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  1. 1.   Mycobacterial Immune Reconstitution Inflammatory Syndrome in HIV is Associated With Protein-Altering Variants in Hemophagocytic Lymphohistiocytosis-Related Genes
  2. Rocco, Joseph M; Laidlaw, Elizabeth; Galindo, Frances; Anderson, Megan; Sortino, Ornella; Kuriakose,Safia; Lisco, Andrea; Manion, Maura; Sereti, Irini
  3. The Journal of Infectious Diseases. 2023, Apr 11;
  1. 2.   Structure of Helicobacter pylori dihydroneopterin aldolase suggests a fragment-based strategy for isozyme-specific inhibitor design
  2. Shaw,Gary; Fan,Lixin; Cherry,Scott; Shi,Genbin; Tropea, Joseph E; Ji,Xinhua
  3. Current Research in Structural Biology. 2023, Jan 30; 5: 100095.
  1. 3.   Association between severe anaemia and inflammation, risk of IRIS and death in persons with HIV: A multinational cohort study
  2. Araújo-Pereira, Mariana; Sheikh, Virginia; Sereti, Irini; Barreto-Duarte, Beatriz; Arriaga, María B; Tibúrcio, Rafael; Vinhaes, Caian L; Pinto-de-Almeida, Manuella; Wang,Jing; Rupert, Adam; Roby, Gregg; Shaffer, Douglas; Ananworanich, Jintanat; Phanuphak, Nittaya; Sawe, Fred; Andrade, Bruno B
  3. EBioMedicine. 2022, Oct 22; 85: 104309.
  1. 4.   Severe mycobacterial IRIS in advanced HIV has features of hemophagocytic lymphohistiocytosis and requires prolonged immune suppression
  2. Rocco, Joseph M; Laidlaw, Elizabeth; Galindo, Frances; Anderson, Megan; Rupert,Adam; Higgins,Jeanette; Sortino, Ornella; Ortega-Villa, Ana M; Sheikh, Virginia; Roby, Gregg; Kuriakose, Safia; Lisco, Andrea; Manion, Maura; Sereti, Irini
  3. Clinical Infectious Diseases : an official publication of the Infectious Diseases Society of America. 2022, Sep 01;
  1. 5.   Noninferiority testing with censoring when the event rate is low
  2. Gallagher, Shannon K; Wang,Jing; Lumbard, Keith; Dodd, Lori E; Proschan, Michael
  3. Statistics in Medicine. 2022, Aug 22;
  1. 6.   Mycobacterium tuberculosis Induces Irg1 in Murine Macrophages by a Pathway Involving Both TLR-2 and STING/IFNAR Signaling and Requiring Bacterial Phagocytosis
  2. Bomfim, Caio C B; Fisher, Logan; Amaral, Eduardo P; Mittereder, Lara; McCann, Katelyn; Correa, André A S; Namasivayam, Sivaranjani; Swamydas, Muthulekha; Moayeri, Mahtab; Weiss,Jonathan; Chari,Raj; McVicar,Daniel; Costa, Diego L; D'Império Lima, Maria R; Sher, Alan
  3. Frontiers in Cellular and Infection Microbiology. 2022, May 2; 12: 862582.
  1. 7.   Cryo-EM structure and resistance landscape of M. tuberculosis MmpL3: An emergent therapeutic target
  2. Adams, Oliver; Deme,Justin; Parker, Joanne L; Fowler, Philip W; Lea,Susan; Newstead, Simon
  3. Structure (London, England : 1993). 2021, Oct 7; 29(10): 1182-1191.
  1. 8.   Radiological and functional evidence of the bronchial spread of tuberculosis: an observational analysis
  2. Chen, Ray Y.; Yu, Xiang; Smith, Bronwyn; Liu, Xin; Gao, Jingcai; Diacon, Andreas H.; Dawson, Rodney; Tameris, Michele; Zhu, Hong; Qu, Yahong; Zhang, Ruanqing; Pan, Shouguo; Jin, Xiaowei; Goldfeder, Lisa C.; Cai, Ying; Arora, Kriti; Wang, Jing; Vincent, Joel; Malherbe, Stephanus; Thienemann, Friedrich; Wilkinson, Robert J.; Walzl, Gerhard; Barry, Clifton E.
  3. Lancet Microbe. 2021, Oct; 2(10): E518-E526.
  1. 9.   Structure-Activity Relationships of Pyrazolo[1,5-a]pyrimidin-7(4H)-ones as Antitubercular Agents
  2. Oh, Sangmi; Libardo, M. Daben J.; Azeeza, Shaik; Pauly,Gary; Roma, Jose Santinni O.; Sajid, Andaleeb; Tateishi, Yoshitaka; Duncombe, Caroline; Goodwin, Michael; Ioerger, Thomas R.; Wyatt, