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  1. 1.   The dimeric form of bacterial L-asparaginase YpAI is fully active
  2. Strzelczyk,Pawel; Zhang,Di; Alexandratos,Jerry; Piszczek, Grzegorz; Wlodawer,Alexander; Lubkowski,Jacek
  3. The FEBS Journal. 2022, Sep 24;
  1. 2.   Assaying Homodimers of NF-?B in Live Single Cells
  2. Martin, Erik W; Chakraborty, Sayantan; Presman, Diego M; Tomassoni Ardori,Francesco; Oh, Kyu-Seon; Kaileh, Mary; Tessarollo,Lino; Sung, Myong-Hee
  3. Frontiers in immunology. 2019, Nov 7; 10: 2609.
  1. 3.   Organization of Farnesylated, Carboxymethylated KRAS4B on Membranes
  2. Barklis, Eric; Stephen,Andy; Staubus, August O; Barklis, Robin Lid; Alfadhli, Ayna
  3. Journal of molecular biology. 2019, SEP 6; 431(19): 3706-3717.
  1. 4.   Symmetry-Based Self-assembled Nanotubes Constructed Using Native Protein Structures: The Key Role of Flexible Linkers
  2. Buch, I.; Tsai, C. J.; Wolfson, H. J.; Nussinov, R.
  3. Protein and Peptide Letters. 2011, Apr; 18(4): 362-372.
  1. 5.   Conformational study of the protegrin-I (PG-I) dimer interaction with lipid bilayers and its effect
  2. Jang, H.; Ma, B. Y.; Nussinov, R.
  3. Bmc Structural Biology. 2007, Apr; 7
  1. 6.   Simulations as analytical tools to understand protein aggregation and predict amyloid conformation
  2. Ma, B. Y.; Nussinov, R.
  3. Current Opinion in Chemical Biology. 2006, Oct; 10(5): 445-452.
  1. 7.   Consensus features in amyloid fibrils: sheet-sheet recognition via a (polar or nonpolar) zipper structure
  2. Zheng, J.; Ma, B. Y.; Nussinov, R.
  3. Physical Biology. 2006, Sep; 3(3): P1-P4.
  1. 8.   Structural stability and dynamics of an amyloid-forming peptide GNNQQNY from the yeast prion sup-35
  2. Zheng, J.; Ma, B. Y.; Tsai, C. J.; Nussinov, R.
  3. Biophysical Journal. 2006, Aug; 91(3): 824-833.
  1. 9.   Atomic-level description of amyloid beta-dimer formation
  2. Gnanakaran, S.; Nussinov, R.; Garcia, A. E.
  3. Journal of the American Chemical Society. 2006, Feb; 128(7): 2158-2159.
  1. 10.   Effect of posttranscriptional regulatory elements on transgene expression and virus production in the context of retrovirus vectors
  2. Hlavaty, J.; Schittmayer, M.; Stracke, A.; Jandl, G.; Knapp, E.; Felber, B. K.; Salmons, B.; Gunzburg, W. H.; Renner, M.
  3. Virology. 2005, OCT 10; 341(1): 1-11.
  1. 11.   Crystal structure of the Yersinia type III secretion protein YscE
  2. Phan, J.; Austin, B. P.; Waugh, D. S.
  3. Protein Science. 2005, OCT; 14(10): 2759-2763.
  1. 12.   Energy landscape of amyloidogenic peptide oligomerization by parallel-tempering molecular dynamics simulation: Significant role of Asn ladder
  2. Tsai, H. H.; Reches, M.; Tsai, C. J.; Gunasekaran, K.; Gazit, E.; Nussinov, R.
  3. Proceedings of the National Academy of Sciences of the United States of America. 2005, JUN 7; 102(23): 8174-8179.
  1. 13.   Crystal structure of a SeqA-N filament: implications for DNA replication and chromosome organization
  2. Guarne, A.; Brendler, T.; Zhao, Q. H.; Ghirlando, R.; Austin, S.; Yang, W.
  3. Embo Journal. 2005, APR 20; 24(8): 1502-1511.
  1. 14.   Comparison of the protein-protein interfaces in the p53-DNA crystal structures: Towards elucidation of the biological interface
