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  1. 1.   Duplicate entries in the Protein Data Bank: how to detect and handle them
  2. Wlodawer,Alexander; Dauter, Zbigniew; Rubach, Pawel; Minor, Wladek; Jaskolski, Mariusz; Jiang, Ziqiu; Jeffcott, William; Anosova, Olga; Kurlin, Vitaliy
  3. Acta Crystallographica. Section D, Structural Biology. 2025, Apr 01;
  1. 2.   RAS internal tandem duplication disrupts GTPase-activating protein (GAP) binding to activate oncogenic signaling
  2. Nelson, Andrew C; Turbyville,Tommy; Dharmaiah,Sathiya; Rigby,Megan; Yang, Rendong; Wang, Ting-You; Columbus,John; Stephens, Robert; Taylor,Troy; Sciacca, Drew; Onsongo, Getiria; Sarver, Anne; Subramanian, Subbaya; Nissley,Dwight; Simanshu,Dhirendra; Lou, Emil
  3. The Journal of biological chemistry. 2020, JUL 10; 295(28): 9335-9348.
  1. 3.   With Age Comes Maturity: Biochemical and Structural Transformation of a Human Centriole in the Making
  2. Sullenberger,Catherine; Vasquez Limeta,Alejandra; Kong,Dong; Loncarek,Jadranka
  3. Cells. 2020, JUN; 9(6):
  1. 4.   Phase separation of Polo-like kinase 4 by autoactivation and clustering drives centriole biogenesis
  2. Park, Jung-Eun; Zhang, Liang; Bang, Jeong Kyu; Andresson,Thorkell; DiMaio, Frank; Lee, Kyung S
  3. Nature communications. 2019, Oct 31; 10(1): 4959.
  1. 5.   Threonine Tyrosine Kinase Inhibition Eliminates Lung Cancers by Augmenting Apoptosis and Polyploidy
  2. Zheng, Lin; Chen, Zibo; Kawakami, Masanori; Chen, Yulong; Roszik, Jason; Mustachio, Lisa Maria; Kurie, Jonathan M; Villalobos, Pamela; Lu, Wei; Behren, Carmen; Mino, Barbara; Solis, Luisa M; Silvester, Jennifer; Thu, Kelsie L; Cescon, David W; Rodriguez-Canales, Jaime; Wistuba, Ignacio I; Mak, Tak W; Liu, Xi; Dmitrovsky,Ethan
  3. Molecular cancer therapeutics. 2019, OCT; 18(10): 1775-1786.
  1. 6.   Polo-like kinase 4 inhibition produces polyploidy and apoptotic death of lung cancers
  2. Kawakami, Masanori; Mustachio, Lisa Maria; Zheng, Lin; Chen, Yulong; Rodriguez-Canales, Jaime; Mino, Barbara; Kurie, Jonathan M; Roszik, Jason; Villalobos, Pamela Andrea; Thu, Kelsie L; Silvester, Jennifer; Cescon, David W; Wistuba, Ignacio I; Mak, Tak W; Liu, Xi; Dmitrovsky, Ethan
  3. Proceedings of the National Academy of Sciences of the United States of America. 2018, Feb 20; 115(8): 1913-1918.
  1. 7.   Centriole triplet microtubules are required for stable centriole formation and inheritance in human cell
  2. Wang, Jennifer T.; Kong, Dong; Hoerner, Christian R.; Loncarek, Jadranka; Stearns, Tim
  3. ELIFE. 2017, SEP 14; 6
  1. 8.   Centriole Remodeling during Spermiogenesis in Drosophila
  2. Khire, Atul; Jo, Kyoung H.; Kong, Dong; Akhshi, Tara; Blachon, Stephanie; Cekic, Anthony R.; Hynek, Sarah; Ha, Andrew; Loncarek, Jadranka; Mennella, Vito; Avidor-Reiss, Tomer
  3. CURRENT BIOLOGY. 2016, Dec 5; 26(23): 3183-3189.
  1. 9.   Identification of Intragenic Deletions and Duplication in the FLCN Gene in Birt-Hogg-Dube Syndrome
  2. Benhammou, J. N. B. J. N.; Vocke, C. D.; Santani, A.; Schmidt, L. S.; Baba, M.; Seyama, K.; Wu, X. L.; Korolevich, S.; Nathanson, K. L.; Stolle, C. A.; Linehan, W. M.
