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  1. 1.   An Integrated Epigenomic and Transcriptomic Map of Mouse and Human aß T Cell Development
  2. Chopp, Laura B; Gopalan, Vishaka; Ciucci, Thomas; Ruchinskas,Allison; Rae, Zachary; Lagarde, Manon; Gao, Yayi; Li, Caiyi; Bosticardo, Marita; Pala, Francesca; Livak, Ferenc; Kelly,Michael; Hannenhalli, Sridhar; Bosselut, Rémy
  3. Immunity. 2020, Dec 15; 53(6): 1182-1201.e8.
  1. 2.   Differential Expression of the Transcription Factor GATA3 Specifies Lineage and Functions of Innate Lymphoid Cells
  2. Zhong, Chao; Zheng, Mingzhu; Cui, Kairong; Martins, Andrew J; Hu, Gangqing; Li, Dan; Tessarollo,Lino; Kozlov,Serguei; Keller,Jonathan; Tsang, John S; Zhao, Keji; Zhu, Jinfang
  3. Immunity. 2020, JAN 14; 52(1): 83-+.
  1. 3.   Intestinal PPARa Protects Against Colon Carcinogenesis via Regulation of Methyltransferases DNMT1 and PRMT6
  2. Luo, Yuhong; Xie, Cen; Brocker, Chad N; Fan, Jie; Wu, Xuan; Feng, Lijin; Wang, Qiong; Zhao, Jie; Lu, Dasheng; Tandon,Mayank; Cam, Maggie; Krausz, Kristopher W; Liu, Weiwei; Gonzalez, Frank J
  3. Gastroenterology. 2019, Sep; 157(3): 744-759.e4.
  1. 4.   Viral DNA Replication Orientation and hnRNPs Regulate Transcription of the Human Papillomavirus 18 Late Promoter
  2. Wang, Xiaohong; Liu, Haibin; Ge, Hui; Ajiro, Masahiko; Sharma, Nishi R; Meyers, Craig; Morozov, Pavel; Tuschl, Thomas; Klar, Amar; Court, Don; Zheng, Zhi-Ming
  3. mBio. 2017, May 30; 8(3): pii: e00713-17.
  1. 5.   Emergence of Simian Immunodeficiency Virus-Specific Cytotoxic CD4(+) T Cells and Increased Humoral Responses Correlate with Control of Rebounding Viremia in CD8-Depleted Macaques Infected with Rev-Independent Live-Attenuated Simian Immunodeficiency Virus
  2. von Gegerfelt, A.; Valentin, A.; Alicea, C.; Van Rompay, K. K. A.; Marthas, M. L.; Montefiori, D. C.; Pavlakis, G. N.; Felber, B. K.
  3. Journal of Immunology. 2010, Sep 15; 185(6): 3348-3358.
  1. 6.   Sequence signatures and mRNA concentration can explain two-thirds of protein abundance variation in a human cell line
  2. Vogel, C.; Abreu, R. D.; Ko, D. J.; Le, S. Y.; Shapiro, B. A.; Burns, S. C.; Sandhu, D.; Boutz, D. R.; Marcotte, E. M.; Penalva, L. O.
  3. Molecular Systems Biology. 2010, Aug; 6: 9.
  1. 7.   A selective small-molecule nuclear factor-kappa B inhibitor from a high-throughput cell-based assay for "activator protein-1 hits"
  2. Kang, M. I.; Henrich, C. J.; Bokesch, H. R.; Gustafson, K. R.; McMahon, J. B.; Baker, A. R.; Young, M. R.; Colburn, N. H.
  3. Molecular Cancer Therapeutics. 2009 8(3): 571-581.
  1. 8.   Tumor-specific Th17-polarized cells eradicate large established melanoma
  2. Muranski, P.; Boni, A.; Antony, P. A.; Cassard, L.; Irvine, K. R.; Kaiser, A.; Paulos, C. M.; Palmer, D. C.; Touloukian, C. E.; Ptak, K.; Gattinoni, L.; Wrzesinski, C.; Hinrichs, C. S.; Kerstann, K. W.; Feigenbaum, L.; Chan, C. C.; Restifo, N. P.
  3. Blood. 2008 112(2): 362-373.
  1. 9.   Identification of JmjC domain-containing UTX and JMJD3 as histone H3 lysine 27 demethylases
  2. Hong, S. H.; Cho, Y. W.; Yu, L. R.; Yu, H.; Veenstra, T. D.; Ge, K.
  3. Proceedings of the National Academy of Sciences of the United States of America. 2007, Nov; 104(47): 18439-18444.
  1. 10.   Identification of novel Wilms' tumor suppressor gene target genes implicated in kidney development
  2. Kim, H. S.; Kim, M. S.; Hancock, A. L.; Harper, J. C. P.; Park, J. Y.; Poy, G.; Perantoni, A. O.; Cam, M.; Malik, K.; Lee, S. B.
  3. Journal of Biological Chemistry. 2007, Jun; 282(22): 16278-16287.
  1. 11.   A feedback transcriptional mechanism controls the level of the arginine/lysine transporter cat-1 during amino acid starvation
  2. Lopez, A. B.; Wang, C. P.; Huang, C. C.; Yaman, I.; Li, Y.; Chakravarty, K.; Johnson, P. F.; Chiang, C. M.; Snider, M. D.; Wek, R. C.; Hatzoglou, M.
  3. Biochemical Journal. 2007, Feb; 402: 163-173.
  1. 12.   Long lasting control and lack of pathogenicity of the attenuated Rev-independent SIV in rhesus macaques
  2. von Gegerfelt, A. S.; Alicea, C.; Valentin, A.; Morrow, M.; van Rompay, K. K. A.; Ayash-Rashkovsky, M.; Markham, P.; Else, J. G.; Marthas, M. L.; Pavlakis, G. N.; Ruprecht, R. M.; Felber, B. K.
