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  1. 1.   Optimized mammalian expression system for the ubiquitin E3 ligase E6AP/UBE3A
  2. Schafer,Annie; Muli,Christine; Heikal,Rehab; Dyba,Marzena; Tarasov,Sergey; Stratton, Margaret M; Strieter, Eric R; Walters,Kylie
  3. Protein Expression and Purification. 2025, Jan 09; 106661.
  1. 2.   Producing recombinant proteins in Vibrio natriegens
  2. Smith,Matthew; Hernández, José Sánchez; Messing,Simon; Ramakrishnan,Nitya; Higgins,Brianna; Mehalko,Jennifer; Perkins,Shelley; Wall,Vanessa; Grose,Carissa; Frank,Peter; Cregger, Julia; Le,Vi; Johnson,Adam; Sherekar, Mukul; Pagonis,Morgan; Drew,Matt; Hong,Min; Widmeyer, Stephanie R T; Denson,John-Paul; Snead,Kelly; Poon,Ivy; Waybright,Tim; Champagne, Allison; Esposito,Dom; Jones,Jane; Taylor,Troy; Gillette,Bill
  3. Microbial Cell Factories. 2024, Jul 24; 23(1): 208.
  1. 3.   Unexpected tobacco etch virus (TEV) protease cleavage of recombinant human proteins
  2. Beaumont,Lauren; Mehalko,Jennifer; Johnson,Adam; Wall,Vanessa; Esposito,Dom
  3. Protein Expression and Purification. 2024, Apr 26; 220: 106488.
  1. 4.   Pharmacodynamic effects of the PARP inhibitor talazoparib (MDV3800, BMN 673) in patients with BRCA-mutated advanced solid tumors
  2. Mittra, Arjun; Coyne, Geraldine H O' Sullivan; Zlott, Jennifer; Kummar, Shivaani; Meehan, Robert; Rubinstein, Lawrence; Juwara,Lamin; Wilsker,Deborah; Ji,Jay; Miller,Brandon; Navas, Tony; Ferry-Galow,Katherine; Voth,Andrea; Chang,Ting-Chia; Jiwani,Shahanawaz; Parchment,Ralph; Doroshow, James H; Chen, Alice P
  3. Cancer Chemotherapy and Pharmacology. 2023, Nov 27;
  1. 5.   Sequencing-based functional assays for classification of BRCA2 variants in mouse ESCs
  2. Biswas,Kajal; Mitrophanov,Alex; Sahu,Sounak; Sullivan,Teresa; Southon,Eileen; Nousome,Darryl; Reid, Susan; Narula, Sakshi; Smolen, Julia; Sengupta, Trisha; Riedel-Topper, Maximilian; Kapoor, Medha; Babbar, Anav; Stauffer,Stacey; Cleveland, Linda; Tandon, Mayank; Malys,Tyler; Sharan,Shyam
  3. Cell Reports Methods. 2023, Nov 20; 3(11): 100628.
  1. 6.   Repeatability of computed tomography liver radiomic features in a nonhuman primate model of diet-induced steatosis
  2. Wang, Hui; Solomon,Jeffrey; Reza, Syed M S; Yang, Hee-Jeong; Chu, Winston T; Crozier,Ian; Sayre, Philip J; Lee, Byeong Y; Mani, Venkatesh; Friedrich, Thomas C; O'Connor, David H; Worwa, Gabriella; Kuhn, Jens H; Calcagno, Claudia; Castro, Marcelo A
  3. Journal of Medical Imaging (Bellingham, Wash.). 2023, Nov; 10(6): 066004.
  1. 7.   Development of a bicistronic anti-CD19/CD20 CAR construct including abrogation of unexpected nucleic acid sequence deletions
  2. Lam, Norris; Finney, Richard; Yang, Shicheng; Choi, Stephanie; Wu,Xiaolin; Cutmore, Lauren; Andrade, Jorge; Huang, Lei; Amatya, Christina; Cam, Margaret; Kochenderfer, James N
  3. Molecular Therapy Oncolytics. 2023, Sep 21; 30: 132-149.
  1. 8.   Toehold-Mediated Shape Transition of Nucleic Acid Nanoparticles
  2. Hartung, Jordan; McCann, Nathan; Doe, Erwin; Hayth, Hannah; Benkato, Kheiria; Johnson, M Brittany; Viard,Mathias; Afonin, Kirill A; Khisamutdinov, Emil F
