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  1. 1.   How to recover from a bad start: adaptation of HIV-1 transcription start site mutants during serial passaging in culture
  2. Nikolaitchik,Olga; Chameettachal,Akhil; Islam,Mohammad Saiful; Keele,Brandon; Delviks-Frankenberry, Krista; Pathak,Vinay; Hu,Wei-Shau; Cheng,Zetao
  3. Journal of Virology. 2025, May 07; e0015925.
  1. 2.   Scaffolding viral protein NC nucleates phase separation of the HIV-1 biomolecular condensate
  2. Monette, Anne; Niu, Meijuan; Nijhoff Asser, Maya; Gorelick,Robert; Mouland, Andrew J
  3. Cell Reports. 2022, Aug 23; 40(8): 111251.
  1. 3.   Relative domain orientation of the L289K HIV-1 reverse transcriptase monomer
  2. Xi, Zhaoyong; Ilina, Tatiana V; Guerrero, Michel; Fan,Lixin; Sluis-Cremer, Nicolas; Wang,Yun-Xing; Ishima, Rieko
  3. Protein Science : a publication of the Protein Society. 2022, May; 31(5): e4307.
  1. 4.   Crystal Structure of a Retroviral Polyprotein: Prototype Foamy Virus Protease-Reverse Transcriptase (PR-RT)
  2. Harrison, Jerry Joe E K; Tuske, Steve; Das, Kalyan; Ruiz, Francesc X; Bauman, Joseph D; Boyer,Paul; DeStefano, Jeffrey J; Hughes,Stephen; Arnold, Eddy
  3. Viruses. 2021, Aug; 13(8):
  1. 5.   In-utero exposure to zidovudine-containing antiretroviral therapy and clonal hematopoiesis in HIV-exposed uninfected newborns
  2. Lin, Shu-Hong; Wang, Youjin; Hartley, Stephen W.; Karyadi, Danielle M.; Lee, Olivia W.; Zhu, Bin; Zhou,Weiyin; Brown, Derek W.; Beilstein-Wedel, Erin; Hazra, Rohan; Kacanek, Deborah; Chadwick, Ellen G.; Marsit, Carmen J.; Poirier, Miriam C.; Brummel, Sean S.; Chanock, Stephen J.; Engels, Eric A.; Machiela, Mitchell J.
  3. AIDS. 2021, Aug 1; 35(10): 1525-1535.
  1. 6.   Reverse-transcribed SARS-CoV-2 RNA can integrate into the genome of cultured human cells and can be expressed in patient-derived tissues
  2. Zhang, Liguo; Richards, Alexsia; Barrasa, M Inmaculada; Hughes,Stephen; Young, Richard A; Jaenisch, Rudolf
  3. Proceedings of the National Academy of Sciences of the United States of America. 2021, May 25; 118(21):
  1. 7.   Nuclear Import of the HIV-1 Core Precedes Reverse Transcription and Uncoating
  2. Selyutina, Anastasia; Persaud, Mirjana; Lee,Kyeongeun; KewalRamani,Vineet; Diaz-Griffero, Felipe
  3. Cell reports. 2020, Sep 29; 32(13): 108201.
  1. 8.   Structure-Based Non-Nucleoside Inhibitor Design: Developing Inhibitors that Are Effective Against Resistant Mutants
  2. Smith,Steven; Pauly,Gary; Hewlett, Katharine; Schneider,Joel; Hughes,Stephen
  3. Chemical biology & drug design. 2020, SEP 17;
  1. 9.   (Q)SAR Models of HIV-1 Protein Inhibition by Drug-Like Compounds
  2. Stolbov, Leonid A; Druzhilovskiy, Dmitry S; Filimonov, Dmitry A; Nicklaus,Marc; Poroikov, Vladimir V
  3. Molecules (Basel, Switzerland). 2020, Jan 1; 25(1):
  1. 10.   Linked dual-class HIV resistance mutations are associated with treatment failure
  2. Boltz,Valerie; Shao,Wei; Bale,Michael; Halvas, Elias; Luke,Brian; McIntyre, James A.; Schooley, Robert T.; Lockman, Shahin; Currier, Judith S.; Sawe, Fred; Hogg, Evelyn; Hughes, Michael D.; Kearney,Mary; Coffin, John M.; Mellors, John W.
  3. JCI INSIGHT. 2019, OCT 3; 4(19):
  1. 11.   Heterogeneous antiretroviral drug distribution and HIV/SHIV detection in the gut of three species
  2. Thompson, Corbin G; Rosen, Elias P; Prince, Heather M A; White, Nicole; Sykes, Craig; de la Cruz, Gabriela; Mathews, Michelle; Deleage,Claire; Estes,Jake; Charlins, Paige; Mulder, Leila R; Kovarova, Martina; Adamson, Lourdes; Arora, Shifali; Dellon, Evan S; Peery, Anne F; Shaheen, Nicholas J; Gay, Cynthia; Muddiman, David C; Akkina, Ramesh; Victor Garcia, J; Luciw, Paul; Kashuba, Angela D M
  3. Science translational medicine. 2019, Jul 03; 11(499): pii: eaap8758..
  1. 12.   Recombination is required for efficient HIV-1 replication and the maintenance of viral genome integrity
