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  1. 1.   Impacts of the SOAT1 genetic variants and protein expression on HBV-related hepatocellular carcinoma
  2. Chen, Yulong; Yang, Xunjun; Chen, Yao; Chen, Guorong; Winkler,Cheryl; An,Ping; Lyu, Jianxin
  3. BMC cancer. 2021, May 26; 21(1):
  1. 2.   Molecular Genomic Features Associated with in Vitro Response of the NCI-60 Cancer Cell Line Panel to Natural Products
  2. Krushkal, Julia; Negi, Simarjeet; Yee, Laura M; Evans,Jason; Grkovic,Tanja; Palmisano, Alida; Fang, Jianwen; Sankaran, Hari; McShane, Lisa M; Zhao, Yingdong; O'Keefe,Barry
  3. Molecular oncology. 2020, NOV 24;
  1. 3.   Host and Viral Genetic Variation in HBV-Related Hepatocellular Carcinoma
  2. An, Ping; Xu, Jinghang; Yu, Yanyan; Winkler, Cheryl
  3. FRONTIERS IN GENETICS. 2018, Jul 19; 9
  1. 4.   Comprehensive and Integrated Genomic Characterization of Adult Soft Tissue Sarcomas
  2. Lazar, Alexander J.; McLellan, Michael D.; Bailey, Matthew H.; Miller, Christopher A.; Appelbaum, Elizabeth L.; Cordes, Matthew G.; Fronick, Catrina C.; Fulton, Lucinda A.; Fulton, Robert S.; Mardis, Elaine R.; Schmidt, Heather K.; Wong, Winghing; Wilson, Richard K.; Yellapantula, Venkata; Radenbaugh, Amie J.; Hoadley, Katherine A.; Hayes, D. Neil; Parker, Joel S.; Wilkerson, Matthew D.; Auman, J. Todd; Balu, Saianand; Bodenheimer, Tom; Hoyle, Alan P.; Jefferys, Stuart R.; Jones, Corbin D.; Lehmann, Kjong-Van; Meng, Shaowu; Mieczkowski, Piotr A.; Mose, Lisle E.; Perou, Charles M.; Roach, Jeffrey; Senbabaoglu, Yasin; Shi, Yan; Simons, Janae V.; Skelly, Tara; Soloway, Matthew G.; Tan, Donghui; Veluvolu, Umadevi; Davis, Ian J.; Hepperla, Austin J.; Brohl, Andrew S.; Kasaian, Katayoon; Mungall, Karen; Sadeghi, Sara; Barthel, Floris P.; Verhaak, Roel; Hu, Xin; Chibon, Frederic; Cherniack, Andrew D.; Shih, Juliann; Beroukhim, Rameen; Meyerson, Matthew; Cibulskis, Carrie; Gabriel, Stacey B.; Saksena, Gordon; Schumacher, Steven E.; Bailey, Matthew H.; Gao, Qingsong; Wong, Winghing; Wyczalkowski, Matthew; Bowlby, Reanne; Robertson, A. Gordon; Ally, Adrian; Balasundaram, Miruna; Brooks, Denise; Carlsen, Rebecca; Chuah, Eric; Dhalla, Noreen; Holt, Robert A.; Jones, Steven J. M.; Lee, Darlene; Li, Irene; Ma, Yussanne; Marra, Marco A.; Mayo, Michael; Moore, Richard A.; Mungall, Andrew J.; Parker, Joel S.; Schein, Jacqueline E.; Sipahimalani, Payal; Tam, Angela; Thiessen, Nina; Wong, Tina; Danilova, Ludmila; Cope, Leslie; Baylin, Stephen B.; Bootwalla, Moiz S.; Lai, Phillip H.; Laird, Peter W.; Maglinte, Dennis T.; Van Den Berg, David J.; Weisenberger, Daniel J.; Wrangle, John; Drill, Esther; Shen, Ronglai; Iype, Lisa; Reynolds, Sheila M.; Shmulevich, Ilya; Yau, Christina; Armenia, Joshua; Liu, Eric Minwei; Benz, Christopher; Pastore, Alessandro; Sanchez-Vega, Francisco; Schultz, Nikolaus; Akbani, Rehan; Hegde, Apurva M.; Liu, Wenbin; Lu, Yiling; Mills, Gordon B.; Weinstein, John