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  1. 1.   High-Affinity Interactions of the nSH3/cSH3 Domains of Grb2 with the C-Terminal Proline-Rich Domain of SOS1
  2. Liao,Tsung-Jen; Jang,Hyunbum; Nussinov,Ruth; Fushman, David
  3. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY. 2020, Feb 19; 142: 3401-3411.
  1. 2.   Improving (Q)SAR predictions by examining bias in the selection of compounds for experimental testing
  2. Pogodin, P V; Lagunin, A A; Filimonov, D A; Nicklaus,Marc; Poroikov, V V
  3. SAR and QSAR in environmental research. 2019, OCT 3; 30(10): 759-773.
  1. 3.   Emerging Allosteric Mechanism of EGFR Activation in Physiological and Pathological Contexts
  2. Tsai,Chung-Jung; Nussinov,Ruth
  3. Biophysical journal. 2019, Jul 9; 117(1): 5-13.
  1. 4.   Allostery in Its Many Disguises: From Theory to Applications
  2. Wodak, Shoshana J.; Paci, Emanuele; Dokholyan, Nikolay; Berezovsky, Igor N.; Horovitz, Amnon; Li, Jing; Hilser, Vincent J.; Behar, Ivet; Karanicolas, John; Stock, Gerhard; Hamm, Peter; Stote, Roland H.; Eberhardt, Jerome; Chebaro, Yassmine; Dejaegere, Annick; Cecchini, Marco; Changeux, Jean-Pierre; Bolhuis, Peter G.; Vreede, Jocelyne; Faccioli, Pietro; Orioli, Simone; Ravasio, Riccardo; Yen, Le; Brito, Carolina; Wyart, Matthieu; Gkeka, Paraskevi; Rivalta, Ivan; Palermo, Giulia; Mccammon, J. Andrew; Panecka-Hofman, Joanna; Wade, Rebecca C.; Di Pizio, Antonella; Niv, Masha Y.; Nussinov,Ruth; Tsai,Chung-Jung; Jang,Hyunbum; Padhorny, Dzmitry; Kozakov, Dima; Mcleish, Tom
  3. Structure (London, England : 1993). 2019, Apr 2; 27(4): 566-578.
  1. 5.   Chemical and structural studies provide a mechanistic basis for recognition of the MYC G-quadruplex
  2. Calabrese,Dave; Chen,Xiang; Leon, Elena C.; Gaikwad, Snehal M.; Phyo, Zaw; Hewitt, William M.; Alden, Stephanie; Hilimire, Thomas A.; He, Fahu; Michalowski, Aleksandra M.; Simmons, John K.; Saunders, Lindsey B.; Zhang, Shuling; Connors, Daniel; Walters,Kylie; Mock, Beverly A.; Schneekloth,Jay
  3. NATURE COMMUNICATIONS. 2018, Oct 12; 9(1): 4229.
  1. 6.   A dynamic hydrophobic core orchestrates allostery in protein kinases
  2. Kim, Jonggul; Ahuja, Lalima G.; Chao, Frank; Xia, Youlin; McClendon, Christopher L.; Kornev, Alexandr P.; Taylor, Susan S.; Veglia, Gianluigi
  3. SCIENCE ADVANCES. 2017, APR; 3(4):
  1. 7.   Multiple-Targeting and Conformational Selection in the Estrogen Receptor: Computation and Experiment
  2. Yuan, P.; Liang, K. W.; Ma, B. Y.; Zheng, N.; Nussinov, R.; Huang, J.
  3. Chemical Biology & Drug Design. 2011, Jul; 78(1): 137-149.
  1. 8.   Novel Peptides Based on HIV-1 gp120 Sequence with Homology to Chemokines Inhibit HIV Infection in Cell Culture
  2. Chertov, O.; Zhang, N.; Chen, X.; Oppenheim, J. J.; Lubkowski, J.; McGrath, C.; Sowder, R. C.; Crise, B. J.; Malyguine, A.; Kutzler, M. A.; Steele, A. D.; Henderson, E. E.; Rogers, T. J.