  2. Ma, B. Y.; Pan, Y. P.; Gunasekaran, K.; Venkataraghavan, R. B.; Levine, A. J.; Nussinov, R.
  3. Proceedings of the National Academy of Sciences of the United States of America. 2005, MAR 15; 102(11): 3988-3993.
  1. 15.   On the role of Cro in lambda prophage induction
  2. Svenningsen, S. L.; Costantino, N.; Court, D. L.; Adhya, S.
  3. Proceedings of the National Academy of Sciences of the United States of America. 2005 102(12): 4465-4469.
  1. 16.   Marked structural and functional heterogeneity in CXCR4: Separation of HIV-1 and SDF-I alpha responses
  2. Sloane, A. J.; Raso, V.; Dimitrov, D. S.; Xiao, X. D.; Deo, S.; Muljadi, N.; Restuccia, D.; Turville, S.; Kearney, C.; Broder, C. C.; Zoellner, H.; Cunningham, A. L.; Bendall, L.; Lynch, G. W.
  3. Immunology and Cell Biology. 2005 83(2): 129-143.
  1. 17.   Kinetic stability and crystal structure of the viral capsid protein SHP
  2. Forrer, P.; Chang, C. S.; Ott, D.; Wlodawer, A.; Pluckthun, A.
  3. Journal of Molecular Biology. 2004, NOV 12; 344(1): 179-193.
  1. 18.   Amino-terminal region of the human immunodeficiency virus type 1 nucleocapsid is required for human APOBEC3G packaging
  2. Luo, K.; Liu, B. D.; Xiao, Z. X.; Yu, Y. K.; Yu, X. H.; Gorelick, R.; Yu, X. F.
  3. Journal of Virology. 2004, NOV; 78(21): 11841-11852.
  1. 19.   Oligomerization of the SARS-CoV S glycoprotein: dimerization of the N-terminus and trimerization of the ectodomain
  2. Xiao, X. D.; Feng, Y.; Chakraborti, S.; Dimitrov, D. S.
  3. Biochemical and Biophysical Research Communications. 2004, SEP 10; 322(1): 93-99.
  1. 20.   The catalytic domain of Escherichia coli Lon protease has a unique fold and a Ser-Lys dyad in the active site
  2. Botos, I.; Melnikov, E. E.; Cherry, S.; Tropea, J. E.; Khalatova, A. G.; Rasulova, F.; Dauter, Z.; Maurizi, M. R.; Rotanova, T. V.; Wlodawer, A.; Gustchina, A.
  3. Journal of Biological Chemistry. 2004 279(9): 8140-8148.
  1. 21.   Apo cytochrome c inhibits caspases by preventing apoptosome formation
  2. Martin, A. G.; Nguyen, J.; Wells, J. A.; Fearnhead, H. O.
  3. Biochemical and Biophysical Research Communications. 2004 319(3): 944-950.
  1. 22.   Evidence for CD4-enchanced signaling through the chemokine receptor CCR5
  2. Staudinger, R.; Phogat, S. K.; Xiao, X. D.; Wang, X. H.; Dimitrov, D. S.; Zolla-Pazner, S.
  3. Journal of Biological Chemistry. 2003 278(12): 10389-10392.
  1. 23.   In vivo oligomerization and raft localization of Ebola virus protein VP40 during vesicular budding
  2. Panchal, R. G.; Ruthel, G.; Kenny, T. A.; Kallstrom, G. H.; Lane, D.; Badie, S. S.; Li, L. M.; Bavari, S.; Aman, M. J.
  3. Proceedings of the National Academy of Sciences of the United States of America. 2003 100(26): 15936-15941.
  1. 24.   Human alpha-synuclein-harboring familial Parkinson's disease- linked Ala-53 -> Thr mutation causes neurodegenerative disease with alpha-synuclein aggregation in transgenic mice
  2. Lee, M. K.; Stirling, W.; Xu, Y. Q.; Xu, X. Y.; Qui, D.; Mandir, A. S.; Dawson, T. M.; Copeland, N. G.; Jenkins, N. A.; Price, D. L.
  3. Proceedings of the National Academy of Sciences of the United States of America. 2002 99(13): 8968-8973.
  1. 25.   Fluctuations between stabilizing and destabilizing electrostatic contributions of ion pairs in conformers of the c-Myc-Max leucine zipper
  2. Kumar, S.; Nussinov, R.
  3. Proteins-Structure Function and Genetics. 2000 41(4): 485-497.
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