N.; Roszik, Jason; Anur, Pavana; Spellman, Paul; Abeshouse, Adam; Chen, Hsiao-Wei; Gao, Jianjiong; Heins, Zachary; Kundra, Ritika; Larsson, Erik; Ochoa, Angelica; Sanchez-Vega, Francisco; Sander, Chris; Schultz, Nikolaus; Socci, Nicholas; Zhang, Hongxin; Noble, Michael S.; Heiman, David I.; Kim, Jaegil; Chin, Lynda; Getz, Gad; Cho, Juok; Defreitas, Timothy; Frazer, Scott; Gehlenborg, Nils; Lawrence, Michael S.; Lin, Pei; Meier, Sam; Voet, Doug; Zhang, Hailei; Byers, Lauren; Diao, Lixia; Gay, Carl M.; Wang, Jing; Newton, Yulia; Cooper, Lee A. D.; Gutman, David A.; Lazar, Alexander J.; Lee, Sanghoon; Nalisnik, Michael; Bowen, Jay; Gastier-Foster, Julie M.; Gerken, Mark; Helsel, Carmen; Hobensack, Shital; Leraas, Kristen M.; Lichtenberg, Tara M.; Ramirez, Nilsa C.; Wise, Lisa; Zmuda, Erik; Anderson, Matthew L.; Castro, Patricia; Ittmann, Michael; Gordienko, Elena; Paklina, Oxana; Setdikova, Galiya; Raut, Chandrajit P.; Karlan, Beth Y.; Lester, Jenny; Belyaev, Dmitry; Fulidou, Victoria; Potapova, Olga; Voronina, Olga; Demetri, George D.; Ramalingam, Suresh S.; Behera, Madhusmita; Delman, Keith; Owonikoko, Taofeek K.; Sica, Gabriel L.; Boyd, Jeff; Magliocco, Anthony; Salner, Andrew; Bennett, Joesph; Iacocca, Mary; Swanson, Patricia; Dottino, Peter; Kalir, Tamara; Pereira, Elena; Akeredolu, Teniola; Crain, Daniel; Curley, Erin; Gardner, Johanna; Mallery, David; Morris, Scott; Paulauskis, Joseph; Penny, Robert; Shelton, Candace; Shelton, Troy; Thompson, Eric; Hoon, Dave B.; Parfitt, Jeremy; Birrer, Michael; Karseladze, Apollon; Mariamidze, Armaz; Dao, Fanny; Levine, Douglas A.; Olvera, Narciso; Maki, Robert G.; Bartlett, John; Eschbacher, Jennifer; Dubina, Michael; Mozgovoy, Evgeny; Fedosenko, Konstantin; Manikhas, Georgy; Sekhon, Harman; Ramirez, Nilsa; Lazar, Alexander J.; Ingram, Davis R.; Torres, Keila E.; DiSaia, Phil; Godwin, Andrew K.; Godwin, Eryn M.; Kuo, Hanluen; Madan, Rashna; Reilly, Colleen; Adebamowo, Clement; Adebamowo, Sally N.; Bocklage, Therese; Higgins, Kelly; Martinez, Cathleen; Auman, J. Todd; Boice, Lori; Grilley-Olson, Juneko E.; Huang, Mei; Perou, Amy H.; Thorne, Leigh B.; Rathmell, W. Kimryn; Gutmann, David H.; Singer, Samuel; Chudamani, Sudha; Liu, Jia; Lolla, Laxmi; Naresh, Rashi; Pihl, Todd; Sun, Qiang; Wan, Yunhu; Wu, Ye; Felau, Ina; Zenklusen, Jean C.; Demchok, John A.; Ferguson, Martin L.; Hutter, Carolyn M.; Sofia, Heidi J.; Tarnuzzer, Roy; Wang, Zhining; Yang, Liming; Zhang, Jiashan (Julia); Demicco, Elizabeth G.; Doyle, Leona A.; Hornick, Jason L.; Lazar, Alexander J.; Rubin, Brian P.; de Rijn, Matt van; Demetri, George D.; Baker, Laurence; Grilley-Olson, Juneko E.; Iype, Lisa; Lazar, Alexander J.; Lichtenberg, Tara M.; Raut, Chandrajit P.; Riedel, Richard F.; Demicco, Elizabeth G.; Ding, Li; Ladanyi, Marc; Lazar, Alexander J.; Novak, Janet E.; Sanchez-Vega, Francisco; Singer, Samuel; Van Tine, Brian A.; Byers, Lauren; Cope, Leslie; Cherniack, Andrew D.; Cooper, Lee A. D.; Davis, Ian J.; Davis, Lara E.; Demetri, George D.; Doyle, Leona A.; Drill, Esther; Godwin, Andrew K.; Grilley-Olsen, Juneko E.; Gutmann, David