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  1. 1.   Is the critical role of loop 3 of Escherichia coli 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase in catalysis due to loop-3 residues arginine-84 and tryptophan-89? Site-directed mutagenesis, biochemical, and crystallographic studies
  2. Li, Y.; Blaszczyk, J.; Wu, Y.; Shi, G. B.; Ji, X. H.; Yan, H. G.
  3. Biochemistry. 2005, JUN 21; 44(24): 8590-8599.
  1. 2.   Determination of the stability constants and oxidation susceptibility of nickel(II) complexes with 2 '-de oxyguano sine 5 '-triphosphate and L-histidine
  2. Kaczmarek, P.; Jezowska-Bojczuk, M.; Bal, W.; Kasprzak, K. S.
  3. Journal of Inorganic Biochemistry. 2005, MAR; 99(3): 737-746.
  1. 3.   Crystal structure of human glutathione S-transferase A3-3 and mechanistic implications for its high steroid isomerase activity
  2. Gu, Y. J.; Guo, J. X.; Pal, A.; Pan, S. S.; Zimniak, P.; Singh, S. V.; Ji, X. H.
  3. Biochemistry. 2004, DEC 21; 43(50): 15673-15679.
  1. 4.   A pivotal role for reductive methylation in the de novo crystallization of a ternary complex composed of Yersinia pestis virulence factors YopN, SycN and YSc
  2. Schubot, F. D.; Waugh, D. S.
  3. Acta Crystallographica Section D-Biological Crystallography. 2004, NOV; 60(Part 11): 1981-1986.
  1. 5.   Coordination mode and oxidation susceptibility of nickel(II) complexes with 2 '-deoxyguanosine 5 '-monophosphate and L-histidine
  2. Jezowska-Bojczuk, M.; Kaczmarek, P.; Bal, W.; Kasprzak, K. S.
  3. Journal of Inorganic Biochemistry. 2004, NOV; 98(11): 1770-1777.
  1. 6.   Essential roles of a dynamic loop in the catalysis of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase
  2. Blaszczyk, J.; Li, Y.; Wu, Y.; Shi, G. B.; Ji, X. H.; Yan, H. G.
  3. Biochemistry. 2004 43(6): 1469-1477.
  1. 7.   Reaction trajectory of pyrophosphoryl transfer catalyzed by 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase
  2. Blaszczyk, J.; Shi, G. B.; Li, Y.; Yan, H. G.; Ji, X. H.
  3. Structure. 2004 12(3): 467-475.
  1. 8.   Conformationally constrained analogues of diacylglycerol. 20. The search for an elusive binding site on protein kinase C through relocation of the carbonyl pharmacophore along the sn-1 side chain of 1,2-diacylglycerol lactones
  2. Tamamura, H.; Sigano, D. M.; Lewin, N. E.; Blumberg, P. M.; Marquez, V. E.
  3. Journal of Medicinal Chemistry. 2004 47(3): 644-655.
  1. 9.   Structures of HIV-1 RT-DNA complexes before and after incorporation of the anti-AIDS drug tenofovir
  2. Tuske, S.; Sarafianos, S. G.; Clark, A. D.; Ding, J. P.; Naeger, L. K.; White, K. L.; Miller, M. D.; Gibbs, C. S.; Boyer, P. L.; Clark, P.; Wang, G.; Gaffney, B. L.; Jones, R. A.; Jerina, D. M.; Hughes, S. H.; Arnold, E.
  3. Nature Structural & Molecular Biology. 2004 11(5): 469-474.
  1. 10.   Caught in the act: visualization of an intermediate in the DNA base-flipping pathway induced by Hhal methyltransferase
  2. Horton, J. R.; Ratner, G.; Banavali, N. K.; Huang, N.; Choi, Y.; Maier, M. A.; Marquez, V. E.; Mackerell, A. D.; Cheng, X. D.
  3. Nucleic Acids Research. 2004 32(13): 3877-3886.
  1. 11.   Engineering of elongation complexes of bacterial and yeast RNA polymerases
  2. Komissarova, N.; Kireeva, M. L.; Becker, J.; Sidorenkov, I.; Kashlev, M.
  3. RNA POLYMERASES AND ASSOCIATED FACTORS, PT D. 2003; 371 : 233-251.
  1. 12.   Transcription termination: Primary intermediates and secondary adducts
  2. Kashlev, M.; Komissarova, N.
  3. Journal of Biological Chemistry. 2002 277(17): 14501-14508.
  1. 13.   Overextended RNA : DNA hybrid as a negative regulator of RNA polymerase II processivity
  2. Kireeva, M. L.; Komissarova, N.; Kashlev, M.
  3. Journal of Molecular Biology. 2000 299(2): 325-335.
  1. 14.   The 8-nucleotide-long RNA : DNA hybrid is a primary stability determinant of the RNA polymerase II elongation complex
  2. Kireeva, M. L.; Komissarova, N.; Waugh, D. S.; Kashlev, M.
  3. Journal of Biological Chemistry. 2000 275(9): 6530-6536.
  1. 15.   Crucial Role of the Rna-Dna Hybrid in the Processivity of Transcription
  2. Sidorenkov, I.; Komissarova, N.; Kashlev, M.
  3. Molecular Cell. 1998 2(1): 55-64.
  1. 16.   Functional topography of nascent RNA in elongation intermediates of RNA polymerase
  2. Komissarova, N.; Kashlev, M.
  3. Proceedings of the National Academy of Sciences of the United States of America. 1998 95(25): 14699-14704.
  1. 17.   Rna Polymerase Switches Between Inactivated and Activated States By Translocating Back and Forth Along the Dna and the Rna
  2. Komissarova, N.; Kashlev, M.
  3. Journal of Biological Chemistry. 1997 272(24): 15329-15338.
  1. 18.   Transcriptional Arrest - Escherichia Coli Rna Polymerase Translocates Backward, Leaving the 3' End of the Rna Intact and Extruded
  2. Komissarova, N.; Kashlev, M.
  3. Proceedings of the National Academy of Sciences of the United States of America. 1997 94(5): 1755-1760.
  1. 19.   Sensitivity of Escherichia Coli (Mutt) and Human (Mth1) 8-Oxo-Dgtpases to in Vitro Inhibition By the Carcinogenic Metals, Nickel(Ii), Copper(Ii), Cobalt(Ii) and Cadmium(Ii)
  2. Porter, D. W.; Yakushiji, H.; Nakabeppu, Y.; Sekiguchi, M.; Fivash, M. J.; Kasprzak, K. S.
  3. Carcinogenesis. 1997 18(9): 1785-1791.
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