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  1. 1.   The differential interactomes of the KRAS splice variants identify BIRC6 as a ubiquitin ligase for KRAS4A
  2. Kochen Rossi, Juan; Nuevo-Tapioles, Cristina; O'Keefe, Rachel A; Hunkeler, Moritz; Schmoker, Anna M; Fissore-O'Leary, Mercedes; Su, Wenjuan; Ahearn, Ian M; Branco, Cristina; Cheong, Hakyung; Esposito,Dom; Clotea, Ioana; Ueberheide, Beatrix; Fischer, Eric S; Philips, Mark R
  3. Cell Reports. 2024, Dec 19; 44(1): 115087.
  1. 2.   Autoinhibition of ubiquitin-specific protease 8: insights into domain interactions and mechanisms of regulation
  2. Caba, Cody; Black, Megan; Liu, Yujue; DaDalt, Ashley A; Mallare, Josh; Fan,Lixin; Harding, Rachel J; Wang, Yunxin; Vacratsis, Panayiotis O; Huang, Rui; Zhuang, Zhihao; Tong, Yufeng
  3. The Journal of Biological Chemistry. 2024, Aug 28; 107727.
  1. 3.   K128 ubiquitination constrains RAS activity by expanding its binding interface with GAP proteins
  2. Magits, Wout; Steklov, Mikhail; Jang,Hyunbum; Sewduth, Raj N; Florentin, Amir; Lechat, Benoit; Sheryazdanova, Aidana; Zhang, Mingzhen; Simicek, Michal; Prag, Gali; Nussinov,Ruth; Sablina, Anna
  3. The EMBO Journal. 2024, Jun 10;
  1. 4.   SARS-CoV-2 papain-like protease (PLpro) plays multiple roles in regulating cellular proteins in the endoplasmic reticulum
  2. Yang,Mei; Mariano,Jennifer; Su, Rebecca; Smith, Christopher E; Das,Sudipto; Gill, Catherine; Andresson,Thorkell; Loncarek,Jadranka; Tsai,Yien Che; Weissman,Allan
  3. The Journal of Biological Chemistry. 2023, Dec; 299(12): 105346.
  1. 5.   Structure-guided bifunctional molecules hit a DEUBAD-lacking hRpn13 species upregulated in multiple myeloma
  2. Lu, Xiuxiu; Sabbasani, Venkata R.; Osei-Amponsa, Vasty; Evans, Christine N.; King, Julianna C.; Tarasov, Sergey G.; Dyba, Marzena; Das, Sudipto; Chan, King C.; Schwieters, Charles D.; Choudhari, Sulbha; Fromont, Caroline; Zhao, Yongmei; Tran, Bao; Chen, Xiang; Matsuo, Hiroshi; Andresson, Thorkell; Chari, Raj; Swenson, Rolf E.; Tarasova, Nadya I.; Walters, Kylie J.
  3. Nature Communications. 2021, Dec 16; 12(1):
  1. 6.   Phosphorylation of SMURF2 by ATM exerts a negative feedback control of DNA damage response
  2. Tang, Liu-Ya; Thomas, Adam; Zhou, Ming; Zhang, Ying E
  3. The Journal of biological chemistry. 2020, Dec 25; 295(52): 18485-18493.
  1. 7.   The Role of Conformational Dynamics in the Recognition and Regulation of Ubiquitination
  2. Khago, Domarin; Fucci,Ian; Byrd,Robert
  3. Molecules (Basel, Switzerland). 2020, Dec 15; 25(24):
  1. 8.   Proteasome interaction with ubiquitinated substrates: from mechanisms to therapies
  2. Chen,Xiang; Htet, Zaw Min; Lopez-Alfonzo, Erika; Martin, Andreas; Walters,Kylie
  3. The FEBS journal. 2020, DEC 11;
  1. 9.   Increased Protein Insolubility in Brains From a Subset of Patients With Schizophrenia
  2. Nucifora, Leslie G; MacDonald, Matthew L; Lee, Brian J; Peters, Matthew E; Norris, Alexis L; Orsburn, Benjamin C; Yang, Kun; Gleason, Kelly; Margolis, Russell L; Pevsner, Jonathan; Tamminga, Carol A; Sweet, Robert A; Ross, Christopher A; Sawa, Akira; Nucifora, Frederick C
  3. The American journal of psychiatry. 2019, SEP; 176(9): 730-743.
  1. 10.   Increased Protein Insolubility in Brains From a Subset of Patients With Schizophrenia
  2. Nucifora, Leslie; MacDonald, Matthew; Lee, Brian; Peters, Matthew; Norris, Alexis; Orsburn, Benjamin; Yang, Kun; Gleason, Kelly; Margolis, Russell; Pevsner, Jonathan; Tamminga, Carol; Sweet, Robert; Ross, Christopher; Sawa, Akira; Nucifora, Frederick
  3. BIOLOGICAL PSYCHIATRY. 2019, MAY 15; 85(10): S278-S278.
  1. 11.   Protein Synthesis Inhibition Activity of Mesothelin Targeting Immunotoxin LMB-100 Decreases Concentrations of Oncogenic Signaling Molecules and Secreted Growth Factors
  2. El-Behaedi, Salma; Landsman, Rebekah; Rudloff, Michael; Kolyvas, Emily; Albalawy, Rakan; Zhang, Xianyu; Bera, Tapan; Collins, Keith; Kozlov, Serguei; Alewine, Christine
