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  1. 1.   The Brighton Collaboration standardized template for collection of key information for benefit-risk assessment of viral vector vaccines
  2. Condit, Richard C; Kim, Denny; Robertson, James S; Excler, Jean-Louis; Gurwith, Marc; Monath, Thomas P; Pavlakis,George; Fast, Patricia E; Smith, Jonathan; Smith, Emily R; Chen, Robert T; Kochhar, Sonali
  3. Vaccine. 2020, NOV 17; 38(49): 7708-7715.
  1. 2.   The Brighton Collaboration standardized template for collection of key information for benefit-risk assessment of viral vector vaccines
  2. Condit, Richard C; Kim, Denny; Robertson, James S; Excler, Jean-Louis; Gurwith, Marc; Monath, Thomas P; Pavlakis,George; Fast, Patricia E; Smith, Jonathan; Smith, Emily R; Chen, Robert T; Kochhar, Sonali
  3. Vaccine. 2020, Sep 06; pii: S0264-410X(20)31030-6.
  1. 3.   The Brighton Collaboration standardized template for collection of key information for benefit-risk assessment of viral vector vaccines
  2. Condit, Richard C; Kim, Denny; Robertson, James S; Excler, Jean-Louis; Gurwith, Marc; Monath, Thomas P; Pavlakis,George; Fast, Patricia E; Smith, Jonathan; Smith, Emily R; Chen, Robert T; Kochhar, Sonali
  3. Vaccine. 2020, Sep 06; pii: S0264-410X(20)31030-6.
  1. 4.   The Brighton Collaboration standardized template for collection of key information for benefit-risk assessment of nucleic acid (RNA and DNA) vaccines
  2. Kim, Denny; Robertson, James S.; Excler, Jean-Louis; Condit, Richard C.; Fast, Patricia E.; Gurwith, Marc; Pavlakis,George; Monath, Thomas P.; Smith, Jonathan; Wood, David; Smith, Emily R.; Chen, Robert T.; Kochhar, Sonali
  3. Vaccine. 2020, JUL 22; 38(34): 5556-5561.
  1. 5.   Fast and accurate modeling of protein-protein interactions by combining template-interface-based docking with flexible refinement
  2. Tuncbag, N.; Keskin, O.; Nussinov, R.; Gursoy, A.
  3. Proteins-Structure Function and Bioinformatics. 2012, Apr; 80(4): 1239-1249.
  1. 6.   Protein structure prediction using a docking-based hierarchical folding scheme
  2. Kifer, I.; Nussinov, R.; Wolfson, H. J.
  3. Proteins-Structure Function and Bioinformatics. 2011, Jun; 79(6): 1759-1773.
  1. 7.   The "Connection" Between HIV Drug Resistance and RNase H
  2. Delviks-Frankenberry, K. A.; Nikolenko, G. N.; Pathak, V. K.
  3. Viruses-Basel. 2010, Jul; 2(7): 1476-1503.
  1. 8.   Discovery of the mitotic selective chromatid segregation phenomenon and its implications for vertebrate development
  2. Armakolas, A.; Koutsilieris, M.; Klar, A. J. S.
  3. Current Opinion in Cell Biology. 2010, Feb; 22(1): 81-87.
  1. 9.   Nucleosomal Fluctuations Govern the Transcription Dynamics of RNA Polymerase II
  2. Hodges, C.; Bintu, L.; Lubkowska, L.; Kashlev, M.; Bustamante, C.
  3. Science. 2009 325(5940): 626-628.
  1. 10.   Constructing templates for protein structure prediction by simulation of protein folding pathways
  2. Kifer, I.; Nussinov, R.; Wolfson, H. J.
  3. Proteins-Structure Function and Bioinformatics. 2008 73(2): 380-394.
  1. 11.   Synthesis of enantiomerically pure (S)-methanocarbaribo uracil nucleoside derivatives for use as antiviral agents and P2Y receptor ligands
  2. Melman, A.; Zhong, M.; Marquez, V. E.; Jacobson, K. A.
  3. Journal of Organic Chemistry. 2008 73(20): 8085-8088.
  1. 12.   Mutations in human immunodeficiency virus type 1 RNase H primer grip enhance 3-Azido-3'-deoxythymidine resistance
  2. Delviks-Frankenberry, K. A.; Nikolenko, G. N.; Barr, R.; Pathak, V. K.
  3. Journal of Virology. 2007, Jul; 81(13): 6837-6845.
  1. 13.   Conformationally constrained analogues of diacylglycerol (DAG). 28. DAG-dioxolanones reveal a new additional interaction site in the C1b domain of PKC delta
  2. Choi, Y.; Pu, Y.; Peach, M. L.; Kang, J. H.; Lewin, N. E.; Sigano, D. M.; Garfield, S. H.; Blumberg, P. M.; Marquez, V. E.