  3. Genes Chromosomes & Cancer. 2011, Jun; 50(6): 466-477.
  1. 10.   Evolution of domain promiscuity in eukaryotic genomes-a perspective from the inferred ancestral domain architectures
  2. Cohen-Gihon, I.; Fong, J. H.; Sharan, R.; Nussinov, R.; Przytycka, T. M.; Panchenko, A. R.
  3. Molecular Biosystems. 2011, Mar 1; 7(3): 784-792.
  1. 11.   Mosaic Uniparental Disomies and Aneuploidies as Large Structural Variants of the Human Genome
  2. Rodriguez-Santiago, B.; Malats, N.; Rothman, N.; Armengol, L.; Garcia-Closas, M.; Kogevinas, M.; Villa, O.; Hutchinson, A.; Earl, J.; Marenne, G.; Jacobs, K.; Rico, D.; Tardon, A.; Carrato, A.; Thomas, G.; Valencia, A.; Silverman, D.; Real, F. X.; Chanock, S. J.; Perez-Jurado, L. A.
  3. American Journal of Human Genetics. 2010, Jul; 87(1): 129-138.
  1. 12.   Polo-box domain: a versatile mediator of polo-like kinase function
  2. Park, J. E.; Soung, N. K.; Johmura, Y.; Kang, Y. H.; Liao, C.; Lee, K. H.; Park, C. H.; Nicklaus, M. C.; Lee, K. S.
  3. Cellular and Molecular Life Sciences. 2010, Jun; 67(12): 1957-1970.
  1. 13.   Mammalian cell-cycle regulation: several Cdks, numerous cyclins and diverse compensatory mechanisms
  2. Satyanarayana, A.; Kaldis, P.
  3. Oncogene. 2009 28(33): 2925-2939.
  1. 14.   Genome and gene alterations by insertions and deletions in the evolution of human and chimpanzee chromosome 22
  2. Volfovsky, N.; Oleksyk, T. K.; Cruz, K. C.; Truelove, A. L.; Stephens, R. M.; Smith, M. W.
  3. Bmc Genomics. 2009 10 AR 51
  1. 15.   Loss of centrosome integrity induces p38-p53-p21dependent G1-S arrest
  2. Mikule, K.; Delaval, B.; Kaldis, P.; Jurcyzk, A.; Hergert, P.; Doxsey, S.
  3. Nature Cell Biology. 2007, Feb; 9(2): 160-U49.
  1. 16.   Mitochondrial introgressions into the nuclear genome of the domestic cat
  2. Antunes, A.; Pontius, J.; Ramos, M. J.; O'Brien, S. J.; Johnson, W. E.
  3. Journal of Heredity. 2007 98(5): 414-420.
  1. 17.   The genome of the sea urchin Strongylocentrotus purpuratus
  2. Sodergren, E.; Weinstock, G. M.; Davidson, E. H.; Cameron, R. A.; Gibbs, R. A.; Weinstock, G. M.; Angerer, R. C.; Angerer, L. M.; Arnone, M. I.; Burgess, D. R.; Burke, R. D.; Cameron, R. A.; Coffman, J. A.; Davidson, E. H.; Dean, M.; Elphick, M. R.; Ettensohn, C. A.; Foltz, K. R.; Hamdoun, A.; Hynes, R. O.; Klein, W. H.; Marzluff, W.; McClay, D. R.; Morris, R. L.; Mushegian, A.; Rast, J. P.; Sodergren, E.; Smith, L. C.; Thorndyke, M. C.; Vacquier, V. D.; Weinstock, G. M.; Wessel, G. M.; Wray, G.; Zhang, L.; Sodergren, E.; Weinstock, G. M.; Angerer, R. C.; Angerer, L. M.; Cameron, R. A.; Davidson, E. H.; Elsik, C. G.; Ermolaeva, O.; Hlavina, W.; Hofmann, G.; Kitts, P.; Landrum, M. J.; Mackey, A. J.; Maglott, D.; Panopoulou, G.; Poustka, A. J.; Pruitt, K.; Sapojnikov, V.; Song, X. Z.; Souvorov, A.; Solovyev, V.; Wei, Z.; Whittaker, C. A.; Worley, K.; Zhang, L.; Sodergren, E.; Weinstock, G. M.; Durbin, K. J.; Gibbs, R. A.; Shen, Y. F.; Song, X. Z.; Worley, K.; Zhang, L.; Wray, G.; Fedrigo, O.; Garfield, D.; Haygood, R.; Primus, A.; Satija, R.; Severson, T.; Zhang, L.; Sodergren, E.; Weinstock, G. M.; Gonzalez-Garay, M. L.; Jackson, A. R.; Milosavljevic, A.; Song, X. Z.; Tong, M.; Worley, K.; Ettensohn, C. A.; Cameron, R. A.; Killian, C. E.; Landrum, M. J.; Livingston, B. T.; Wilt, F. H.; Coffman, J. A.; Marzluff, W.; Mushegian, A.; Adams, N.; Belle, R.; Carbonneau, S.; Cheung, R.; Cormier, P.; Cosson, B.; Croce, J.; Fernandez-Guerra, A.; Geneviere, A. M.; Goel, M.; Kelkar, H.; Morales, J.; Mulner-Lorillon, O.; Robertson, A. J.; Hamdoun, A.; Goldstone, J. V.; Adams, N.; Cole, B.; Dean, M.; Epel, D.; Gold, B.; Hahn, M. E.; Howard-Ashby, M.; Scally, M.; Stegeman, J. J.; Morris, R. L.; Allgood, E. L.; Cool, J.; Judkins, K. M.; McCafferty, S. S.; Musante, A. M.; Obar, R. A.; Rawson, A. P.; Rossetti, B. J.; Burgess, D. R.; Allgood, E. L.; Cool, J.; Gibbons, I. R.; Hoffman, M. P.; Judkins, K. M.; Leone, A.; McCafferty, S. S.; Morris, R. L.; Musante, A. M.; Obar, R. A.; Rawson, A. P.; Rossetti, B. J.; Wessel, G. M.; Davidson, E. H.; Cameron, R. A.; Istrail, S.; Materna, S. C.; Samanta, M. P.; Stolc, V.; Tongprasit, W.; Tu, Q.; Angerer, R. C.; Angerer, L. M.; Wei, Z.; Hynes, R. O.; Bergeron, K. F.; Brandhorst, B. P.; Burke, R. D.; Whittaker, C. A.; Whittle, J.; Cameron, R. A.; Berney, K.; Bottjer, D. J.; Calestani, C.; Davidson, E. H.; Peterson, K.; Chow, E.; Yuan, Q. A.; Elhaik, E.; Elsik, C. G.; Graur, D.; Reese, J. T.; Bosdet, I.; Heesun, S.; Marra, M. A.; Schein, J.; Dean, M.; Hamdoun, A.; Rast, J. P.; Smith, L. C.; Anderson, M. K.; Berney, K.; Brockton, V.; Buckley, K. M.; Cameron, R. A.; Cohen, A. H.; Fugmann, S. D.; Hibino, T.; Loza-Coll, M.; Majeske, A. J.; Messier, C.; Nair, S. V.; Pancer, Z.; Terwilliger, D. P.; Burke, R. D.; Elphick, M. R.; Klein, W. H.; Thorndyke, M. C.; Agca, C.; Angerer, L. M.; Arboleda, E.; Arnone, M. I.; Brandhorst, B. P.; Chen, N. S.; Churcher, A. M.; Hallbook, F.; Humphrey, G. W.; Hynes, R. O.; Idris, M. M.; Kiyama, T.; Liang, S. G.; Mellott, D.; Mu, X. Q.; Murray, G.; Olinski, R. P.; Raible, F.; Rowe, M.; Taylor, J. S.; Tessmar-Raible, K.; Wang, D.; Wilson, K. H.; Yaguchi, S.; Foltz, K. R.; Vacquier, V. D.; Wessel, G. M.; Gaasterland, T.; Galindo, B. E.; Gunaratne, H. J.; Howard-Ashby, M.; Humphrey, G. W.; Juliano, C.; Kinukawa, M.; Moy, G. W.; Neill, A. T.; Nomura, M.; Raisch, M.; Reade, A.; Roux, M. M.; Song, J. L.; Su, Y. H.; Townley, I. K.; Voronina, E.; Wong, J. L.; Arnone, M. I.; Thorndyke, M. C.; Amore, G.; Angerer, L. M.; Arboleda, E.; Branno, M.; Brown, E. R.; Cavalieri, V.; Duboc, V.; Duloquin, L.; Elphick, M. R.; Flytzanis, C.; Gache, C.; Geneviere, A. M.; Idris, M. M.; Lapraz, F.; Lepage, T.; Locascio, A.; Martinez, P.; Matassi, G.; Matranga, V.; McClay, D. R.; Morales, J.; Poustka, A. J.; Raible, F.; Range, R.; Rizzo, F.; Rottinger, E.; Rowe, M.; Tessmar-Raible, K.; Sodergren, E.; Weinstock, G. M.; Wilson, K.; McClay, D. R.; Angerer, L. M.; Arnone, M. I.; Beane, W.; Bradham, C.; Byrum, C.; Croce, J.; Duboc, V.; Duloquin, L.; Gache, C.; Geneviere, A. M.; Glenn, T.; Hibino, T.; Hussain, S.; Lapraz, F.; Lepage, T.; Livingston, B. T.; Loza, M.; Manning, G