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  1. 1.   Phase 1 trial to model primary, secondary, and tertiary dengue using a monovalent vaccine
  2. Odio, Camila D; Lowman, Kelsey E; Law, Melissa; Aogo, Rosemary A; Hunsberger, Sally; Wood, Brad J; Kassin, Michael; Levy, Elliot; Callier,Viviane; Firdous, Saba; Hasund, Chloe M; Voirin, Charlie; Kattappuram, Robbie; Yek, Christina; Manning, Jessica; Durbin, Anna; Whitehead, Stephen S; Katzelnick, Leah C
  3. BMC infectious diseases. 2023, May 23; 23(1): 345.
  1. 2.   Genetic changes associated with relapse in favorable histology Wilms tumor: A Children's Oncology Group AREN03B2 study
  2. Gadd, Samantha; Huff, Vicki; Skol, Andrew D; Renfro, Lindsay A; Fernandez, Conrad V; Mullen, Elizabeth A; Jones, Corbin D; Hoadley, Katherine A; Yap, Kai Lee; Ramirez, Nilsa C; Aris, Sheena; Phung, Quy H; Perlman, Elizabeth J
  3. Cell Reports. Medicine. 2022, May 25; 100644.
  1. 3.   EML4-ALK induces cellular senescence in mortal normal human cells and promotes anchorage-independent growth in hTERT-transduced normal human cells
  2. Miyanaga, Akihiko; Matsumoto, Masaru; Beck, Jessica A.; Horikawa, Izumi; Oike, Takahiro; Okayama, Hirokazu; Tanaka, Hiromi; Burkett,Sandra; Robles, Ana I.; Khan, Mohammed; Lissa, Delphine; Seike, Masahiro; Gemma, Akihiko; Mano, Hiroyuki; Harris, Curtis C.
  3. BMC Cancer. 2021, Mar 24; 21(1):
  1. 4.   Analysis of Ugandan cervical carcinomas identifies human papillomavirus clade-specific epigenome and transcriptome landscapes
  2. Gagliardi, Alessia; Porter, Vanessa L; Zong, Zusheng; Bowlby, Reanne; Titmuss, Emma; Namirembe, Constance; Griner, Nicholas B; Petrello, Hilary; Bowen, Jay; Chan, Simon K; Culibrk, Luka; Darragh, Teresa M; Stoler, Mark H; Wright, Thomas C; Gesuwan, Patee; Dyer,Maureen; Ma, Yussanne; Mungall, Karen L; Jones, Steven J M; Nakisige, Carolyn; Novik, Karen; Orem, Jackson; Origa, Martin; Gastier-Foster, Julie M; Yarchoan, Robert; Casper, Corey; Mills, Gordon B; Rader, Janet S; Ojesina, Akinyemi I; Gerhard, Daniela S; Mungall, Andrew J; Marra, Marco A
  3. Nature genetics. 2020, Aug; 52(8): 800-810.
  1. 5.   Deducing putative ancestral forms of GNRA/receptor interactions from the ribosome
  2. Calkins, Erin R.; Zakrevsky,Paul; Keleshian, Vasken L.; Aguilar, Eduardo G.; Geary, Cody; Jaeger, Luc
  3. NUCLEIC ACIDS RESEARCH. 2019, Jan 10; 47(1): 480-494.
  1. 6.   Topological structure determination of RNA using small angle X-ray scattering
  2. Bhandari, Yuba; Fan, Lixin; Fang, Xianyang; Zaki, George; Stahlberg, Eric; Jiang, Wei; Schwieters, Charles D; Stagno, Jason; Wang, Yun-Xing
  3. Journal of molecular biology. 2017, Nov 24; 429(23): 3635-3649.
  1. 7.   MDM1 is a microtubule-binding protein that negatively regulates centriole duplication
  2. Van de Mark, D.; Kong, D.; Loncarek, J.; Stearns, T.
  3. Molecular Biology of the Cell. 2015, 1-Nov; 26(21): 3788-802.
  1. 8.   TrkA in vivo function is negatively regulated by ubiquitination
  2. Kiris, E.; Wang, T.; Yanpallewar, S.; Dorsey, S. G.; Becker, J.; Bavari, S.; Palko, M. E.; Coppola, V.; Tessarollo, L.
  3. Journal of Neuroscience. 2014, 12-Mar; 34(11): 4090-8.
  1. 9.   Self-Assembling RNA Nanorings Based on RNAI/II Inverse Kissing Complexes
  2. Grabow, W. W.; Zakrevsky, P.; Afonin, K. A.; Chworos, A.; Shapiro, B. A.; Jaeger, L.
  3. Nano Letters. 2011, Feb; 11(2): 878-887.
  1. 10.   Coarse-graining RNA nanostructures for molecular dynamics simulations
  2. Paliy, M.; Melnik, R.; Shapiro, B. A.
  3. Physical Biology. 2010, Sep; 7(3): 12.
  1. 11.   Allosteric activation of E2-RING finger-mediated ubiquitylation by a structurally defined specific E2-binding region of gp78
  2. Das, R.; Mariano, J.; Tsai, Y. C.; Kalathur, R. C.; Kostova, Z.; Li, J.; Tarasov, S. G.; McFeeters, R. L.; Altieri, A. S.; Ji, X.; Byrd, R. A.; Weissman, A. M.
