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  1. 1.   Identifying and characterizing recently transmitted viruses
  2. Keele, B. F.
  3. Current opinion in HIV and AIDS. 2010, Jul; 5(4): 327-34.
  1. 2.   The prediction of the wild-type telomerase RNA pseudoknot structure and the pivotal role of the bulge in its formation
  2. Yingling, Y. G.; Shapiro, B. A.
  3. Journal of Molecular Graphics & Modelling. 2006, Oct; 25(2): 261-274.
  1. 3.   Periodicity, planarity, residual dipolar coupling, and structures
  2. Walsh, J. D.; Wang, Y. X.
  3. Journal of Magnetic Resonance. 2005, MAY; 174(1): 152-162.
  1. 4.   Detection of C ' C-alpha correlations in proteins using a new time- and sensitivity-optimal experiment
  2. Lee, D.; Vogeli, B.; Pervushin, K.
  3. Journal of Biomolecular Nmr. 2005, APR; 31(4): 273-278.
  1. 5.   Theoretical prediction of the catalytic properties for substituted salen-manganese compounds
  2. Abashkin, Y. G.; Burt, S. K.
  3. Abstracts of Papers of the American Chemical Society. 2005, MAR 13; 229(585-INOR, Part 1): U1052-U1052.
  1. 6.   (salen)Mn-III compounds as nonpeptidyl mimics of catalase. Mechanism-based tuning of catalase activity: A theoretical study
  2. Abashkin, Y. G.; Burt, S. K.
  3. Inorganic Chemistry. 2005, MAR 7; 44(5): 1425-1432.
  1. 7.   Three-dimensional structure of a macromolecular assembly that regulates type III secretion in yersinia pestis
  2. Schubot, F. D.; Jackson, M. W.; Penrose, K. J.; Cherry, S.; Tropea, J. E.; Plano, G. V.; Waugh, D. S.
  3. Journal of Molecular Biology. 2005, MAR 4; 346(4): 1147-1161.
  1. 8.   Genetic recombination of human immunodeficiency virus type 1 in one round of viral replication: Effects of genetic distance, target cells, accessory genes, and lack of high negative interference in crossover events
  2. Rhodes, T. D.; Nikolaitchik, O.; Chen, J. B.; Powell, D.; Hu, W. S.
  3. Journal of Virology. 2005, FEB; 79(3): 1666-1677.
  1. 9.   Recognition of binding patterns common to a set of protein structures
  2. Shatsky, M.; Shulman-Peleg, A.; Nussinov, R.; Wolfson, H. J.
  3. Research in Computational Molecular Biology, Proceedings. 2005 3500: 440-455.
  1. 10.   Theory and methodology for utilizing genes as biomarkers to determine potential biological mixtures
  2. Shrestha, S.; Smith, M. W.; Beaty, T. H.; Strathdee, S. A.
  3. Annals of Epidemiology. 2005, JAN; 15(1): 29-38.
  1. 11.   Switches in bacteriophage lambda development
  2. Oppenheim, A. B.; Kobiler, O.; Stavans, J.; Court, D. L.; Adhya, S.
  3. Annual Review of Genetics. 2005 39: 409-429.
  1. 12.   Theoretical study of the low lying electronic states of oxoX(salen) (X = Mn, Mn-, Fe, and Cr-) complexes
  2. Ivanic, J.; Collins, J. R.; Burt, S. K.
  3. Journal of Physical Chemistry A. 2004 108(12): 2314-2323.
  1. 13.   FlexProt: Alignment of flexible protein structures without a predefinition of hinge regions
  2. Shatsky, M.; Nussinov, R.; Wolfson, H. J.
  3. Journal of Computational Biology. 2004 11(1): 83-106.
  1. 14.   Peptide sequence and amyloid formation: Molecular simulations and experimental study of a human islet amyloid polypeptide fragment and its analogs
  2. Zanuy, D.; Porat, Y.; Gazit, E.; Nussinov, R.
  3. Structure. 2004 12(3): 439-455.
  1. 15.   Looking for cancer clues in publicly accessible databases
  2. Medjahed, D.; Lemkin, P. F.; Smythers, G. W.; Munroe, D. J.
  3. Comparative and Functional Genomics. 2004 5(2): 196-200.
  1. 16.   Mn(salen)-catalyzed epoxidation reaction as a multi-channel process. Electronic tuning of asymmetric catalysis: A theoretical study
  2. Abashkin, Y. G.; Burt, S. K.
  3. Abstracts of Papers of the American Chemical Society. 2003 226(Part 1): U753-U753.
  1. 17.   Theoretical study of the acidic hydrolysis of adendsine in aqueous solution by density functional theory
  2. Sun, G.; Nicklaus, M. C.; Marquez, V. E.
  3. Abstracts of Papers of the American Chemical Society. 2003 225(Part 1): U769-U769.
  1. 18.   Theoretical study on the roles of divalent metal-ions in GTP hydrolysis
  2. Wang, Y. N.; Collins, J. R.; Burt, S. K.
  3. Abstracts of Papers of the American Chemical Society. 2003 226(Part 1): U442-U442.
  1. 19.   Saccharomyces cerevisiae phosphoenolpyruvate carboxykinase: theoretical and experimental study of the effect of glutamic acid 284 on the protonation state of lysine 213
  2. Gonzalez-Nilo, F. D.; Krautwurst, H.; Yevenes, A.; Cardemil, E.; Cachau, R.
  3. Biochimica Et Biophysica Acta-Proteins and Proteomics. 2002 1599(1-2): 65-71.
  1. 20.   Homology modeling and molecular dynamics simulations of lymphotactin
  2. Buyong, Xiong J.; Lubkowski, J.; Nussinov, R.
  3. Protein Science. 2000 9(11): 2192-2199.
  1. 21.   Density functional and coupled-cluster calculations of isodesmic reactions involving fluorine oxides
  2. Ventura, O. N.; Cachau, R. E.; Kieninger, M.
  3. Chemical Physics Letters. 1999 301(3-4): 331-335.
  1. 22.   Density functional theory is more accurate than coupled-cluster theory in the study of the thermochemistry of species containing the F-O bond
  2. Ventura, O. N.; Kieninger, M.; Cachau, R. E.
  3. Journal of Physical Chemistry. 1999 103(1): 147-151.
  1. 23.   Cyclopropane-Derived Peptidomimetics - Design, Synthesis, Evaluation, and Structure of Novel Hiv-1 Protease Inhibitors
  2. Martin, S. F.; Dorsey, G. O.; Gane, T.; Hillier, M. C.; Kessler, H.; Baur, M.; Matha, B.; Erickson, J. W.; Bhat, T. N.; Munshi, S.; Gulnik, S. V.; Topol, I. A.
  3. Journal of Medicinal Chemistry. 1998 41(10): 1581-1597.
  1. 24.   Early viral replication dynamics predict clinical course in SIV infected macaques
  2. Lifson, J.; Nowak, M.; Kinter, A.; Vasquez, G.; Rossio, J.; Goldstein, S.; Schneider, D.; Elkins, W. R.; Brown, C.; Wiltrout, T.; Hardy, E.; Wahl, L.; Williams, J.; Zasloff, M.; Fauci, A. S.; Hirsch, V. M.
  3. Conference on Retroviruses and Opportunistic Infections. 1997, 136 (abstract no. 390).
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