  3. Aids Research and Human Retroviruses. 2006, Jun; 22(6): 516-528.
  1. 13.   RTE and CTE mRNA export elements synergistically increase expression of unstable, rev-dependent HIV and SIV mRNAs
  2. Smulevitch, S.; Bear, J.; Alicea, C.; Rosati, M.; Jalah, R.; Zolotukhin, A. S.; Von Gegerfelt, A.; Michalowski, D.; Moroni, C.; Pavlakis, G. N.; Felber, B. K.
  3. Retrovirology. 2006, Jan; 3
  1. 14.   The CYP2E1-humanized transgenic mouse: Role of CYP2E1 in acetaminophen hepatotoxicity
  2. Cheung, C.; Yu, A. M.; Ward, J. M.; Krausz, K. W.; Akiyama, T. E.; Feigenbaum, L.; Gonzalez, F. J.
  3. Drug Metabolism and Disposition. 2005, MAR; 33(3): 449-457.
  1. 15.   Transcriptional regulator CTCF controls human interleukin 1 receptor-associated kinase 2 promoter
  2. Kuzmin, I.; Geil, L.; Gibson, L.; Cavinato, T.; Loukinov, D.; Lobanenkov, V.; Lerman, M. I.
  3. Journal of Molecular Biology. 2005, FEB 18; 346(2): 411-422.
  1. 16.   Human immunodeficiency virus type 1-induced macrophage gene expression includes the p21 gene, a target for viral regulation
  2. Vazquez, N.; Greenwell-Wild, T.; Marinos, N. J.; Swaim, W. D.; Nares, S.; Ott, D. E.; Schubert, U.; Henklein, P.; Orenstein, J. M.; Sporn, M. B.; Wahl, S. M.
  3. Journal of Virology. 2005 79(7): 4479-4491.
  1. 17.   siRNA, miRNA and HIV: promises and challenges
  2. Yeung, M. L.; Bennasser, Y.; Le, S. Y.; Jeang, K. T.
  3. Cell Research. 2005, NOV-DEC; 15(11-12): 935-946.
  1. 18.   Co-operative functions between nuclear factors NF kappa B and CCAT/enhancer-binding protein-beta (C/EBP-beta) regulate the IL-6 promoter in autocrine human prostate cancer cells
  2. Xiao, W. H.; Hodge, D. R.; Wang, L. H.; Yang, X. Y.; Zhang, X. H.; Farrar, W. L.
  3. Prostate. 2004, DEC 1; 61(4): 354-370.
  1. 19.   Transcriptional regulation of Zic3 by heterodimeric AP-1(c-Jun/c-Fos) during Xenopus development
  2. Lee, S. Y.; Lee, F. S.; Moon, J. S.; Kim, J. I.; Park, J. B.; Lee, J. Y.; Park, M. J.; Kim, J.
  3. Experimental and Molecular Medicine. 2004, OCT 31; 36(5): 468-475.
  1. 20.   A distal region in the interferon-gamma gene is a site of epigenetic remodeling and transcriptional regulation by interleukin-2
  2. Bream, J. H.; Hodge, D. L.; Gonsky, R.; Spolski, R.; Leonard, W. J.; Krebs, S.; Targan, S.; Morinobu, A.; O'Shea, J. J.; Young, H. A.
  3. Journal of Biological Chemistry. 2004, SEP 24; 279(39): 41249-41257.
  1. 21.   High attenuation and immunogenicity of a simian immunodeficiency virus expressing a proteolysis-resistant inhibitor of NF-kappa B
  2. Quinto, I.; Puca, A.; Greenhouse, J.; Silvera, P.; Yalley-Ogunro, J.; Lewis, M. G.; Palmieri, C.; Trimboli, F.; Byrum, R.; Adelsberger, J.; Venzon, D.; Chen, X. N.; Scala, G.
  3. Journal of Biological Chemistry. 2004 279(3): 1720-1728.
  1. 22.   Transcriptional coregulator SNURF (RNF4) possesses ubiquitin E3 ligase activity
  2. Hakli, M.; Lorick, K. L.; Weissman, A. M.; Janne, O. A.; Palvimo, J. J.
  3. Febs Letters. 2004 560(1-3): 56-62.
  1. 23.   Identification of beta-carotene 15,15 '-monooxygenase as a peroxisome proliferator-activated receptor target gene
  2. Boulanger, A.; McLemore, P.; Copeland, N. G.; Gilbert, D. J.; Jenkins, N. A.; Yu, S. S.; Gentleman, S.; Redmond, T. M.
  3. Faseb Journal. 2003 17(8): U212-U240.
  1. 24.   Pdcd4 suppresses tumor phenotype in JB6 cells by inhibiting AP- 1 transactivation
  2. Yang, H. S.; Knies, J. L.; Stark, C.; Colburn, N. H.
  3. Oncogene. 2003 22(24): 3712-3720.
  1. 25.   Reduced expression of nuclear cyclic adenosine 5 '-monophospate response element-binding proteins and IFN-gamma promoter function in disease due to an intracellular pathogen
  2. Samten, B.; Ghosh, P.; Yi, A. K.; Weis, S. E.; Lakey, D. L.; Gonsky, R.; Pendurthi, U.; Wizel, B.; Zhang, Y. R.; Zhang, M.; Gong, J. H.; Fernandez, M.; Safi, H.; Vankayalapati, R.; Young, H. A.; Barnes, P. F.
  3. Journal of Immunology. 2002 168(7): 3520-3526.
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