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  1. 1.   Detection of the DNA binding of transcription factors in situ at the single-cell resolution in cultured cells by proximity ligation assay
  2. Ram,Babul; Dai,Chengkai
  3. STAR Protocols. 2023, Nov 01; 4(4): 102692.
  1. 2.   Recent Advances in the Development of Non-Invasive Imaging Probes for Cancer Immunotherapy
  2. Kazim,Muhammad; Yoo,Euna
  3. Angewandte Chemie (International ed. in English). 2023, Oct 16; e202310694.
  1. 3.   Doubly Strapped Zwitterionic NIR-I and NIR-II Heptamethine Cyanine Dyes for Bioconjugation and Fluorescence Imaging
  2. Li,Donghao; Gamage, Rananjaya S; Oliver, Allen G; Patel,Nimit; Usama, Syed Muhammad; Kalen,Joseph; Schnermann,Martin; Smith, Bradley D
  3. Angewandte Chemie (International ed. in English). 2023, May 10; e202305062.
  1. 4.   Thermal Shift Assay for Small GTPase Stability Screening: Evaluation and Suitability
  2. Kopra, Kari; Valtonen, Salla; Mahran, Randa; Kapp, Jonas N; Hassan, Nazia; Gillette,Bill; Dennis, Bryce; Li, Lianbo; Westover, Kenneth D; Plückthun, Andreas; Härmä, Harri
  3. International Journal of Molecular Sciences. 2022, Jun 26; 23(13):
  1. 5.   Targetable conformationally restricted cyanines enable photon-count limited applications
  2. Eiring, Patrick; McLaughlin, Ryan; Matikonda,Siddharth; Han, Zhongying; Grabenhorst, Lennart; Helmerich, Dominic A; Meub, Mara; Beliu, Gerti; Luciano,Michael; Bandi, Venu; Zijlstra, Niels; Shi, Zhen-Dan; Tarasov,Sergey; Swenson, Rolf; Tinnefeld, Philip; Glembockyte, Viktorija; Cordes, Thorben; Sauer, Markus; Schnermann,Martin
  3. Angewandte Chemie (International ed. in English). 2021, Oct 04;
  1. 6.   Remodelin Is a Cryptic Assay Interference Chemotype That Does Not Inhibit NAT10-Dependent Cytidine Acetylation
  2. Shrimp,Jonathan; Jing,Yihang; Thalalla Gamage,Supuni; Nelson, Kathryn M.; Han, Joseph; Bryson, Keri M.; Montgomery,David; Thomas, Justin M.; Nance,Kellie; Sharma, Sunny; Fox,Stephen; Andresson,Thorkell; Sinclair,Wilson; Wu, Hong; Allali-Hassani, Abdellah; Senisterra, Guillermo; Vedadi, Masoud; Lafontaine, Denis; Dahlin, Jayme L.; Marmorstein, Ronen; Walters, Michael A.; Meier,Jordan
  3. ACS MEDICINAL CHEMISTRY LETTERS. 2021, Jun 10; 12(6): 887-892.
  1. 7.   Covalent Small Molecule Immunomodulators Targeting the Protease Active Site
  2. Kim,Hong-Rae; Tagirasa,Ravichandra; Yoo,Euna
  3. Journal of medicinal chemistry. 2021, May 13; 64(9): 5291-5322.
  1. 8.   Karyotype Evolution in 10 Pinniped Species: Variability of Heterochromatin versus High Conservatism of Euchromatin as Revealed by Comparative Molecular Cytogenetics
  2. Beklemisheva, Violetta R; Perelman, Polina L; Lemskaya, Natalya A; Proskuryakova, Anastasia A; Serdyukova, Natalya A; Burkanov, Vladimir N; Gorshunov, Maksim B; Ryder, Oliver; Thompson,Mary; Lento, Gina; O'Brien, Stephen J; Graphodatsky, Alexander S
  3. Genes. 2020, Dec 10; 11(12): pii: E1485.
  1. 9.   Mapping Single Walled Carbon Nanotubes in Photosynthetic Algae by Single-Cell Confocal Raman Microscopy
  2. Orlanducci, Silvia; Fulgenzi,Gianluca; Margonelli, Andrea; Rea, Giuseppina; Antal, Taras K; Lambreva, Maya D
  3. Materials (Basel, Switzerland). 2020, NOV; 13(22): pii: E5121.
  1. 10.   Structure-Based Design with Tag-Based Purification and In-Process Biotinylation Enable Streamlined Development of SARS-CoV-2 Spike Molecular Probes
  2. Zhou, Tongqing; Teng, I-Ting; Olia, Adam S; Cerutti, Gabriele; Gorman, Jason; Nazzari, Alexandra; Shi, Wei; Tsybovsky,Yaroslav; Wang, Lingshu; Wang, Shuishu; Zhang, Baoshan; Zhang, Yi; Katsamba, Phinikoula S; Petrova, Yuliya; Banach, Bailey B; Fahad, Ahmed S; Liu, Lihong; Lopez Acevedo, Sheila N; Madan, Bharat; Oliveira de Souza, Matheus; Pan, Xiaoli; Wang, Pengfei; Wolfe, Jacy R; Yin, Michael; Ho, David D; Phung, Emily; DiPiazza, Anthony; Chang, Lauren A; Abiona, Olubukola M; Corbett, Kizzmekia S; DeKosky, Brandon J; Graham, Barney S; Mascola, John R; Misasi, John; Ruckwardt, Tracy; Sullivan, Nancy J; Shapiro, Lawrence; Kwong, Peter D