H.; Hayes, D. Neil; Hepperla, Austin J.; Hoadley, Katherine A.; Hoon, Dave B.; Hornick, Jason L.; Iype, Lisa; Kim, Jaegil; Maki, Robert G.; Pollock, Raphael E.; Raut, Chandrajit P.; Riedel, Richard F.; Robertson, A. Gordon; Rubin, Brian P.; Shih, Juliann; Weinstein, John N.; Wong, Winghing; Akbani, Rehan; Anderson, Matthew L.; Anur, Pavana; Bailey, Matthew H.; Benz, Christopher; Bowen, Jay; Bowlby, Reanne; Brohl, Andrew S.; Cherniack, Andrew D.; Cooper, Lee A. D.; Cope, Leslie; Danilova, Ludmila; Davis, Lara E.; Demetri, George D.; Gay, Carl M.; Godwin, Andrew K.; Grilley-Olson, Juneko E.; Gutman, David A.; Hegde, Apurva M.; Jones, Kevin B.; Kasaian, Katayoon; Ladanyi, Marc; Lazar, Alexander J.; Lee, Sanghoon; Leraas, Kristen M.; Lichtenberg, Tara M.; Martignetti, John A.; McLellan, Michael D.; Miller, Christopher A.; Mungall, Karen; Nalisnik, Michael; Noble, Michael S.; Raut, Chandrajit P.; Riedel, Richard F.; Robertson, A. Gordon; Roszik, Jason; Sadeghi, Sara; Sanchez-Vega, Francisco; Shen, Ronglai; Shih, Juliann; Tong, Pan; Torres, Keila E.; Yau, Christina; Zenklusen, Jean C.
  3. Cell. 2017, Nov 02; 171(4): 950-965.
  1. 5.   Interactions between breast cancer susceptibility loci and menopausal hormone therapy in relationship to breast cancer in the Breast and Prostate Cancer Cohort Consortium
  2. Gaudet, M. M.; Barrdahl, M.; Lindstrom, S.; Travis, R. C.; Auer, P. L.; Buring, J. E.; Chanock, S. J.; Eliassen, A. H.; Gapstur, S. M.; Giles, G. G.; Gunter, M.; Haiman, C.; Hunter, D. J.; Joshi, A. D.; Kaaks, R.; Khaw, K. T.; Lee, I. M.; Le March, L.; Milne, R. L.; Peeters, P. H.; Sund, M.; Tamimi, R.; Trichopoulou, A.; Weiderpass, E.; Yang, X. R.; Prentice, R. L.; Feigelson, H. S.; Canzian, F.; Kraft, P.
  3. Breast Cancer Research and Treatment. 2016, Feb; 155(3): 531-40.
  1. 6.   Performance comparison of SNP detection tools with illumina exome sequencing data--an assessment using both family pedigree information and sample-matched SNP array data
  2. Yi, M.; Zhao, Y.; Jia, L.; He, M.; Kebebew, E.; Stephens, R. M.
  3. Nucleic Acids Research. 2014, Jul; 42(12): e101.
  1. 7.   Characterizing the genetic basis of methylome diversity in histologically normal human lung tissue
  2. Shi, J.; Marconett, C. N.; Duan, J.; Hyl, P. L.; Li, P.; Wang, Z.; Wheeler, W.; Zhou, B.; Campan, M.; Lee, D. S.; Huang, J.; Zhou, W.; Triche, T.; Amundadottir, L.; Warner, A.; Hutchinson, A.; Chen, P. H.; Chung, B. S.; Pesatori, A. C.; Consonni, D.; Bertazzi, P. A.; Bergen, A. W.; Freedman, M.; Siegmund, K. D.; Berman, B. P.; Borok, Z.; Chatterjee, N.; Tucker, M. A.; Caporaso, N. E.; Chanock, S. J.; Laird-Offringa, I. A.; Landi, M. T.
  3. Nature Communications. 2014, 27-Feb; 5: 3365.
  1. 8.   Xenobiotic-metabolizing gene variants, pesticide use, and the risk of prostate cancer
  2. Koutros, S.; Andreotti, G.; Berndt, S. I.; Barry, K. H.; Lubin, J. H.; Hoppin, J. A.; Kamel, F.; Sandler, D. P.; Burdette, L. A.; Yuenger, J.; Yeager, M.; Alavanja, M. C. R.; Freeman, L. E. B.
