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  1. 1.   The mechanism of RNA duplex recognition and unwinding by DEAD-box helicase DDX3X
  2. Song, He; Ji,Xinhua
  3. NATURE COMMUNICATIONS. 2019, Jul 12; 10(1):
  1. 2.   The Functional Cycle of Rnt1p: Five Consecutive Steps of Double-Stranded RNA Processing by a Eukaryotic RNase III
  2. Song, He; Fang, Xianyang; Jin, Lan; Shaw, Gary; Wang, Yun-Xing; Ji, Xinhua
  3. STRUCTURE. 2017, Feb 7; 25(2): 353-363.
  1. 3.   Two ZnF-UBP Domains in Isopeptidase T (USP5)
  2. Avvakumov, G. V.; Walker, J. R.; Xue, S.; Allali-Hassani, A.; Asinas, A.; Nair, U. B.; Fang, X. Y.; Zuo, X. B.; Wane, Y. X.; Wilkinson, K. D.; Dhe-Paganon, S.
  3. Biochemistry. 2012, Feb; 51(6): 1188-1198.
  1. 4.   Determination of Multicomponent Protein Structures in Solution Using Global Orientation and Shape Restraints
  2. Wang, J. B.; Zuo, X. B.; Yu, P.; Byeon, I.; Jung, J. W.; Wang, X. X.; Dyba, M.; Seifert, S.; Schwieters, C. D.; Qin, J.; Gronenborn, A. M.; Wang, Y. X.
  3. Journal of the American Chemical Society. 2009 131(30): 10507-10515.
  1. 5.   Periodicity, planarity, and pixel (3P): A program using the intrinsic residual dipolar coupling periodicity-to-peptide plane correlation and phi/psi angles to derive protein backbone structures
  2. Wang, J.; Walsh, J. D.; Kuszewski, J.; Wang, Y. X.
  3. Journal of Magnetic Resonance. 2007, Nov; 189(1): 90-103.
  1. 6.   The structure of free L11 and functional dynamics of L11 in free, L11-rRNA(58 nt) binary and L11-rRNA(58 nt)-thiostrepton ternary complexes
  2. Lee, D.; Walsh, J. D.; Yu, P.; Markus, M. A.; Choli-Papadopoulou, T.; Schwieters, C. D.; Krueger, S.; Draper, D. E.; Wang, Y. X.
  3. Journal of Molecular Biology. 2007, Apr; 367(4): 1007-1022.
  1. 7.   Detection of C ' C-alpha correlations in proteins using a new time- and sensitivity-optimal experiment
  2. Lee, D.; Vogeli, B.; Pervushin, K.
  3. Journal of Biomolecular Nmr. 2005, APR; 31(4): 273-278.
  1. 8.   High-resolution crystallography and drug design
  2. Cachau, R. E.; Podjarny, A. D.
  3. Journal of Molecular Recognition. 2005, MAY-JUN; 18(3): 196-202.
  1. 9.   Efficient and precise measurement of H-alpha-C-alpha, C-alpha-C ', C-alpha-C-beta and H-N-N residual dipolar couplings from 2D H-N-N correlation spectra
  2. McFeeters, R.; Fowler, C.; Gaponenko, V.; Byrd, R.
  3. Journal of Biomolecular Nmr. 2005, JAN; 31(1): 35-47.
  1. 10.   Fluorinated 2-(4-amino-3-methylphenyl) benzothiazoles induce CYP1A1 expression, become metabolized, and bind to macromolecules in sensitive human cancer cells
  2. Brantley, E.; Trapani, V.; Alley, M. C.; Hose, C. D.; Bradshaw, T. D.; Stevens, M. F. G.; Sausville, E. A.; Stinson, S. F.
  3. Drug Metabolism and Disposition. 2004, DEC; 32(12): 1392-1401.
  1. 11.   Improving the accuracy of NMR structures of large proteins using pseudocontact shifts as long-range restraints
  2. Gaponenko, V.; Sarma, S. P.; Altieri, A. S.; Horita, D. A.; Li, J.; Byrd, R. A.
  3. Journal of Biomolecular Nmr. 2004 28(3): 205-212.
  1. 12.   The depletion of protein signals in metabonomics analysis with the WET-CPMG pulse sequence
  2. Van, Q. N.; Chmurny, G. N.; Veenstra, T. D.
  3. Biochemical and Biophysical Research Communications. 2003 301(4): 952-959.
  1. 13.   A comparison between elastic network interpolation and MD simulation of 16S ribosomal RNA
  2. Kim, M. K.; Li, W.; Shapiro, B. A.; Chirikjian, G. S.
  3. Journal of Biomolecular Structure & Dynamics. 2003 21(3): 395-405.
  1. 14.   Breaking symmetry in the structure determination of (large) symmetric protein dimers
  2. Gaponenko, V.; Altieri, A. S.; Li, J.; Byrd, R. A.
  3. Journal of Biomolecular Nmr. 2002 24(2): 143-148.
  1. 15.   Dynamics of the Hck-SH3 domain: Comparison of experiment with multiple molecular dynamics simulations
  2. Horita, D. A.; Zhang, W. X.; Smithgall, T. E.; Gmeiner, W. H.; Byrd, R. A.
  3. Protein Science. 2000 9(1): 95-103.
  1. 16.   Crystal structure of ERA: A GTPase-dependent cell cycle regulator containing an RNA binding motif
  2. Chen, X.; Court, D. L.; Ji, X. H.
  3. Proceedings of the National Academy of Sciences of the United States of America. 1999 96(15): 8396-8401.
  1. 17.   Crystal structure of the thermostable archaeal intron-encoded endonuclease I-DmoI
  2. Silva, G. H.; Dalgaard, J. Z.; Belfort, M.; Van Roey, P.
  3. Journal of Molecular Biology. 1999 286(4): 1123-1136.
  1. 18.   Efficient computational algorithms for docking and for generating and matching a library of functional epitopes - II. Computer vision-based techniques for the generation and utilization of functional epitopes
  2. Nussinov, R.; Wolfson, H. J.
  3. Combinatorial Chemistry & High Throughput Screening. 1999 2(5): 261-269.
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