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  1. 1.   ShiftScan: A tool for rapid analysis of high-throughput differential scanning fluorimetry data and compound prioritization
  2. Waterworth, Samantha C; Shenoy, Shilpa R; Sharma, Nirmala D; Wolcott,Chris; Donohue,Duncan; O'Keefe,Barry; Beutler,John
  3. Protein Science : a publication of the Protein Society. 2025, Mar; 34(3): e70055.
  1. 2.   Comprehensive proteogenomic characterization of rare kidney tumors
  2. Li, Ginny Xiaohe; Chen, Lijun; Hsiao, Yi; Mannan, Rahul; Zhang, Yuping; Luo, Jie; Petralia, Francesca; Cho, Hanbyul; Hosseini, Noshad; Leprevost, Felipe da Veiga; Calinawan, Anna; Li, Yize; Anand, Shankara; Dagar, Aniket; Geffen, Yifat; Kumar-Sinha, Chandan; Chugh, Seema; Le, Anne; Ponce, Sean; Guo, Shenghao; Zhang, Cissy; Schnaubelt, Michael; Al Deen, Nataly Naser; Chen, Feng; Caravan, Wagma; Houston, Andrew; Hopkins, Alex; Newton, Chelsea J; Wang, Xiaoming; Polasky, Daniel A; Haynes, Sarah; Yu, Fengchao; Jing, Xiaojun; Chen, Siqi; Robles, Ana I; Mesri, Mehdi; Thiagarajan,Mathangi; An, Eunkyung; Getz, Gad A; Linehan, W Marston; Hostetter, Galen; Jewell, Scott D; Chan, Daniel W; Wang, Pei; Omenn, Gilbert S; Mehra, Rohit; Ricketts, Christopher J; Ding, Li; Chinnaiyan, Arul M; Cieslik, Marcin P; Dhanasekaran, Saravana M; Zhang, Hui; Nesvizhskii, Alexey I
  3. Cell Reports. Medicine. 2024, May 21; 5(5): 101547.
  1. 3.   Gene network landscape of mouse splenocytes reveals integrin complex as the A151 ODN-responsive hub molecule in the immune transcriptome
  2. Yazar, Volkan; Yilmaz, Ismail Cem; Bulbul, Artun; Klinman, Dennis M; Gursel, Ihsan
  3. Molecular Therapy. Nucleic Acids. 2023, Mar 14; 31: 553-565.
  1. 4.   Thermal Shift Assay for Small GTPase Stability Screening: Evaluation and Suitability
  2. Kopra, Kari; Valtonen, Salla; Mahran, Randa; Kapp, Jonas N; Hassan, Nazia; Gillette,Bill; Dennis, Bryce; Li, Lianbo; Westover, Kenneth D; Plückthun, Andreas; Härmä, Harri
  3. International Journal of Molecular Sciences. 2022, Jun 26; 23(13):
  1. 5.   Differential MUC22 expression by epigenetic alterations in human lung squamous cell carcinoma and adenocarcinoma
  2. Lin, Shuye; Tian, Cuimeng; Li, Jianhui; Liu, Bin; Ma, Teng; Chen,Keqiang; Gong,Wang; Wang,Jiming; Huang, Jiaqiang
  3. Oncology Reports. 2021, May; 45(5):
  1. 6.   4EHP and GIGYF1/2 Mediate Translation-Coupled Messenger RNA Decay
  2. Weber, Ramona; Chung, Min-Yi; Keskeny, Csilla; Zinnall, Ulrike; Landthaler, Markus; Valkov,Eugene; Izaurralde, Elisa; Igreja, Catie
  3. CELL REPORTS. 2020, OCT 13; 33(2):
  1. 7.   The Natural Product Butylcycloheptyl Prodiginine Binds Pre-miR-21, Inhibits Dicer-Mediated Processing of Pre-miR-21, and Blocks Cellular Proliferation
  2. Matarlo, Joe S; Haugh Krumpe,Lauren; Heinz,Will; Oh, Daniel; Shenoy, Shilpa R; Thomas,Cheryl; Goncharova,Katya; Lockett,Stephen; O'Keefe,Barry
  3. Cell chemical biology. 2019, Aug 15; 26(8): 1133-1142.e4.
  1. 8.   Transcriptomic profiling and quantitative high-throughput (qHTS) drug screening of CDH1 deficient hereditary diffuse gastric cancer (HDGC) cells identify treatment leads for familial gastric cancer.
  2. Chen, Ina; Mathews-Greiner, Lesley; Li, Dandan; Abisoye-Ogunniyan, Abisola; Ray, Satyajit; Bian, Yansong; Shukla, Vivek; Zhang, Xiaohu; Guha, Raj; Thomas, Craig; Gryder, Berkley; Zacharia, Athina; Beane, Joal D; Ravichandran, Sarangan; Ferrer, Marc; Rudloff, Udo
  3. Journal of translational medicine. 2017, May 01; 15(1): 92.
  1. 9.   Growth rate regulation in Escherichia coli
  2. Jin, D. J.; Cagliero, C.; Zhou, Y. N.
  3. FEMS Microbiology Reviews. 2012, Mar; 36(2): 269-287.
  1. 10.   Regulation of Trafficking of Activated TrkA Is Critical for NGF-Mediated Functions