  3. Pharmacogenetics and Genomics. 2011, Oct; 21(10): 615-623.
  1. 9.   Correlating SHAPE signatures with three-dimensional RNA structures
  2. Bindewald, E.; Wendeler, M.; Legiewicz, M.; Bona, M. K.; Wang, Y.; Pritt, M. J.; Le Grice, S. F. J.; Shapiro, B. A.
  3. Rna-a Publication of the Rna Society. 2011, Sep; 17(9): 1688-1696.
  1. 10.   Association of polymorphisms in the LEDGF/p75 gene (PSIP1) with susceptibility to HIV-1 infection and disease progression
  2. Madlala, P.; Gijsbers, R.; Christ, F.; Hombrouck, A.; Werner, L.; Mlisana, K.; An, P.; Karim, S. S. A.; Winkler, C. A.; Debyser, Z.; Ndung'u, T.
  3. Aids. 2011, Sep; 25(14): 1711-1719.
  1. 11.   Genetic Variation in Metabolic Genes, Occupational Solvent Exposure, and Risk of Non-Hodgkin Lymphoma
  2. Barry, K. H.; Zhang, Y. W.; Lan, Q.; Zahm, S. H.; Holford, T. R.; Leaderer, B.; Boyle, P.; Hosgood, H. D.; Chanock, S.; Yeager, M.; Rothman, N.; Zheng, T. Z.
  3. American Journal of Epidemiology. 2011, Feb; 173(4): 404-413.
  1. 12.   The RNA Transport Element of the Murine musD Retrotransposon Requires Long-range Intramolecular Interactions for Function
  2. Legiewicz, M.; Zolotukhin, A. S.; Pilkington, G. R.; Purzycka, K. J.; Mitchell, M.; Uranishi, H.; Bear, J.; Pavlakis, G. N.; Le Grice, S. F. J.; Felber, B. K.
  3. Journal of Biological Chemistry. 2010, Dec; 285(53): 42097-42104.
  1. 13.   Kaposi Sarcoma (KS)-Associated Herpesvirus MicroRNA Sequence Analysis and KS Risk in a European AIDS-KS Case Control Study
  2. Marshall, V.; Martro, E.; Labo, N.; Ray, A.; Wang, D. A.; Mbisa, G.; Bagni, R. K.; Volfovsky, N.; Casabona, J.; Whitby, D.; Grp, E.-S. S.
  3. Journal of Infectious Diseases. 2010, Oct 1; 202(7): 1126-1135.
  1. 14.   Pharmacogenetics of Membrane Transporters: An Update on Current Approaches
  2. Sissung, T. M.; Baum, C. E.; Kirkl, C. T.; Gao, R.; Gardner, E. R.; Figg, W. D.
  3. Molecular Biotechnology. 2010, Feb; 44(2): 152-167.
  1. 15.   Secondary Structure of the Mature Ex Virio Moloney Murine Leukemia Virus Genomic RNA Dimerization Domain
  2. Gherghe, C.; Leonard, C. W.; Gorelick, R. J.; Weeks, K. M.
  3. Journal of Virology. 2010, Jan; 84(2): 898-906.
  1. 16.   Expression of human BRCA1 variants in mouse ES cells allows functional analysis of BRCA1 mutations
  2. Chang, S.; Biswas, K.; Martin, B. K.; Stauffer, S.; Sharan, S. K.
  3. Journal of Clinical Investigation. 2009, Oct; 119(10): 3160-71.
  1. 17.   Architecture and secondary structure of an entire HIV-1 RNA genome
  2. Watts, J. M.; Dang, K. K.; Gorelick, R. J.; Leonard, C. W.; Bess, J. W.; Swanstrom, R.; Burch, C. L.; Weeks, K. M.
  3. Nature. 2009 460(7256): 711-U87.
  1. 18.   Variants in Interferon-Alpha Pathway Genes and Response to Pegylated Interferon-Alpha2a Plus Ribavirin for Treatment of Chronic Hepatitis C Virus Infection in the Hepatitis C Antiviral Long-Term Treatment Against Cirrhosis Trial
  2. Welzel, T. M.; Morgan, T. R.; Bonkovsky, H. L.; Naishadham, D.; Pfeiffer, R. M.; Wright, E. C.; Hutchinson, A. A.; Crenshaw, A. T.; Bashirova, A.; Carrington, M.; Dotrang, M.; Sterling, R. K.; Lindsay, K. L.; Fontana, R. J.; Lee, W. M.