  3. Plos One. 2011, Jan 11; 6(1): 10.
  1. 9.   The role of dynamic conformational ensembles in biomolecular recognition
  2. Boehr, D. D.; Nussinov, R.; Wright, P. E.
  3. Nature Chemical Biology. 2009 5(11): 789-796.
  1. 10.   The structure of receptor-associated protein (RAP)
  2. Lee, D.; Walsh, J. D.; Migliorini, M.; Yu, P.; Cai, T.; Schwieters, C. D.; Krueger, S.; Strickl, D. K.; Wang, Y. X.
  3. Protein Science. 2007, Aug; 16(8): 1628-1640.
  1. 11.   Structural dynamics of the cooperative binding of organic molecules in the human cytochrome P450 3A4
  2. Fishelovitch, D.; Hazan, C.; Shaik, S.; Wolfson, H. J.; Nussinov, R.
  3. Journal of the American Chemical Society. 2007, Feb; 129(6): 1602-1611.
  1. 12.   Studies of the biological properties of human beta-defensin 1
  2. Pazgier, M.; Prahl, A.; Hoover, D. M.; Lubkowski, J.
  3. Journal of Biological Chemistry. 2007, Jan; 282(3): 1819-1829.
  1. 13.   Disruption of estrogen receptor DNA-binding domain and related intramolecular communication restores tamoxifen sensitivity in resistant breast cancer
  2. Wang, L. H.; Yang, X. Y.; Zhang, X. H.; An, P.; Kim, H. J.; Huang, J. Q.; Clarke, R.; Osborne, C. K.; Inman, J. K.; Appella, E.; Farrar, W. L.
  3. Cancer Cell. 2006, Dec; 10(6): 487-499.
  1. 14.   Structural basis of interaction between urokinase-type plasminogen activator and its receptor
  2. Barinka, C.; Parry, G.; Callahan, J.; Shaw, D. E.; Kuo, A.; Bdeir, K.; Cines, D. B.; Mazar, A.; Lubkowski, J.
  3. Journal of Molecular Biology. 2006, Oct; 363(2): 482-495.
  1. 15.   Correlated mutations: Advances and limitations. A study on fusion proteins and on the cohesin-dockerin families
  2. Halperin, I.; Wolfson, H.; Nussinov, R.
  3. Proteins-Structure Function and Bioinformatics. 2006, Jun; 63(4): 832-845.
  1. 16.   RAP uses a histidine switch to regulate its interaction with LRP in the ER and Golgi
  2. Lee, D.; Walsh, J. D.; Mikhailenko, I.; Yu, P.; Migliorini, M.; Wu, Y. B.; Krueger, S.; Curtis, J. E.; Harris, B.; Lockett, S.; Blacklow, S. C.; Strickl, D. K.; Wang, Y. X.
  3. Molecular Cell. 2006, MAY 5; 22(3): 423-430.
  1. 17.   Proline oxidase, a proapoptotic gene, is induced by troglitazone - Evidence for both peroxisome proliferator-activated receptor gamma-dependent and -independent mechanisms
  2. Pandhare, J.; Cooper, S. K.; Phang, J. M.
  3. Journal of Biological Chemistry. 2006, JAN 27; 281(4): 2044-2052.
  1. 18.   Variants of CCR5, which are permissive for HIV-1 infection, show distinct functional responses to CCL3, CCL4 and CCL5
  2. Dong, H. F.; Wigmore, K.; Carrington, M. N.; Dean, M.; Turpin, J. A.; Howard, O. M. Z.
  3. Genes and Immunity. 2005, OCT; 6(7): 609-619.
  1. 19.   Ligand-induced partitioning of human CXCR1 chemokine receptors with lipid raft microenvironments facilitates G-protein-dependent signaling
  2. Jiao, X. M.; Zhang, N.; Xu, X. H.; Oppenheim, J. J.; Jin, T.
  3. Molecular and Cellular Biology. 2005, JUL; 25(13): 5752-5762.
  1. 20.   ATP-regulated module (ARM) of the atrial natriuretic factor receptor guanylate cyclase
  2. Duda, T.; Venkataraman, V.; Ravichandran, S.; Sharma, R. K.
  3. Peptides. 2005, JUN; 26(6): 969-984.
  1. 21.   Reduction of the antiapoptotic protein cFLIP enhances the susceptibility of human renal cancer cells to TRAIL apoptosis
  2. Brooks, A. D.; Sayers, T. J.
  3. Cancer Immunology Immunotherapy. 2005, MAY; 54(5): 499-505.
  1. 22.   Identification of functional domains in the formyl peptide receptor-like 1 for agonist-induced cell chemotaxis
  2. Le, Y. Y.; Ye, R. D.; Gong, W. H.; Li, J. X.; Iribarren, P.; Wang, J. M.
  3. Febs Journal. 2005, FEB; 272(3): 769-778.
  1. 23.   The soluble sema domain of the RON receptor inhibits macrophage-stimulating protein-induced receptor activation
  2. Angeloni, D.; Danilkovitch-Miagkova, A.; Miagkov, A.; Leonard, E. J.; Lerman, M. I.
  3. Journal of Biological Chemistry. 2004 279(5): 3726-3732.
  1. 24.   Phenotypic and functional changes of cytokine-activated neutrophils
  2. Galligan, C.; Yoshimura, T.
  3. Neutrophil: An Emerging Regulator of Inflammatory and Immune Response. 2003; 83 : 24-44.
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