  3. ACS Applied Materials & Interfaces. 2023, May 19; 15(21): 25300-25312.
  1. 9.   Mycobacterial Immune Reconstitution Inflammatory Syndrome in HIV is Associated With Protein-Altering Variants in Hemophagocytic Lymphohistiocytosis-Related Genes
  2. Rocco, Joseph M; Laidlaw, Elizabeth; Galindo, Frances; Anderson, Megan; Sortino, Ornella; Kuriakose,Safia; Lisco, Andrea; Manion, Maura; Sereti, Irini
  3. The Journal of Infectious Diseases. 2023, Apr 11;
  1. 10.   Recombineering: Genetic Engineering in Escherichia coli Using Homologous Recombination
  2. Thomason,Lynn; Costantino, Nina; Li, Xintian; Court,Don
  3. Current Protocols. 2023, Feb; 3(2): e656.
  1. 11.   Recombineering in Non-Model Bacteria
  2. Corts, Anna; Thomason,Lynn; Costantino, Nina; Court,Don
  3. Current Protocols. 2022, Dec; 2(12): e605.
  1. 12.   Distinct frequency patterns of LILRB3 and LILRA6 allelic variants in Europeans
  2. Bashirova,Arman; Kasprzak,Wojciech; Ohuigin,Colm; Carrington,Mary
  3. Immunogenetics. 2022, Nov 30;
  1. 13.   Structural basis for cell type specific DNA binding of C/EBPß: the case of cell cycle inhibitor p15INK4b promoter
  2. Lountos, George T; Cherry, Scott; Tropea, Joseph E; Wlodawer, Alexander; Miller, Maria
  3. Journal of Structural Biology. 2022, Nov 04; 214(4): 107918.
  1. 14.   Artificial Immune Cell, AI-cell, a New Tool to Predict Interferon Production by Peripheral Blood Monocytes in Response to Nucleic Acid Nanoparticles
  2. Chandler, Morgan; Jain, Sankalp; Halman, Justin; Hong, Enping; Dobrovolskaia,Marina; Zakharov, Alexey V; Afonin, Kirill A
  3. Small (Weinheim an der Bergstrasse, Germany). 2022, Oct 10; e2204941.
  1. 15.   Severe mycobacterial IRIS in advanced HIV has features of hemophagocytic lymphohistiocytosis and requires prolonged immune suppression
  2. Rocco, Joseph M; Laidlaw, Elizabeth; Galindo, Frances; Anderson, Megan; Rupert,Adam; Higgins,Jeanette; Sortino, Ornella; Ortega-Villa, Ana M; Sheikh, Virginia; Roby, Gregg; Kuriakose, Safia; Lisco, Andrea; Manion, Maura; Sereti, Irini
  3. Clinical Infectious Diseases : an official publication of the Infectious Diseases Society of America. 2022, Sep 01;
  1. 16.   Adaptation of HIV-1/HIV-2 Chimeras with Defects in Genome Packaging and Viral Replication
  2. Rawson, Jonathan M O; Nikolaitchik,Olga; Yoo, Jennifer A; Somoulay, Xayathed; Brown, Matthew A; Mbuntcha Bogni, Franck S; Pathak,Vinay; Soheilian,Ferri; Slack, Ryan L; Sarafianos, Stefan G; Hu,Wei-Shau
  3. mBio. 2022, Aug 29; e0222022.
  1. 17.   The All of Us Research Program: Data quality, utility, and diversity
  2. Ramirez, Andrea H; Sulieman, Lina; Schlueter, David J; Halvorson, Alese; Qian, Jun; Ratsimbazafy, Francis; Loperena, Roxana; Mayo, Kelsey; Basford, Melissa; Deflaux, Nicole; Muthuraman, Karthik N; Natarajan, Karthik; Kho, Abel; Xu, Hua; Wilkins, Consuelo; Anton-Culver, Hoda; Boerwinkle, Eric; Cicek, Mine; Clark, Cheryl R; Cohn, Elizabeth; Ohno-Machado, Lucila; Schully, Sheri D; Ahmedani, Brian K; Argos, Maria; Cronin, Robert M; O'Donnell, Christopher; Fouad, Mona; Goldstein, David B; Greenland, Philip; Hebbring, Scott J; Karlson, Elizabeth W; Khatri, Parinda; Korf, Bruce; Smoller, Jordan W; Sodeke, Stephen; Wilbanks, John; Hentges, Justin; Mockrin,Stephen; Lunt, Christopher; Devaney, Stephanie A; Gebo, Kelly; Denny, Joshua C; Carroll, Robert J; Glazer, David; Harris, Paul A; Hripcsak, George; Philippakis, Anthony; Roden, Dan M
