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  1. 1.   Kaposi Sarcoma-Associated Herpesvirus Risk and Disease in Kidney Donors and Transplant Recipients with HIV in the United States
  2. Nambiar, Puja; Liang, Tao; Labo,Maria Nazzarena; Hand, Jonathan; Blumberg, Emily A; Rana, Meenakshi M; Florman, Sander; Haydel, Brandy; Morris, Michele I; Schaenman, Joanna; Rodrigues, Moreno M S; Werbel, William A; Bowring, Mary G; Friedman-Moraco, Rachel J; Stock, Peter; Stosor, Valentina; Mehta, Shikha; Gilbert, Alexander J; Elias, Nahel; Mehta, Sapna A; Small, Catherine B; Haidar, Ghady; Malinis, Maricar; Pereira, Marcus R; Aslam, Saima; Wojciechowski, David; La Hoz, Ricardo; Santos, Carlos A Q; Apewokin, Senu; Castillo-Lugo, Jose A; Ranganna, Karthik; Morsheimer, Megan; Massie, Allan; Segev, Dorry L; Miley,Wendell; Marshall,Vickie; Whitby,Denise; Tobian, Aaron A A; Durand, Christine M
  3. Clinical Infectious Diseases : an official publication of the Infectious Diseases Society of America. 2025, May 05;
  1. 2.   Deletion of a single CTCF motif at the boundary of a chromatin domain with three FGF genes disrupts gene expression and embryonic development
  2. Chakraborty, Shreeta; Wenzlitschke, Nina; Anderson,Matthew; Eraso, Ariel; Baudic, Manon; Thompson, Joyce J; Evans, Alicia A; Shatford-Adams, Lilly M; Chari,Raj; Awasthi,Roackie; Dale, Ryan K; Lewandoski,Mark; Petros, Timothy J; Rocha, Pedro P
  3. Developmental Cell. 2025, Feb 24;
  1. 3.   High-dimensional analysis of NK cells in kidney transplantation uncovers subsets associated with antibody-independent graft dysfunction
  2. Ruan, Dan Fu; Fribourg, Miguel; Yuki,Yuko; Park,Yeon-Hwa; Martin,Pat; Yu, Haocheng; Kelly, Geoffrey C; Lee, Brian H; de Real, Ronaldo M; Lee, Rachel; Geanon, Daniel; Kim-Schulze, Seunghee; Chun, Nicholas; Cravedi, Paolo; Carrington,Mary; Heeger, Peter S; Horowitz, Amir
  3. JCI insight. 2024, Nov 8; 9(21):
  1. 4.   Self-extinguishing relay waves enable homeostatic control of human neutrophil swarming
  2. Strickland, Evelyn; Pan, Deng; Godfrey, Christian; Kim, Julia S; Hopke, Alex; Ji, Wencheng; Degrange,Maureen; Villavicencio, Bryant; Mansour, Michael K; Zerbe, Christa S; Irimia, Daniel; Amir, Ariel; Weiner, Orion D
  3. Developmental Cell. 2024, Oct 7; 59(19): 2659-2671.
  1. 5.   Stability and gene strand bias of lambda prophages and chromosome organization in Escherichia coli
  2. Li, Xintian; Gallardo, Oscar; August, Elias; Dassa, Bareket; Court,Don; Stavans, Joel; Arbel-Goren, Rinat
  3. mBio. 2024, Jun 18; e0207823.
  1. 6.   Generation and characterization of mature hepatocyte organoids for liver metabolic studies
  2. Liu, Yuchen; Zhou, Yaxing; Ahodantin, James; Jin, Yu; Zhu, Juanjuan; Sun,David; Wu,Xiaolin; Su, Lishan; Yang, Yingzi
  3. Journal of Cell Science. 2024, May 15; 137(10):
  1. 7.   Endogenous EWSR1 Exists in Two Visual Modalities That Reflect Its Associations with Nucleic Acids and Concentration at Sites of Active Transcription
  2. Sundara Rajan, Soumya; Ebegboni, Vernon J; Pichling, Patricio; Ludwig, Katelyn R; Jones, Tamara L; Chari,Raj; Tran, Andy; Kruhlak, Michael J; Loncarek,Jadranka; Caplen, Natasha J
  3. Molecular and Cellular Biology. 2024, Mar 20; 44(3): 103-122.
  1. 8.   Spatiotemporal modulation of growth factors directs the generation of multilineage mouse embryonic stem cell-derived mammary organoids
  2. Sahu,Sounak; Sahoo, Sarthak; Sullivan,Teresa; O'Sullivan,Theresa; Turan,Sevilay; Albaugh,Mary; Burkett,Sandra; Tran,Bao; Salomon,David; Kozlov,Serguei; Koehler, Karl R; Jolly, Mohit Kumar; Sharan,Shyam
  3. Developmental Cell. 2024, Jan 22; 59
  1. 9.   HLA-DP on Epithelial Cells enables Tissue Damage by NKp44+ NK Cells in Ulcerative Colitis
  2. Baumdick, Martin E; Niehrs, Annika; Degenhardt, Frauke; Schwerk, Maria; Hinrichs, Ole; Jordan-Paiz, Ana; Padoan, Benedetta; Wegner, Lucy H M; Schloer, Sebastian; Zecher, Britta F; Malsy, Jakob; Joshi, Vinita R; Illig, Christin; Schröder-Schwarz, Jennifer; Möller, Kimberly J; Martin,Pat; Yuki,Yuko; Ozawa, Mikki; Sauter, Jürgen; Schmidt, Alexander H; Perez, Daniel; Giannou, Anastasios D; Carrington, Mary; Davis, Randall S; Schumacher, Udo; Sauter, Guido; Huber, Samuel; Puelles, Victor G; Melling, Nathaniel; Franke, Andre; Altfeld, Marcus; Bunders, Madeleine J
  3. Gastroenterology. 2023, Oct; 165(4): 946-962.e13..
  1. 10.   Living kidney donors with HIV: experience and outcomes from a case series by the HOPE in Action Consortium
  2. Durand, Christine M; Martinez, Nina; Neumann, Karl; Benedict, Reed C; Baker, Arthur W; Wolfe, Cameron R; Stosor, Valentina; Shetty, Aneesha; Dietch, Zachary C; Goudy, Leah; Callegari, Michelle A; Massie, Allan B; Brown, Diane; Cochran, Willa; Muzaale, Abimereki; Fine, Derek; Tobian, Aaron A R; Winkler,Cheryl; Al Ammary, Fawaz; Segev, Dorry L
  3. Lancet Regional Health. Americas. 2023, Aug 24; 24: 100553.
  1. 11.   Ebola Virus Disease Features Hemophagocytic Lymphohistiocytosis/Macrophage Activation Syndrome in the Rhesus Macaque Model
  2. Liu, David X; Pahar, Bapi; Cooper, Timothy K; Perry, Donna L; Xu, Huanbin; Huzella, Louis M; Adams, Ricky D; Hischak, Amanda M W; Hart, Randy J; Bernbaum, Rebecca; Rivera, Deja; Anthony, Scott; St Claire, Marisa; Byrum, Russell; Cooper, Kurt; Reeder, Rebecca; Kurtz, Jonathan; Hadley, Kyra; Wada, Jiro; Crozier,Ian; Worwa, Gabriella; Bennett, Richard S; Warren, Travis; Holbrook, Michael R; Schmaljohn, Connie S; Hensley, Lisa E
  3. The Journal of Infectious Diseases. 2023, Jun 04;
  1. 12.   Cardiac progenitors instruct second heart field fate through Wnts
  2. Miyamoto, Matthew; Kannan, Suraj; Anderson,Matthew; Liu, Xihe; Suh, David; Htet, Myo; Li, Biyi; Kakani, Tejasvi; Murphy, Sean; Tampakakis, Emmanouil; Lewandoski,Mark; Andersen, Peter; Uosaki, Hideki; Kwon, Chulan
  3. Proceedings of the National Academy of Sciences of the United States of America. 2023, Jan 24; 120(4): e2217687120.
  1. 13.   Interleukin-27 Regulates the Function of the Gastrointestinal Epithelial Barrier in a Human Tissue-Derived Organoid Model
