, JUL 10; 295(28): 9335-9348.
  1. 24.   PI3K inhibitors: review and new strategies
  2. Zhang,Mingzhen; Jang,Hyunbum; Nussinov,Ruth
  3. CHEMICAL SCIENCE. 2020, JUN 21; 11(23): 5855-5865.
  1. 25.   Modeling ligand docking to RNA in the design of RNA-based nanostructures
  2. Kasprzak,Wojciech; Ahmed, Nour Ali; Shapiro,Bruce
  3. Current opinion in biotechnology. 2020, JUN; 63: 16-25.
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