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  1. 1.   Correlation of protein binding pocket properties with hits' chemistries used in generation of ultra-large virtual libraries
  2. Song, Robert X; Nicklaus,Marc; Tarasova,Nadya
  3. Journal of Computer-Aided Molecular Design. 2024, May 16; 38(1): 22.
  1. 2.   Revisiting and corrections to the annotated SRSF3 (SRp20) gene structure and RefSeq sequences from the human and mouse genomes
  2. Yu,Lulu; Majerciak,Vladimir; Jia, Rong; Zheng,Zhi-Ming
  3. Cell Insight. 2023, Apr ; 2(2): 100089.
  1. 3.   Structural variant analysis of a cancer reference cell line sample using multiple sequencing technologies
  2. Talsania,Keyur; Shen,Tsai-Wei; Chen, Xiongfong; Jaeger, Erich; Li, Zhipan; Chen, Zhong; Chen, Wanqiu; Tran,Bao; Kusko, Rebecca; Wang, Limin; Pang, Andy Wing Chun; Yang, Zhaowei; Choudhari, Sulbha; Colgan, Michael; Fang, Li Tai; Carroll, Andrew; Shetty,Jyoti; Kriga,Yuliya; German,Oksana; Smirnova,Tatyana; Liu, Tiantain; Li, Jing; Kellman, Ben; Hong, Karl; Hastie, Alex R; Natarajan, Aparna; Moshrefi, Ali; Granat, Anastasiya; Truong, Tiffany; Bombardi, Robin; Mankinen, Veronnica; Meerzaman, Daoud; Mason, Christopher E; Collins, Jack; Stahlberg, Eric; Xiao, Chunlin; Wang, Charles; Xiao, Wenming; Zhao,Yongmei
  3. Genome Biology. 2022, Dec 13; 23(1): 255.
  1. 4.   Signaling in the crowded cell
  2. Nussinov,Ruth; Tsai,Chung-Jung; Jang,Hyunbum
  3. Current Opinion in Structural Biology. 2021, Dec; 71: 43-50.
  1. 5.   Medin Oligomer Membrane Pore Formation: A Potential Mechanism of Vascular Dysfunction
  2. Younger, Scott; Jang,Hyunbum; Davies, Hannah A; Niemiec, Martin J; Garcia, Joe G N; Nussinov,Ruth; Migrino, Raymond Q; Madine, Jillian; Arce, Fernando T
  3. Biophysical journal. 2020, JUN 2; 118(11): 2769-2782.
  1. 6.   PIK3Cd expression by fibroblasts promotes triple-negative breast cancer progression
  2. Gagliano, Teresa; Shah, Kalpit; Gargani, Sofia; Lao, Liyan; Alsaleem, Mansour; Chen, Jianing; Ntafis, Vasileios; Huang, Penghan; Ditsiou, Angeliki; Vella, Viviana; Yadav, Kritika; Bienkowska, Kamila; Bresciani, Giulia; Kang, Kai; Li, Leping; Carter, Philip; Benstead-Hume, Graeme; O'Hanlon,Tim; Dean,Michael; Pearl, Frances Mg; Lee, Soo Chin; Rakha, Emad A; Green, Andrew R; Kontoyiannis, Dimitris L; Song, Erwei; Stebbing, Justin; Giamas, Georgios
  3. The Journal of clinical investigation. 2020, JUN 1; 130(6): 3188-3204.
  1. 7.   Cryo-EM structure of the bacterial Ton motor subcomplex ExbB-ExbD provides information on structure and stoichiometry
  2. Celia, Herve; Botos, Istvan; Ni, Xiaodan; Fox,Tara; De Val Alda,Natalia; Lloubes, Roland; Jiang, Jiansen; Buchanan, Susan K
  3. Communications biology. 2019, OCT 4; 2(1): 358.
  1. 8.   The Human TET2 Gene Contains Three Distinct Promoter Regions With Differing Tissue and Developmental Specificities
  2. Lou,Hong; Li,Hongchuan; Ho, Kevin J.; Cai, Luke L.; Huang, Andy S.; Shank, Tyler R.; Verneris, Michael R.; Nickerson, Michael L.; Dean, Michael; Anderson,Steve
  3. FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY. 2019, Jun 7; 7
  1. 9.   Is Nanoclustering essential for all oncogenic KRas pathways? Can it explain why wild-type KRas can inhibit its oncogenic variant?