.; Miranda, E.; Miranda, E.; Range, R.; Rizzo, F.; Rottinger, E.; Thomason, R.; Walton, K.; Wei, Z.; Wessel, G. M.; Wikramanayke, A.; Wilson, K. H.; Whittaker, C.; Wu, S. Y.; Xu, R. H.; Davidson, E. H.; Arnone, M. I.; Branno, M.; Brown, C. T.; Cameron, R. A.; Chen, L. L.; Gray, R. F.; Howard-Ashby, M.; Istrail, S.; Lee, P. Y.; Locascio, A.; Martinez, P.; Materna, S. C.; Nam, J.; Oliveri, P.; Rizzo, F.; Smith, J.; Muzny, D.; Sodergren, E.; Gibbs, R. A.; Weinstock, G. M.; Bell, S.; Chacko, J.; Cree, A.; Curry, S.; Davis, C.; Dinh, H.; Dugan-Rocha, S.; Fowler, J.; Gill, R.; Hamilton, C.; Hernandez, J.; Hines, S.; Hume, J.; Jackson, L.; Jolivet, A.; Kovar, C.; Lee, S.; Lewis, L.; Miner, G.; Morgan, M.; Nazareth, L. V.; Okwuonu, G.; Parker, D.; Pu, L. L.; Shen, Y. F.; Shen, Y. F.; Wright, R.; Sea Urchin Genome Sequencing Consortium
  3. Science. 2006, Nov; 314(5801): 941-952.
  1. 18.   Evolution of the vertebrate ABC gene family: Analysis of gene birth and death
  2. Annilo, T.; Chen, Z. Q.; Shulenin, S.; Costantino, J.; Thomas, L.; Lou, H.; Stefanov, S.; Dean, M.
  3. Genomics. 2006, Jul; 88(1): 1-11.
  1. 19.   Mutations in the U5 sequences adjacent to the primer binding site do not affect tRNA cleavage by Rous sarcoma virus RNase H but do cause aberrant integrations in vivo
  2. Oh, J.; Chang, K. W.; Hughes, S. H.
  3. Journal of Virology. 2006, JAN; 80(1): 451-459.
  1. 20.   A rhesus macaque radiation hybrid map and comparative analysis with the human genome
  2. Murphy, W. J.; Agarwala, R.; Schaffer, A. A.; Stephens, R.; Smith, C.; Crumpler, N. J.; David, V. A.; O'Brien, S. J.
  3. Genomics. 2005, OCT; 86(4): 383-395.
  1. 21.   Activation of the Jun N-terminal kinase pathway by friend spleen focus-forming virus and its role in the growth and survival of friend virus-induced erythroleukemia cells
  2. Nishigaki, K.; Hanson, C.; Thompson, D.; Yugawa, T.; Ruscetti, S.
  3. Journal of Virology. 2005, OCT; 79(20): 12752-12762.
  1. 22.   A mechanism of palindromic gene amplification in Saccharomyces cerevisiae
  2. Rattray, A. J.; Shafer, B. K.; Neelam, B.; Strathern, J. N.
  3. Genes & Development. 2005, JUN 1; 19(11): 1390-1399.
  1. 23.   The B30.2(SPRY) domain of the retroviral restriction factor TRIM5 alpha exhibits line age-specific length and sequence variation in primates
  2. Song, B. W.; Gold, B.; O'HUigin, C.; Javanbakht, H.; Li, X.; Stremlau, M.; Winkler, C.; Dean, M.; Sodroski, J.
  3. Journal of Virology. 2005, MAY; 79(10): 6111-6121.
  1. 24.   Direct sequence comparison of two divergent class I MHC natural killer cell receptor haplotypes
  2. Makrigiannis, A. P.; Patel, D.; Goulet, M. L.; Dewar, K.; Anderson, S. K.
  3. Genes and Immunity. 2005, MAR; 6(2): 71-83.
  1. 25.   Single haplotype analysis demonstrates rapid evolution of the killer immunoglobulin-like receptor (KIR) loci in primates
  2. Sambrook, J. G.; Bashirova, A.; Palmer, S.; Sims, S.; Trowsdale, J.; bi-Rached, L.; Parham, P.; Carrington, M.; Beck, S.
  3. Genome Research. 2005, JAN; 15(1): 25-35.
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