  3. Hepatology. 2009 49(6): 1847-1858.
  1. 19.   Evaluation of IL10, IL19 and IL20 gene polymorphisms and chronic hepatitis B infection outcome
  2. Truelove, A. L.; Oleksyk, T. K.; Shrestha, S.; Thio, C. L.; Goedert, J. J.; Donfield, S. M.; Kirk, G. D.; Thomas, D. L.; O'Brien, S. J.; Smith, M. W.
  3. International Journal of Immunogenetics. 2008 35(3): 255-264.
  1. 20.   Successful genome-wide scan in paired blood and buccal samples
  2. Feigelson, H. S.; Rodriguez, C.; Welch, R.; Hutchinson, A.; Shao, W.; Jacobs, K.; Diver, W. R.; Calle, E. F.; Thun, M. J.; Hunter, D. J.; Thomas, G.; Chanock, S. J.
  3. Cancer Epidemiology Biomarkers & Prevention. 2007, May; 16(5): 1023-1025.
  1. 21.   The LRC haplotype project: a resource for killer immunoglobulin-like receptor-linked association studies
  2. Horton, R.; Coggill, P.; Miretti, M. M.; Sambrook, J. G.; Traherne, J. A.; Ward, R.; Sims, S.; Palmer, S.; Sehra, H.; Harrow, J.; Rogers, J.; Carrington, M.; Trowsdale, J.; Beck, S.
  3. Tissue Antigens. 2006, Nov; 68(5): 450-452.
  1. 22.   Effects of human TRIM5 alpha polymorphisms on antiretroviral function and susceptibility to human immunodeficiency virus infection
  2. Javanbakht, H.; An, P.; Gold, B.; Petersen, D. C.; O'Huigin, C.; Nelson, G. W.; O'Brien, S. J.; Kirk, G. D.; Detels, R.; Buchbinder, S.; Donfield, S.; Shulenin, S.; Song, B.; Perron, M. J.; Stremlau, M.; Sodroski, J.; Dean, M.; Winkler, C.
  3. Virology. 2006, Oct; 354(1): 15-27.
  1. 23.   Association of enzyme and transporter genotypes with the pharmacokinetics of imatinib
  2. Gardner, E. R.; Burger, H.; van Schaik, R. H.; van Oosterom, A. T.; de Bruijn, E. A.; Guetens, G.; Prenen, H.; de Jong, F. A.; Baker, S. D.; Bates, S. E.; Figg, W. D.; Verweij, J.; Sparreboom, A.; Nooter, K.
  3. Clinical Pharmacology & Therapeutics. 2006, Aug; 80(2): 192-201.
  1. 24.   Exploring SNP-SNP interactions and colon cancer risk using polymorphism interaction analysis
  2. Goodman, J. E.; Mechanic, L. E.; Luke, B. T.; Ambs, S.; Chanock, S.; Harris, C. C.
  3. International Journal of Cancer. 2006, Apr; 118(7): 1790-1797.
  1. 25.   Genetic variation in TNF and IL10 and risk of non-Hodgkin lymphoma: a report from the InterLymph Consortium
  2. Rothman, N.; Skibola, C. F.; Wang, S. S.; Morgan, G.; Lon, Q.; Smith, M. T.; Spinelli, J. J.; Willett, E.; De Sanjose, S.; Cocco, P.; Berndt, S. I.; Brennan, P.; Brooks-Wilson, A.; Wacholder, S.; Becker, N.; Hartge, P.; Zheng, T. Z.; Roman, E.; Holly, E. A.; Boffetta, P.; Armstrong, B.; Cozen, W.; Linet, M.; Bosch, F. X.; Ennas, M. G.; Holford, T. R.; Gallagher, R. P.; Rollinson, S.; Bracci, P. M.; Cerhan, J. R.; Whitby, D.; Moore, P. S.; Leaderer, B.; Lai, A.; Spink, C.; Davis, S.; Bosch, R.; Scarpa, A.; Zhang, Y. W.; Severson, R. K.; Yeager, M.; Chanock, S.; Nieters, A.
  3. Lancet Oncology. 2006, JAN; 7(1): 27-38.
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