  2. Nussinov,Ruth; Tsai,Chung-Jung; Jang,Hyunbum
  3. Seminars in Cancer Biology. 2019, FEB; 54: 114-120.
  1. 10.   Calmodulin (CaM) Activates PI3K alpha by Targeting the "Soft" CaM-Binding Motifs in Both the nSH2 and cSH2 Domains of p85 alpha
  2. Zhang,Mingzhen; Li, Zhigang; Wang, Guanqiao; Jang,Hyunbum; Sacks, David B.; Zhang, Jian; Gaponenko, Vadim; Nussinov,Ruth
  3. JOURNAL OF PHYSICAL CHEMISTRY B. 2018, Dec 13; 122(49): 11137-11146.
  1. 11.   Arl2-Mediated Allosteric Release of Farnesylated KRas4B from Shuttling Factor PDE delta
  2. Ozdemir, E. Sila; Jang, Hyunbum; Gursoy, Attila; Keskin, Ozlem; Nussinov, Ruth
  3. JOURNAL OF PHYSICAL CHEMISTRY B. 2018, Aug 2; 122(30): 7503-7513.
  1. 12.   Calmodulin and IQGAP1 activation of PI3K alpha and Akt in KRAS, HRAS and NRAS-driven cancers
  2. Nussinov, Ruth; Zhang, Mingzhen; Tsai, Chung-Jung; Jang, Hyunbum
  3. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE. 2018, Jun; 0925-4439:(6, Part B, Special Issue): 2304-2314.
  1. 13.   Interaction of Calmodulin with the cSH2 Domain of the p85 Regulatory Subunit
  2. Wang, Guanqiao; Zhang, Mingzhen; Jang, Hyunbum; Lu, Shaoyong; Lin, Shizhou; Chen, Guoqiang; Nussinov, Ruth; Zhang, Jian; Gaponenko, Vadim
  3. Biochemistry. 2018, Mar 27; 57(12): 1917-1928.
  1. 14.   Effects of Point Substitutions on the Structure of Toxic Alzheimer's beta-Amyloid Channels: Atomic Force Microscopy and Molecular Dynamics Simulations
  2. Connelly, L.; Jang, H.; Arce, F. T.; Ramachandran, S.; Kagan, B. L.; Nussinov, R.; Lal, R.
  3. Biochemistry. 2012, Apr; 51(14): 3031-3038.
  1. 15.   Antimicrobial Properties of Amyloid Peptides
  2. Kagan, B. L.; Jang, H.; Capone, R.; Arce, F. T.; Ramachandran, S.; Lal, R.; Nussinov, R.
  3. Molecular Pharmaceutics. 2012, Apr; 9(4): 708-717.
  1. 16.   Quantification of irinotecan, SN38, and SN38G in human and porcine plasma by ultra high-performance liquid chromatography-tandem mass spectrometry and its application to hepatic chemoembolization
  2. Chen, X. H.; Peer, C. J.; Alfaro, R.; Tian, T.; Spencer, S. D.; Figg, W. D.
  3. Journal of Pharmaceutical and Biomedical Analysis. 2012, Mar; 62: 140-148.
  1. 17.   Evaluation of Multiplexed Cytokine and Inflammation Marker Measurements: a Methodologic Study
  2. Chaturvedi, A. K.; Kemp, T. J.; Pfeiffer, R. M.; Biancotto, A.; Williams, M.; Munuo, S.; Purdue, M. P.; Hsing, A. W.; Pinto, L.; McCoy, J. P.; Hildesheim, A.