  3. Journal of Medicinal Chemistry. 2007, Jul; 50(15): 3465-3481.
  1. 14.   Biophysical studies of DNA modified with conformationally constrained nucleotides: comparison of 2 '-exo (north) and 3 '-exo (south) 'locked' templates
  2. Maderia, M.; Shenoy, S.; Van, Q. N.; Marquez, V. E.; Barchi, J. J.
  3. Nucleic Acids Research. 2007, Mar; 35(6): 1978-1991.
  1. 15.   Anatomy of Escherichia coli sigma(70) promoters
  2. Shultzaberger, R. K.; Chen, Z. H.; Lewis, Janine; Schneider, Tom
  3. Nucleic Acids Research. 2007, Feb; 35(3): 771-788.
  1. 16.   Exploiting structurally diverse nucleoside analogs as probes of reverse transcription complexes
  2. Rausch, J. W.; Le Grice, S. F. J.
  3. Current HIV Research. 2007, Jan; 5(1): 11-22.
  1. 17.   Conformationally constrained analogues of diacylglycerol. 26. Exploring the chemical space surrounding the C1 domain of protein kinase C with DAG-lactones containing aryl groups at the sn-1 and sn-2 positions
  2. Kang, J. H.; Benzaria, S.; Sigano, D. M.; Lewin, N. E.; Pu, Y. M.; Peach, M. L.; Blumberg, P. M.; Marquez, V. E.
  3. Journal of Medicinal Chemistry. 2006, Jun; 49(11): 3185-3203.
  1. 18.   Effects of mutations in the human immunodeficiency virus type 1 gag gene on RNA packaging and recombination
  2. Nikolaitchik, O.; Rhodes, T. D.; Ott, D.; Hu, W. S.
  3. Journal of Virology. 2006, MAY; 80(10): 4691-4697.
  1. 19.   Examining Ty3 polypurine tract structure and function by nucleoside analog interference
  2. Dash, C.; Marino, J. P.; Le Grice, S. F. J.
  3. Journal of Biological Chemistry. 2006, FEB 3; 281(5): 2773-2783.
  1. 20.   WholePathwayScope: a comprehensive pathway-based analysis tool for high-throughput data
  2. Yi, M.; Horton, J. D.; Cohen, J. C.; Hobbs, H. H.; Stephens, R. M.
  3. Bmc Bioinformatics. 2006, JAN 19; 7
  1. 21.   A base-specific recognition signal in the 5 ' consensus sequence of rotavirus plus-strand RNAs promotes replication of the double-stranded RNA genome segments
  2. Tortorici, M. A.; Shapiro, R. A.; Patton, J. T.
  3. Rna-a Publication of the Rna Society. 2006, JAN; 12(1): 133-146.
  1. 22.   Crystal structures for HIV-1 reverse transcriptase in complexes with three pyridinone derivatives: A new class of non-nucleoside inhibitors effective against a broad range of drug-resistant strains
  2. Himmel, D. M.; Das, K.; Clark, A. D.; Hughes, S. H.; Benjahad, A.; Oumouch, S.; Guillemont, J.; Coupa, S.; Poncelet, A.; Csoka, I.; Meyer, C.; Andries, K.; Nguyen, C. H.; Grierson, D. S.; Arnold, E.
  3. Journal of Medicinal Chemistry. 2005, DEC 1; 48(24): 7582-7591.
  1. 23.   An estrogen receptor chimera senses ligands by nuclear translocation
  2. Martinez, E. D.; Rayasam, G. V.; Dull, A. B.; Walker, D. A.; Hager, G. L.
  3. Journal of Steroid Biochemistry and Molecular Biology. 2005, DEC; 97(4): 307-321.
  1. 24.   Tubulin assembly, taxoid site binding, and cellular effects of the microtubule-stabilizing agent dictyostatin
  2. Madiraju, C.; Edler, M. C.; Hamel, E.; Raccor, B. S.; Balachandran, R.; Zhu, G. Y.; Giuliano, K. A.; Vogt, A.; Shin, Y. S.; Fournier, J. H.; Fukui, Y. H.; Bruckner, A. M.; Curran, D. P.; Day, B. W.
  3. Biochemistry. 2005, NOV 15; 44(45): 15053-15063.
  1. 25.   Understanding how the herpes thymidine kinase orchestrates optimal sugar and nucleobase conformations to accommodate its substrate at the active site: A chemical approach
  2. Marquez, V. E.; Choi, Y.; Comin, M. J.; Russ, P.; George, C.; Huleihel, M.; Ben-Kasus, T.; Agbaria, R.
  3. Journal of the American Chemical Society. 2005, NOV 2; 127(43): 15145-15150.
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