  3. Toxins. 2018, Nov; 10(11): pii: E447.
  1. 12.   The Ubiquitin Ligase (E3) Psh1p Is Required for Proper Segregation of both Centromeric and Two-Micron Plasmids in Saccharomyces cerevisiae
  2. Metzger, Meredith; Scales, Jessica L.; Dunklebarger, Mitchell F.; Weissman, Allan
  3. G3-GENES GENOMES GENETICS. 2017, Nov 06; 7(11): 3731-3743.
  1. 13.   The Proteasome Ubiquitin Receptor hRpn13 and Its Interacting Deubiquitinating Enzyme Uch37 Are Required for Proper Cell Cycle Progression
  2. Randles, L.; Anchoori, R. K.; Roden, R. B.; Walters, K. J.
  3. The Journal of biological chemistry. 2016, 15-Apr; 291(16): 8773-83.
  1. 14.   TrkA in vivo function is negatively regulated by ubiquitination
  2. Kiris, E.; Wang, T.; Yanpallewar, S.; Dorsey, S. G.; Becker, J.; Bavari, S.; Palko, M. E.; Coppola, V.; Tessarollo, L.
  3. Journal of Neuroscience. 2014, 12-Mar; 34(11): 4090-8.
  1. 15.   A tumor suppressor function of Smurf2 associated with controlling chromatin landscape and genome stability through RNF20
  2. Blank, M.; Tang, Y.; Yamashita, M.; Burkett, S. S.; Cheng, S. Y.; Zhang, Y. E.
  3. Nature Medicine. 2012, Feb; 18(2): 227-234.
  1. 16.   Dendritic Cells from Humans with Hypomorphic Mutations in IKBKG/NEMO Have Impaired Mitogen-Activated Protein Kinase Activity
  2. Ma, C. A.; Wang, H. Y.; Temmerman, S.; Zhao, Y. G.; Wu, L. M.; Hornung, R. L.; Wara, D.; Jain, A.
  3. Human Mutation. 2011, Mar; 32(3): 318-324.
  1. 17.   Working on a chain: E3s ganging up for ubiquitylation
  2. Metzger, M. B.; Weissman, A. M.
  3. Nature Cell Biology. 2010, Dec; 12(12): 1124-1126.
  1. 18.   Allosteric activation of E2-RING finger-mediated ubiquitylation by a structurally defined specific E2-binding region of gp78
  2. Das, R.; Mariano, J.; Tsai, Y. C.; Kalathur, R. C.; Kostova, Z.; Li, J.; Tarasov, S. G.; McFeeters, R. L.; Altieri, A. S.; Ji, X.; Byrd, R. A.; Weissman, A. M.
  3. Molecular Cell. 2009, Jun 26; 34(6): 674-85.
  1. 19.   Casein kinase 1 alpha governs antigen-receptor-induced NF-kappa B activation and human lymphoma cell survival
  2. Bidere, N.; Ngo, V. N.; Lee, J.; Collins, C.; Zheng, L. X.; Wan, F. Y.; Davis, R. E.; Lenz, G.; Anderson, D. E.; Arnoult, D.; Vazquez, A.; Sakai, K.; Zhang, J.; Meng, Z. J.; Veenstra, T. D.; Staudt, L. M.; Lenardo, M. J.
  3. Nature. 2009 458(7234): 92-U7.
  1. 20.   The Origin of Allosteric Functional Modulation: Multiple Pre-existing Pathways
  2. del Sol, A.; Tsai, C. J.; Ma, B. Y.; Nussinov, R.
  3. Structure. 2009 17(8): 1042-1050.
  1. 21.   Nedd4 mediates agonist-dependent ubiquitination, lysosomal targeting, and degradation of the beta(2)-adrenergic receptor
  2. Shenoy, S. K.; Xiao, K. H.; Venkataramanan, V.; Snyder, P. M.; Freedman, N. J.; Weissman, A. M.
  3. Journal of Biological Chemistry. 2008 283(32): 22166-22176.
  1. 22.   Quantitative assessment of the p53-Mdm2 feedback loop using protein lysate microarrays
  2. Ramalingam, S.; Honkanen, P.; Young, L.; Shimura, T.; Austin, J.; Steeg, P. S.; Nishizuka, S.
  3. Cancer Research. 2007, Jul; 67(13): 6247-6252.
  1. 23.   Ni(II) affects ubiquitination of core histones H2B and H2A
  2. Karaczyn, A. A.; Golebiowski, F.; Kasprzak, K. S.
  3. Experimental Cell Research. 2006, Oct; 312(17): 3252-3259.
  1. 24.   Structural basis for ubiquitin recognition and autoubiquitination by Rabex-5
  2. Lee, S.; Tsai, Y. C.; Mattera, R.; Smith, W. J.; Kostelansky, M. S.; Weissman, A. M.; Bonifacino, J. S.; Hurley, J. H.
  3. Nature Structural & Molecular Biology. 2006, MAR; 13(3): 264-271.
  1. 25.   Suppression of p65 phosphorylation coincides with inhibition of I kappa B alpha polyubiquitination and degradation
  2. Hu, J.; Haseebuddin, M.; Young, M.; Colburn, N. H.
  3. Molecular Carcinogenesis. 2005, DEC; 44(4): 274-284.
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