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  1. 1.   The mechanism driving a solid-solid phase transition in a biomacromolecular crystal
  2. Ramakrishnan, Saminathan; Stagno,Jason; Heinz,Will; Zuo, Xiaobing; Yu,Ping; Wang,Yun-Xing
  3. IUCrJ. 2021, Jul 01; 8(Pt 4): 655-664.
  1. 2.   Interdomain Stabilization Impairs CD4 Binding and Improves Immunogenicity of the HIV-1 Envelope Trimer
  2. Zhang, Peng; Gorman, Jason; Geng, Hui; Liu, Qingbo; Lin, Yin; Tsybovsky, Yaroslav; Go, Eden P; Dey, Barna; Andine, Tsion; Kwon, Alice; Patel, Mit; Gururani, Deepali; Uddin, Ferzan; Guzzo, Christina; Cimbro, Raffaello; Miao, Huiyi; McKee, Krisha; Chuang, Gwo-Yu; Martin, Loïc; Sironi, Francesca; Malnati, Mauro S; Desaire, Heather; Berger, Edward A; Mascola, John R; Dolan, Michael A; Kwong, Peter D; Lusso, Paolo
  3. Cell Host & Microbe. 2018, Jun 13; 23(6): 832-844.e6.
  1. 3.   Structure of severe acute respiratory syndrome coronavirus receptor-binding domain complexed with neutralizing antibody
  2. Prabakaran, P.; Gan, J. H.; Feng, Y.; Zhu, Z. Y.; Choudhry, V.; Xiao, X. D.; Ji, X. H.; Dimitrov, D. S.
  3. Journal of Biological Chemistry. 2006, JUN 9; 281(23): 15829-15836.
  1. 4.   Optimization of multiple-sequence alignment based on multiple-structure alignment
  2. Shatsky, M.; Nussinov, R.; Wolfson, H. J.
  3. Proteins-Structure Function and Bioinformatics. 2006, JAN 1; 62(1): 209-217.
  1. 5.   Multifunctional roles of the conserved arg residues in the second region of homology of p97/valosin-containing protein
  2. Wang, Q.; Song, C. C.; Irizarry, L.; Dai, R. M.; Zhang, X. D.; Li, C. C. H.
  3. Journal of Biological Chemistry. 2005, DEC 9; 280(49): 40515-40523.
  1. 6.   Release factors eRF1 and RF2: A universal mechanism controls the large conformational changes
  2. Ma, B. Y.; Nussinov, R.
  3. Biophysical Journal. 2005, JAN; 88(1, Part 2, Suppl. S): 210A-210A.
  1. 7.   Substrate-induced conformational changes in glycosyltransferases
  2. Qasba, P. K.; Ramakrishnan, B.; Boeggeman, E.
  3. Trends in Biochemical Sciences. 2005, JAN; 30(1): 53-62.
  1. 8.   Release factors eRF1 and RF2 - A universal mechanism controls the large conformational changes
  2. Ma, B. Y.; Nussinov, R.
  3. Journal of Biological Chemistry. 2004, DEC 17; 279(51): 53875-53885.
  1. 9.   Is allostery an intrinsic property of all dynamic proteins?
  2. Gunasekaran, K.; Ma, B. Y.; Nussinov, R.
  3. Proteins-Structure Function and Bioinformatics. 2004, NOV 15; 57(3): 433-443.
  1. 10.   Effect of the Met344His mutation on the conformational dynamics of bovine beta-1,4-galactosyltransferase: Crystal structure of the Met344His mutant in complex with chitobiose
  2. Ramakrishnan, B.; Boeggeman, E.; Qasba, P. K.
  3. Biochemistry. 2004, OCT 5; 43(39): 12513-12522.
  1. 11.   Virus entry: Molecular mechanisms and biomedical applications
  2. Dimitrov, D. S.
  3. Nature Reviews Microbiology. 2004 2(2): 109-122.
  1. 12.   Essential roles of a dynamic loop in the catalysis of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase
  2. Blaszczyk, J.; Li, Y.; Wu, Y.; Shi, G. B.; Ji, X. H.; Yan, H. G.
  3. Biochemistry. 2004 43(6): 1469-1477.
  1. 13.   Nonnucleoside inhibitor binding affects the interactions of the fingers subdomain of human immunodeficiency virus type 1 reverse transcriptase with DNA
  2. Peletskaya, E. N.; Kogon, A. A.; Tuske, S.; Arnold, E.; Hughes, S. H.
  3. Journal of Virology. 2004 78(7): 3387-3397.
  1. 14.   Molecular motions and conformational changes of HPPK
  2. Keskin, O.; Ji, X.; Blaszcyk, J.; Covell, D. G.
  3. Proteins-Structure Function and Genetics. 2002 49(2): 191-205.
  1. 15.   Crystal structure of beta 1,4-galactosyltransferase complex with UDP-Gal reveals an oligosaccharide acceptor binding site
  2. Ramakrishnan, B.; Balaji, P. V.; Qasba, P. K.
  3. Journal of Molecular Biology. 2002 318(2): 491-502.
  1. 16.   Crystal structure of lactose synthase reveals a large conformational change in its catalytic component, the beta 1,4- galactosyltransferase-1
  2. Ramakrishnan, B.; Qasba, P. K.
  3. Journal of Molecular Biology. 2001 310(1): 205-218.
  1. 17.   Flexible structural comparison allowing hinge-bending, swiveling motions
  2. Verbitsky, G.; Nussinov, R.; Wolfson, H.
  3. Proteins. 1999 34(2): 232-254.
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