  3. Patterns (New York, N.Y.). 2022, Aug 12; 3(8): 100570.
  1. 18.   Kaposi's sarcoma-associated herpesvirus T cell responses in HIV seronegative individuals from rural Uganda
  2. Nalwoga, Angela; Roshan, Romin; Moore, Kyle; Marshall, Vickie; Miley, Wendell; Labo, Nazzarena; Nakibuule, Marjorie; Cose, Stephen; Rochford, Rosemary; Newton, Robert; Whitby,Denise
  3. Nature Communications. 2021, Dec 16; 12(1):
  1. 19.   WRN helicase safeguards deprotected replication forks in BRCA2-mutated cancer cells
  2. Datta, Arindam; Biswas, Kajal; Sommers, Joshua A.; Thompson, Haley; Awate, Sanket; Nicolae, Claudia M.; Thakar, Tanay; Moldovan, George-Lucian; Shoemaker, Robert H.; Sharan, Shyam K.; Brosh, Robert M.
  3. Nature Communications. 2021, Nov 12; 12(1):
  1. 20.   S-acylation of SARS-CoV-2 Spike Protein: Mechanistic Dissection, In Vitro Reconstitution and Role in Viral Infectivity
  2. Puthenveetil, Robbins; Lun, Cheng Man; Murphy, R Elliot; Healy, Liam B; Vilmen,Geraldine; Christenson, Eric T; Freed,Eric; Banerjee, Anirban
  3. The Journal of biological chemistry. 2021, Oct; 297(4): 101112.
  1. 21.   High prevalence of gastrointestinal manifestations among Cytomegalovirus end-organ disease in the combination antiretroviral era
  2. Caplan, Margaret R.; Wilson, Eleanor M. P.; Schechter, Melissa; Cai, Catherine W.; Venner, Allison; Bishop, Rachel; Adelsberger, Joseph; Higgins, Jeanette; Roby, Gregg; Wang, Jing; Sheikh, Virginia; Sereti, Irini
  3. Journal of Virus Eradication. 2021, Sep 9; 7(3):
  1. 22.   Profiling SARS-CoV-2 HLA-I peptidome reveals T cell epitopes from out-of-frame ORFs
  2. Weingarten-Gabbay, Shira; Klaeger, Susan; Sarkizova, Siranush; Pearlman, Leah R.; Chen, Da-Yuan; Gallagher, Kathleen M. E.; Bauer, Matthew R.; Taylor, Hannah B.; Dunn, W. Augustine; Tarr, Christina; Sidney, John; Rachimi, Suzanna; Conway, Hasahn L.; Katsis, Katelin; Wang, Yuntong; Leistritz-Edwards, Del; Durkin, Melissa R.; Tomkins-Tinch, Christopher H.; Finkel, Yaara; Nachshon, Aharon; Gentili, Matteo; Rivera, Keith D.; Carulli, Isabel P.; Chea, Vipheaviny A.; Chandrashekar, Abishek; Bozkus, Cansu Cimen; Carrington,Mary; Bhardwaj, Nina; Barouch, Dan H.; Sette, Alessandro; Maus, Marcela; Rice, Charles M.; Clauser, Karl R.; Keskin, Derin B.; Pregibon, Daniel C.; Hacohen, Nir; Carr, Steven A.; Abelin, Jennifer G.; Saeed, Mohsan; Sabeti, Pardis C.
  3. CELL. 2021, Jul 22; 184(15): 3962-3980.e17.
  1. 23.   The Recognition of and Reactions to Nucleic Acid Nanoparticles by Human Immune Cells
  2. Bila, Dominika; Radwan, Yasmine; Dobrovolskaia,Marina; Panigaj, Martin; Afonin, Kirill A.
  3. MOLECULES. 2021, Jul 12; 26(14):
  1. 24.   The dystonia gene THAP1 controls DNA double-strand break repair choice
  2. Shinoda, Kenta; Zong, Dali; Callen, Elsa; Wu, Wei; Dumitrache, Lavinia C.; Belinky, Frida; Chari,Raj; Wong, Nancy; Ishikawa, Momoko; Stanlie, Andre; Multhaupt-Buell, Trisha; Sharma, Nutan; Ozelius, Laurie; Ehrlich, Michelle; McKinnon, Peter J.; Nussenzweig, Andre
  3. MOLECULAR CELL. 2021, Jun 17; 81(12): 2611-2624.e10.
  1. 25.   Plasma Metabolomics Reveals Dysregulated Metabolic Signatures in HIV-Associated Immune Reconstitution Inflammatory Syndrome
  2. Pei, Luxin; Fukutani, Kiyoshi F.; Tiburcio, Rafael; Rupert,Adam; Dahlstrom, Eric W.; Galindo, Frances; Laidlaw, Elizabeth; Lisco, Andrea; Manion, Maura; Andrade, Bruno B.; Sereti, Irini
  3. FRONTIERS IN IMMUNOLOGY. 2021, JUN 15; 12
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