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  1. 1.   Topological structure determination of RNA using small angle X-ray scattering
  2. Bhandari, Yuba; Fan, Lixin; Fang, Xianyang; Zaki, George; Stahlberg, Eric; Jiang, Wei; Schwieters, Charles D; Stagno, Jason; Wang, Yun-Xing
  3. Journal of molecular biology. 2017, Nov 24; 429(23): 3635-3649.
  1. 2.   Coarse-graining RNA nanostructures for molecular dynamics simulations
  2. Paliy, M.; Melnik, R.; Shapiro, B. A.
  3. Physical Biology. 2010, Sep; 7(3): 12.
  1. 3.   The structure of free L11 and functional dynamics of L11 in free, L11-rRNA(58 nt) binary and L11-rRNA(58 nt)-thiostrepton ternary complexes
  2. Lee, D.; Walsh, J. D.; Yu, P.; Markus, M. A.; Choli-Papadopoulou, T.; Schwieters, C. D.; Krueger, S.; Draper, D. E.; Wang, Y. X.
  3. Journal of Molecular Biology. 2007, Apr; 367(4): 1007-1022.
  1. 4.   A permissive secondary structure-guided superposition tool for clustering of protein fragments toward protein structure prediction via fragment assembly
  2. Wainreb, G.; Haspel, N.; Wolfson, H. J.; Nussinov, R.
  3. Bioinformatics. 2006, Jun; 22(11): 1343-1352.
  1. 5.   Determining a helical protein structure using peptide pixels
  2. Walsh, J. D.; Kuszweski, J.; Wang, Y. X.
  3. Journal of Magnetic Resonance. 2005, NOV; 177(1): 155-159.
  1. 6.   ARTS: alignment of RNA tertiary structures
  2. Dror, O.; Nussinov, R.; Wolfson, H.
  3. Bioinformatics. 2005, SEP; 21(Suppl. 2): 47-53.
  1. 7.   Mutational analysis of the DEAD-box RNA helicase eIF4AII characterizes its interaction with transformation suppressor Pdcd4 and eIF4GI
  2. Zakowicz, H.; Yang, H. S.; Stark, C.; Wlodawer, A.; Laronde-Leblanc, N.; Colburn, N. H.
  3. Rna-a Publication of the Rna Society. 2005, MAR; 11(3): 261-274.
  1. 8.   Interactions between immunoglobulin-like and catalytic modules in Clostridium thermocellum cellulosomal cellobiohydrolase CbhA
  2. Kataeva, I. A.; Uversky, V. N.; Brewer, J. M.; Schubot, F.; Rose, J. P.; Wang, B. C.; Ljungdahl, L. G.
  3. Protein Engineering Design & Selection. 2004, NOV; 17(11): 759-769.
  1. 9.   Multiple structural alignment by secondary structures: Algorithm and applications
  2. Dror, O.; Benyamini, H.; Nussinov, R.; Wolfson, H. J.
  3. Protein Science. 2003 12(11): 2492-2507.
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