  2. Yu, T.; Calvo, L.; Anta, B.; Lopez-Benito, S.; Southon, E.; Chao, M. V.; Tessarollo, L.; Arevalo, J. C.
  3. Traffic. 2011, Apr; 12(4): 521-534.
  1. 11.   Synthesis and Discovery of Water-Soluble Microtubule Targeting Agents that Bind to the Colchicine Site on Tubulin and Circumvent Pgp Mediated Resistance
  2. Gangjee, A.; Zhao, Y.; Lin, L.; Raghavan, S.; Roberts, E. G.; Risinger, A. L.; Hamel, E.; Mooberry, S. L.
  3. Journal of Medicinal Chemistry. 2010, Nov; 53(22): 8116-8128.
  1. 12.   In vitro comparison of O4-benzylfolate modulated, BCNU-induced toxicity in human bone marrow using CFU-GM and tumor cell lines
  2. Behrsing, H. P.; Furniss, M. J.; Robillard, K. A.; Tomaszewski, J. E.; Parchment, R. E.
  3. Cancer Chemotherapy and Pharmacology. 2010, May; 65(6): 1083-1091.
  1. 13.   Impact of Feedback Phosphorylation and Raf Heterodimerization on Normal and Mutant B-Raf Signaling
  2. Ritt, D. A.; Monson, D. M.; Specht, S. I.; Morrison, D. K.
  3. Molecular and Cellular Biology. 2010, Feb; 30(3): 806-819.
  1. 14.   A microarray analysis for differential gene expression in the soybean genome using Bioconductor and R
  2. Alvord, W. G.; Roayaei, J. A.; Quinones, O. A.; Schneider, K. T.
  3. Briefings in Bioinformatics. 2007, Nov; 8(6): 415-431.
  1. 15.   DNA damage, superoxide, and mutant K-ras in human lung adenocarcinoma cells
  2. Romanowska, M.; Maciag, A.; Smith, A. L.; Fields, J. R.; Fornwald, L. W.; Kikawa, K. D.; Kasprzak, K. S.; Anderson, L. M.
  3. Free Radical Biology and Medicine. 2007, Oct; 43(8): 1145-1155.
  1. 16.   Down-regulation of insulin-like growth factor binding protein-5 (IGFBP-5): Novel marker for cervical carcinogenesis
  2. Miyatake, T.; Ueda, Y.; Nakashima, R.; Yoshino, K.; Kimura, T.; Murata, T.; Nomura, T.; Fujita, M.; Buzard, G. S.; Enomoto, T.
  3. International Journal of Cancer. 2007, May; 120(10): 2068-2077.
  1. 17.   Persistent human papillomavirus infection is associated with a generalized decrease in immune responsiveness in older women
  2. Garcia-Pineres, A. J.; Hildesheim, A.; Herrero, R.; Trivett, M.; Williams, M.; Atmetlla, I.; Ramirez, M.; Villegas, M.; Schiffman, M.; Rodriguez, A. C.; Burk, R. D.; Hildesheim, M.; Freer, E.; Bonilla, J.; Bratti, C.; Berzofsky, J. A.; Pinto, L. A.
  3. Cancer Research. 2006, Nov; 66(22): 11070-11076.
  1. 18.   The NCI60 human tumour cell line anticancer drug screen
  2. Shoemaker, R. H.
  3. Nature Reviews Cancer. 2006, Oct; 6(10): 813-823.
  1. 19.   Identification of molecular markers for endometriosis in blood lymphocytes by using deoxyribonucleic acid microarrays
  2. Flores, I.; Rivera, E.; Mousses, S.; Chen, Y. D.; Rozenblum, E.
  3. Fertility and Sterility. 2006, Jun; 85(6): 1676-1683.
  1. 20.   Comprehensive analysis of pathway or functionally related gene expression in the National Cancer Institute's anticancer screen
  2. Huang, R.; Wallqvist, A.; Covell, D. G.
  3. Genomics. 2006, MAR; 87(3): 315-328.
  1. 21.   Increased oxidation and degradation of cytosolic proteins in alcohol-exposed mouse liver and hepatoma cells
  2. Kim, B. J.; Hood, B. L.; Aragon, R. A.; Hardwick, J. R.; Conrads, T. R.; Veenstra, T. D.; Song, B. J.
  3. Proteomics. 2006, FEB; 6(4): 1250-1260.
  1. 22.   Structural differentiation of the HIV-1 poly(A) signals
  2. Gee, A. H.; Kasprzak, W.; Shapiro, B. A.
  3. Journal of Biomolecular Structure & Dynamics. 2006, FEB; 23(4): 417-428.
  1. 23.   Multicolor fluorescence-based approaches for imaging cytokine-induced alterations in the neovascularization, growth, metastasis, and apoptosis of murine neuroblastoma tumors
  2. Stauffer, J. K.; Khan, T.; Salcedo, R.; Hixon, J. A.; Lincoln, E.; Back, T. C.; Wigginton, J. M.
  3. Journal of Immunotherapy. 2006, MAR-APR; 29(2): 151-164.
  1. 24.   Antitumor activity and distribution of pyrroloiminoquinones in the sponge genus Zyzzya
  2. Dijoux, M. G.; Schnabel, P. C.; Hallock, Y. F.; Boswell, J. L.; Johnson, T. R.; Wilson, J. A.; Irel, C. M.; van Soest, R.; Boyd, M. R.; Barrows, L. R.; Cardellina, J. H.
  3. Bioorganic & Medicinal Chemistry. 2005, NOV 1; 13(21): 6035-6044.
  1. 25.   Differential effects of proteasome inhibition by bortezomib on murine acute graft-versus-host disease (GVHD): delayed administration of bortezomib results in increased GVHD-dependent gastrointestinal toxicity
  2. Sun, K.; Wilkins, D. E. C.; Anver, M. R.; Sayers, T. J.; Panoskaltsis-Mortari, A.; Blazar, B. R.; Weiniak, L. A.; Murphy, W. J.
  3. Blood. 2005, NOV 1; 106(9): 3293-3299.
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