  3. Cell reports. 2020, Oct 27; 33(4): 108322.
  1. 11.   Core remodeling leads to long wavelength fluoro-coumarins
  2. Matikonda,Siddharth; Ivanic,Joseph; Gomez, Miguel; Hammersley, Gabrielle; Schnermann,Martin
  3. CHEMICAL SCIENCE. 2020, JUL 28; 11(28): 7302-7307.
  1. 12.   Protein Engineering in the Ubiquitin System: Tools for Discovery and Beyond
  2. Zhao, Bo; Tsai,Yien Che; Jin, Bo; Wang, Bufan; Wang, Yiyang; Zhou, Han; Carpenter, Tomaya; Weissman,Allan; Yin, Jun
  3. Pharmacological reviews. 2020, Apr; 72(2): 380-413.
  1. 13.   HIV-1 Integrase-Targeted Short Peptides Derived from a Viral Protein R Sequence
  2. Zhao, Xue Zhi; Métifiot, Mathieu; Kiselev, Evgeny; Kessl, Jacques J; Maddali, Kasthuraiah; Marchand, Christophe; Kvaratskhelia, Mamuka; Pommier, Yves; Burke, Terrence
  3. Molecules . 2018, Aug; 23(8): pii: E1858.
  1. 14.   Two-color in situ hybridization of whole-mount mouse embryos
  2. Biris, K. K.; Yamaguchi, T. P.
  3. Methods in molecular biology (Clifton, N.J.). 2014 1092: 17-30.
  1. 15.   HER2-and EGFR-Specific Affiprobes: Novel Recombinant Optical Probes for Cell Imaging
  2. Lyakhov, I.; Zielinski, R.; Kuban, M.; Kramer-Marek, G.; Fisher, R.; Chertov, O.; Bindu, L.; Capala, J.
  3. Chembiochem. 2010, Feb; 11(3): 345-350.
  1. 16.   Semiconductor Nanocrystals in Autophagy Research: Methodology Improvement at Nanosized Scale
  2. Seleverstov, O.; Phang, J. M.; Zabirnyk, O.
  3. Autophagy in Mammalian Systems. 2009; 452, Pt B : 277-296.
  1. 17.   Quality Assessment of Microarray Data in a Multicenter Study
  2. Archer, K. J.; Mas, V. R.; O'Brien, T. R.; Pfeiffer, R.; Lum, N. L.; Fisher, R. A.
  3. Diagnostic Molecular Pathology. 2009 18(1): 34-43.
  1. 18.   A microarray analysis for differential gene expression in the soybean genome using Bioconductor and R
  2. Alvord, W. G.; Roayaei, J. A.; Quinones, O. A.; Schneider, K. T.
  3. Briefings in Bioinformatics. 2007, Nov; 8(6): 415-431.
  1. 19.   Pathway analysis identifies perturbation of genetic networks induced by butyrate in a bovine kidney epithelial cell line
  2. Li, C. J.; Li, R. W.; Wang, Y. H.; Elsasser, T. H.
  3. Functional & Integrative Genomics. 2007, Jul; 7(3): 193-205.
  1. 20.   Determination of the ex vivo rates of human immunodeficiency virus type 1 reverse transcription by using novel strand-specific amplification analysis
  2. Thomas, D. C.; Voronin, Y. A.; Nikolenko, G. N.; Chen, J. B.; Hu, W. S.; Pathak, V. K.
  3. Journal of Virology. 2007, May; 81(9): 4798-4807.
  1. 21.   Design, synthesis, and evaluation of in vivo potency and selectivity of epoxysuccinyl-based inhibitors of papain-family cysteine proteases
  2. Sadaghiani, A. M.; Verhelst, S. H. L.; Gocheva, V.; Hill, K.; Majerova, E.; Stinson, S.; Joyce, J. A.; Bogyo, M.
  3. Chemistry & Biology. 2007, May; 14(5): 499-511.
  1. 22.   A dendrimer-based nanosized contrast agent, dual-labeled for magnetic resonance and optical fluorescence imaging to localize the sentinel lymph node in mice
  2. Koyama, Y.; Talanov, V. S.; Bernardo, M.; Hama, Y.; Regino, C. A. S.; Brechbiel, M. W.; Choyke, P. L.; Kobayashi, H.
  3. Journal of Magnetic Resonance Imaging. 2007, Apr; 25(4): 866-871.
  1. 23.   Structural assignment of poecillastrins B and C, macrolide lactams from the deep-water Caribbean sponge Poecillastra species
  2. Takada, K.; Choi, B. W.; Rashid, M. A.; Gamble, W. R.; Cardellina, J. H.; Van, Q. N.; Lloyd, J. R.; McMahon, J. B.; Gustafson, K. R.
  3. Journal of Natural Products. 2007, Mar; 70(3): 428-431.
  1. 24.   The livestock photosensitizer, phytoporphyrin (phylloerythrin), is a substrate of the ATP-binding cassette transporter ABCG2
  2. Robey, R. W.; Fetsch, P. A.; Polgar, O.; Dean, M.; Bates, S. E.
  3. Research in Veterinary Science. 2006, Dec; 81(3): 345-349.
  1. 25.   Biotinylated biphenyl ketone-containing 2,4-dioxobutanoic acids designed as HIV-1 integrase photoaffinity ligands
  2. Zhao, X. Z.; Semenova, E. A.; Liao, C. Z.; Nicklaus, M.; Pommier, Y.; Burke, T. R.
  3. Bioorganic & Medicinal Chemistry. 2006, Dec; 14(23): 7816-7825.
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