  2. Rawson,Jonathan; Nikolaitchik,Olga; Keele,Brandon; Pathak,Vinay; Hu,Wei-Shau
  3. NUCLEIC ACIDS RESEARCH. 2018, Nov 16; 46(20): 10535-10545.
  1. 13.   Cholecystokinin Receptor-Targeted Polyplex Nanoparticle Inhibits Growth and Metastasis of Pancreatic Cancer
  2. Burks, Julian; Nadella, Sandeep; Mahmud, Abdullah; Mankongpaisarnrung, Charoen; Wang, Juan; Hahm, Jong-In; Tucker, Robin D; Shivapurkar, Narayan; Stern, Steve; Smith, Jill P
  3. Cellular and Molecular Gastroenterology and Hepatology. 2018, Mar 07; 6(1): 17-32.
  1. 14.   Potent Inhibition of HIV-1 Replication in Resting CD4 T Cells by Resveratrol and Pterostilbene
  2. Chan, Chi Ngai; Trinite, Benjamin; Levy, David N.
  3. Antimicrobial Agents and Chemotherapy. 2017, Aug 24; 61(9): e00408-17.
  1. 15.   Reverse Transcription in the Saccharomyces cerevisiae Long-Terminal Repeat Retrotransposon Ty3
  2. Rausch, Jason; Miller, Jennifer; Legrice, Stuart
  3. VIRUSES-BASEL. 2017, Mar; 9(3):
  1. 16.   Mechanistic differences between HIV-1 and SIV nucleocapsid proteins and cross-species HIV-1 genomic RNA recognition.
  2. Post, Klara; Olson, Erik D; Naufer, M Nabuan; Gorelick, Robert J; Rouzina, Ioulia; Williams, Mark C; Musier-Forsyth, Karin; Levin, Judith G
  3. Retrovirology. 2016, Dec 29; 13(1): 89.
  1. 17.   Development of Small Molecules with a Noncanonical Binding Mode to HIV-1 Trans Activation Response (TAR) RNA
  2. Abulwerdi, Fardokht; Shortridge, Matthew D.; Sztuba-Solinska, Joanna; Wilson, Robert; Legrice, Stuart; Varani, Gabriele; Schneekloth, Jay
  3. JOURNAL OF MEDICINAL CHEMISTRY. 2016, Dec 22; 59(24): 11148-11160.
  1. 18.   Functional Interplay Between Murine Leukemia Virus Glycogag, Serinc5, and Surface Glycoprotein Governs Virus Entry, with Opposite Effects on Gammaretroviral and Ebolavirus Glycoproteins
  2. Ahi, Yadvinder; Zhang, Shu; Thappeta, Yashna; Denman, Audrey; Feizpour, Amin; Gummuluru, Suryaram; Reinhard, Bjoern; Muriaux, Delphine; Fivash, Matt; Rein, Alan
  3. MBIO. 2016, Nov 22; 7(6): e01985.
  1. 19.   A Triazinone Derivative Inhibits HIV-1 Replication by Interfering with Reverse Transcriptase Activity
  2. Urano, E.; Miyauchi, K.; Kojima, Y.; Hamatake, M.; Ablan, S. D.; Fudo, S.; Freed, E. O.; Hoshino, T.; Komano, J.
  3. Chemmedchem. 2016, 19-Oct; 11(20): 2320-2326.
  1. 20.   HIV-1 Capsid-Targeting Domain of Cleavage and Polyadenylation Specificity Factor 6
  2. Lee, K.; Mulky, A.; Yuen, W.; Martin, T. D.; Meyerson, N. R.; Choi, L.; Yu, H.; Sawyer, S. L.; KewalRamani, V. N.
  3. Journal of Virology. 2012, Apr; 86(7): 3851-3860.
  1. 21.   Quantitation of Multiple Sphingolipid Classes Using Normal and Reversed-Phase LC-ESI-MS/MS: Comparative Profiling of Two Cell Lines
  2. Masood, M. A.; Rao, R. P.; Acharya, J. K.; Blonder, J.; Veenstra, T. D.
  3. Lipids. 2012, Feb; 47(2): 209-226.
  1. 22.   Non-SH2/PDZ reverse signaling by ephrins
  2. Daar, I. O.
  3. Seminars in Cell & Developmental Biology. 2012, Feb; 23(1): 65-74.
  1. 23.   The interdomain linker region of HIV-1 capsid protein is a critical determinant of proper core assembly and stability
  2. Jiang, J. Y.; Ablan, S. D.; Derebail, S.; Hercik, K.; Soheilian, F.; Thomas, J. A.; Tang, S. X.; Hewlett, I.; Nagashima, K.; Gorelick, R. J.; Freed, E. O.; Levin, J. G.
  3. Virology. 2011, Dec; 421(2): 253-265.
  1. 24.   Localization of ASV Integrase-DNA Contacts by Site-Directed Crosslinking and their Structural Analysis
  2. Peletskaya, E.; Andrake, M.; Gustchina, A.; Merkel, G.; Alexandratos, J.; Zhou, D. W.; Bojja, R. S.; Satoh, T.; Potapov, M.; Kogon, A.; Potapov, V.; Wlodawer, A.; Skalka, A. M.
  3. Plos One. 2011, Dec; 6(12):
  1. 25.   Femtomole SHAPE Reveals Regulatory Structures in the Authentic XMRV RNA Genome
  2. Grohman, J. K.; Kottegoda, S.; Gorelick, R. J.; Allbritton, N. L.; Weeks, K. M.
  3. Journal of the American Chemical Society. 2011, Dec; 133(50): 20326-20334.
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