  3. Cancer Epidemiology Biomarkers & Prevention. 2011, Sep; 20(9): 1902-1911.
  1. 18.   Dysregulated Delta Np63 alpha Inhibits Expression of Ink4a/arf, Blocks Senescence, and Promotes Malignant Conversion of Keratinocytes
  2. Ha, L. A.; Ponnamperuma, R. M.; Jay, S.; Ricci, M. S.; Weinberg, W. C.
  3. Plos One. 2011, Jul; 6(7): 13.
  1. 19.   The adult Drosophila gastric and stomach organs are maintained by a multipotent stem cell pool at the foregut/midgut junction in the cardia (proventriculus)
  2. Singh, R.; Zeng, X. K.; Zheng, Z. Y.; Hou, S. X.
  3. Cell Cycle. 2011, Apr; 10(7): 1109-1120.
  1. 20.   Hematologically important mutations: X-linked chronic granulomatous disease (third update)
  2. Roos, D.; Kuhns, D. B.; Maddalena, A.; Roesler, J.; Lopez, J. A.; Ariga, T.; Avcin, T.; de Boer, M.; Bustamante, J.; Condino-Neto, A.; Di Matteo, G.; He, J. X.; Hill, H. R.; Holland, S. M.; Kannengiesser, C.; Koker, M. Y.; Kondratenko, I.; van Leeuwen, K.; Malech, H. L.; Marodi, L.; Nunoi, H.; Stasia, M. J.; Ventura, A. M.; Witwer, C. T.; Wolach, B.; Gallin, J. I.
  3. Blood Cells Molecules and Diseases. 2010, Oct; 45(3): 246-265.
  1. 21.   The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models
  2. Shi, L. M.; Campbell, G.; Jones, W. D.; Campagne, F.; Wen, Z. N.; Walker, S. J.; Su, Z. Q.; Chu, T. M.; Goodsaid, F. M.; Pusztai, L.; Shaughnessy, J. D.; Oberthuer, A.; Thomas, R. S.; Paules, R. S.; Fielden, M.; Barlogie, B.; Chen, W. J.; Du, P.; Fischer, M.; Furlanello, C.; Gallas, B. D.; Ge, X. J.; Megherbi, D. B.; Symmans, W. F.; Wang, M. D.; Zhang, J.; Bitter, H.; Brors, B.; Bushel, P. R.; Bylesjo, M.; Chen, M. J.; Cheng, J.; Chou, J.; Davison, T. S.; Delorenzi, M.; Deng, Y. P.; Devanarayan, V.; Dix, D. J.; Dopazo, J.; Dorff, K. C.; Elloumi, F.; Fan, J. Q.; Fan, S. C.; Fan, X. H.; Fang, H.; Gonzaludo, N.; Hess, K. R.; Hong, H. X.; Huan, J.; Irizarry, R. A.; Judson, R.; Juraeva, D.; Lababidi, S.; Lambert, C. G.; Li, L.; Li, Y. N.; Li, Z.; Lin, S. M.; Liu, G. Z.; Lobenhofer, E. K.; Luo, J.; Luo, W.; McCall, M. N.; Nikolsky, Y.; Pennello, G. A.; Perkins, R. G.; Philip, R.; Popovici, V.; Price, N. D.; Qian, F.; Scherer, A.; Shi, T. L.; Shi, W. W.; Sung, J.; Thierry-Mieg, D.; Thierry-Mieg, J.; Thodima, V.; Trygg, J.; Vishnuvajjala, L.; Wang, S. J.; Wu, J. P.; Wu, Y. C.; Xie, Q. A.; Yousef, W. A.; Zhang, L. A.; Zhang, X. G.; Zhong, S.; Zhou, Y. M.; Zhu, S.; Arasappan, D.; Bao, W. J.; Lucas, A. B.; Berthold, F.; Brennan, R. J.; Buness, A.; Catalano, J. G.; Chang, C.; Chen, R.; Cheng, Y. Y.; Cui, J. A.; Czika, W.; Demichelis, F.; Deng, X. T.; Dosymbekov, D.; Eils, R.; Feng, Y.; Fostel, J.; Fulmer-Smentek, S.; Fuscoe, J. C.; Gatto, L.; Ge, W. G.; Goldstein, D. R.; Guo, L.; Halbert, D. N.; Han, J.; Harris, S. C.; Hatzis, C.; Herman, D.; Huang, J. P.; Jensen, R. V.; Jiang, R.; Johnson, C. D.; Jurman, G.; Kahlert, Y.; Khuder, S. A.; Kohl, M.; Li, J. Y.; Li, M. L.; Li, Q. Z.; Li, S.; Li, Z. G.; Liu, J.; Liu, Y.; Liu, Z. C.; Meng, L.; Madera, M.; Martinez-Murillo, F.; Medina, I.; Meehan, J.; Miclaus, K.; Moffitt, R. A.; Montaner, D.; Mukherjee, P.; Mulligan, G. J.; Neville, P.; Nikolskaya, T.; Ning, B. T.; Page, G. P.; Parker, J.; Parry, R. M.; Peng, X. J.; Peterson, R. L.; Phan, J. H.; Quanz, B.; Ren, Y.; Riccadonna, S.; Roter, A. H.; Samuelson, F. W.; Schumacher, M. M.; Shambaugh, J. D.; Shi, Q. A.; Shippy, R.; Si, S. Z.; Smalter, A.; Sotiriou, C.; Soukup, M.; Staedtler, F.; Steiner, G.; Stokes, T. H.; Sun, Q. L.; Tan, P. Y.; Tang, R.; Tezak, Z.; Thorn, B.; Tsyganova, M.; Turpaz, Y.; Vega, S. C.; Visintainer, R.; von Frese, J.; Wang, C.; Wang, E.; Wang, J. W.; Wang, W.; Westermann, F.; Willey, J. C.; Woods, M.; Wu, S. J.; Xiao, N. Q.; Xu, J.; Xu, L.; Yang, L.; Zeng, X. A.; Zhang, J. L.; Zhang, L.; Zhang, M.; Zhao, C.; Puri, R. K.; Scherf, U.; Tong, W. D.; Wolfinger, R. D.; Consortium, M.
  3. Pharmacogenomics Journal. 2010, Oct; S5-S16.
  1. 22.   In vitro comparison of O4-benzylfolate modulated, BCNU-induced toxicity in human bone marrow using CFU-GM and tumor cell lines
  2. Behrsing, H. P.; Furniss, M. J.; Robillard, K. A.; Tomaszewski, J. E.; Parchment, R. E.
  3. Cancer Chemotherapy and Pharmacology. 2010, May; 65(6): 1083-1091.
  1. 23.   A large human domain antibody library combining heavy and light chain CDR3 diversity
  2. Chen, W. Z.; Zhu, Z. Y.; Feng, Y.; Dimitrov, D. S.
  3. Molecular Immunology. 2010, Jan; 47(4): 912-921.
  1. 24.   Abnormal Placental Development and Early Embryonic Lethality in EpCAM-Null Mice
  2. Nagao, K.; Zhu, J. J.; Heneghan, M. B.; Hanson, J. C.; Morasso, M. I.; Tessarollo, L.; Mackem, S.; Udey, M. C.
  3. Plos One. 2009, Dec; 4(12): 9.
  1. 25.   Quality Assessment of Microarray Data in a Multicenter Study
  2. Archer, K. J.; Mas, V. R.; O'Brien, T. R.; Pfeiffer, R.; Lum, N. L.; Fisher, R. A.
  3. Diagnostic Molecular Pathology. 2009 18(1): 34-43.
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