  2. Brice, Daniel P; Murray, Graeme I; Wilson, Heather M; Porter, Ross J; Berry, Susan; Durum,Scott; McLean, Mairi H
  3. Biology. 2022, Mar 11; 11(3):
  1. 14.   Signaling in the crowded cell
  2. Nussinov,Ruth; Tsai,Chung-Jung; Jang,Hyunbum
  3. Current Opinion in Structural Biology. 2021, Dec; 71: 43-50.
  1. 15.   Safety levels of systemic IL-12 induced by cDNA expression as a cancer therapeutic
  2. Savid-Frontera, Constanza; Viano, Maria E; Baez, Natalia S; Reynolds, Della; Matellon, Mariana; Young,Howard; Rodriguez-Galan, Maria C
  3. Immunotherapy. 2021, Nov 16;
  1. 16.   Colonic epithelial cathelicidin (LL-37) expression intensity is associated with progression of colorectal cancer and presence of CD8(+) T cell infiltrate
  2. Porter, Ross J.; Murray, Graeme; Alnabulsi, Abdo; Humphries, Matthew P.; James, Jacqueline A.; Salto-Tellez, Manuel; Craig, Stephanie G.; Wang,Jiming; Yoshimura, Teizo; McLean, Mairi H.
  3. Journal of Pathology Clinical Research. 2021, Sep; 7(5): 495-506.
  1. 17.   Controlled Organization of Inorganic Materials Using Biological Molecules for Activating Therapeutic Functionalities
  2. Chandler, Morgan; Minevich, Brian; Roark, Brandon; Viard,Mathias; Johnson, M Brittany; Rizvi, Mehedi H; Deaton, Thomas A; Kozlov, Seraphim; Panigaj, Martin; Tracy, Joseph B; Yingling, Yaroslava G; Gang, Oleg; Afonin, Kirill A
  3. ACS applied materials & interfaces. 2021, Aug 25; 13(33): 39030-39041.
  1. 18.   SAVI, in silico generation of billions of easily synthesizable compounds through expert-system type rules
  2. Patel,Hitesh; Ihlenfeldt, Wolf-Dietrich; Judson, Philip N; Moroz, Yurii S; Pevzner, Yuri; Peach,Megan; Delannee,Victorien; Tarasova,Nadya; Nicklaus,Marc
  3. Scientific data. 2020, NOV 11; 7(1): 384.
  1. 19.   An optimized protocol for retina single-cell RNA sequencing
  2. Fadl, Benjamin R.; Brodie,Seth; Malasky,Michael; Boland,Joseph; Kelly,Michael; Kelley, Matthew W.; Boger, Erich; Fariss, Robert; Swaroop, Anand; Campello, Laura
  3. MOLECULAR VISION. 2020, OCT 10; 26: 705-717.
  1. 20.   Translating Embryogenesis to Generate Organoids: Novel Approaches to Personalized Medicine
  2. Sahu,Sounak; Sharan,Shyam
  3. iScience. 2020, SEP 25; 23(9):
  1. 21.   Pan-retroviral Nucleocapsid-Mediated Phase Separation Regulates Genomic RNA Positioning and Trafficking
  2. Monette, Anne; Niu, Meijuan; Chen, Lois; Rao, Shringar; Gorelick,Robert; Mouland, Andrew John
  3. Cell reports. 2020, Apr 21; 31(3): 107520.
  1. 22.   Oncoviruses Can Drive Cancer by Rewiring Signaling Pathways Through Interface Mimicry
  2. Guven Maiorov,Emine; Tsai,Chung-Jung; Nussinov,Ruth
  3. Frontiers in oncology. 2019, Nov 15; 9: 1236.
  1. 23.   Improved Retinal Organoid Differentiation by Modulating Signaling Pathways Revealed by Comparative Transcriptome Analyses with Development In Vivo
  2. Brooks, Matthew J; Chen, Holly Y; Kelley, Ryan A; Mondal, Anupam K; Nagashima,Kunio; De Val Alda,Natalia; Li, Tiansen; Chaitankar, Vijender; Swaroop, Anand
  3. Stem cell reports. 2019, Nov 12; 13(5): 891-905.
  1. 24.   Phase separation of Polo-like kinase 4 by autoactivation and clustering drives centriole biogenesis
  2. Park, Jung-Eun; Zhang, Liang; Bang, Jeong Kyu; Andresson,Thorkell; DiMaio, Frank; Lee, Kyung S
  3. Nature communications. 2019, Oct 31; 10(1): 4959.
  1. 25.   Clathrin light chain A drives selective myosin VI recruitment to clathrin-coated pits under membrane tension
  2. Biancospino, Matteo; Buel,Gwen; Niño, Carlos A; Maspero, Elena; di Perrotolo, Rossella Scotto; Raimondi, Andrea; Redlingshöfer, Lisa; Weber, Janine; Brodsky, Frances M; Walters,Kylie; Polo, Simona
  3. Nature communications. 2019, Oct 31; 10(1): 4974.
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