  3. Molecular Cell. 2009, Jun 26; 34(6): 674-85.
  1. 12.   Engineered CH2 domains (nanoantibodies)
  2. Dimitrov, D. S.
  3. Mabs. 2009, Jan-Feb; 1(1): 26-8.
  1. 13.   Dynamics of antibody domains studied by solution NMR
  2. Vu, B. K.; Walsh, J. D.; Dimitrov, D. S.; Ishima, R.
  3. Methods in molecular biology (Clifton, N.J.). 2009 525: 533-43, xv.
  1. 14.   The structure of free L11 and functional dynamics of L11 in free, L11-rRNA(58 nt) binary and L11-rRNA(58 nt)-thiostrepton ternary complexes
  2. Lee, D.; Walsh, J. D.; Yu, P.; Markus, M. A.; Choli-Papadopoulou, T.; Schwieters, C. D.; Krueger, S.; Draper, D. E.; Wang, Y. X.
  3. Journal of Molecular Biology. 2007, Apr; 367(4): 1007-1022.
  1. 15.   A permissive secondary structure-guided superposition tool for clustering of protein fragments toward protein structure prediction via fragment assembly
  2. Wainreb, G.; Haspel, N.; Wolfson, H. J.; Nussinov, R.
  3. Bioinformatics. 2006, Jun; 22(11): 1343-1352.
  1. 16.   Determining a helical protein structure using peptide pixels
  2. Walsh, J. D.; Kuszweski, J.; Wang, Y. X.
  3. Journal of Magnetic Resonance. 2005, NOV; 177(1): 155-159.
  1. 17.   Retinoic acid-induced downmodulation of telomerase activity in human cancer cells
  2. Xiao, X. D.; Sidorov, I. A.; Gee, J.; Lempicki, R. A.; Dimitrov, D. S.
  3. Experimental and Molecular Pathology. 2005, OCT; 79(2): 108-117.
  1. 18.   ARTS: alignment of RNA tertiary structures
  2. Dror, O.; Nussinov, R.; Wolfson, H.
  3. Bioinformatics. 2005, SEP; 21(Suppl. 2): 47-53.
  1. 19.   Homology model of the CDK1/cyclin B complex
  2. McGrath, C. F.; Pattabiraman, N.; Kellogg, G. E.; Lemcke, T.; Kunick, C.; Sausville, E. A.; Zaharevitz, D. W.; Gussio, R.
  3. Journal of Biomolecular Structure & Dynamics. 2005, APR; 22(5): 493-502.
  1. 20.   Mutational analysis of the DEAD-box RNA helicase eIF4AII characterizes its interaction with transformation suppressor Pdcd4 and eIF4GI
  2. Zakowicz, H.; Yang, H. S.; Stark, C.; Wlodawer, A.; Laronde-Leblanc, N.; Colburn, N. H.
  3. Rna-a Publication of the Rna Society. 2005, MAR; 11(3): 261-274.
  1. 21.   A molecular phylogeny for bats illuminates biogeography and the fossil record
  2. Teeling, E. C.; Springer, M. S.; Madsen, O.; Bates, P.; O'Brien, S. J.; Murphy, W. J.
  3. Science. 2005, JAN 28; 307(5709): 580-584.
  1. 22.   Interactions between immunoglobulin-like and catalytic modules in Clostridium thermocellum cellulosomal cellobiohydrolase CbhA
  2. Kataeva, I. A.; Uversky, V. N.; Brewer, J. M.; Schubot, F.; Rose, J. P.; Wang, B. C.; Ljungdahl, L. G.
  3. Protein Engineering Design & Selection. 2004, NOV; 17(11): 759-769.
  1. 23.   Cytotoxic alkaloids from the marine sponge Thorectandra sp
  2. Charan, R. D.; McKee, T. C.; Boyd, M. R.
  3. Natural Product Research. 2004 18(3): 225-229.
  1. 24.   From base-pair to tertiary interactions: G-A linkers in RNA structures
  2. Xin, Y. R.; Lu, X. J.; Olson, W. K.
  3. Biophysical Journal. 2004 86(1, Part 2 Suppl. S): 144A-144A.
  1. 25.   Role of Ets/Id proteins for telomerase regulation in human cancer cells
  2. Xiao, X. D.; Athanasiou, M.; Sidorov, I. A.; Horikawa, I.; Cremona, G.; Blair, D.; Barret, J. C.; Dimitrova, D. S.
  3. Experimental and Molecular Pathology. 2003 75(3): 238-247.
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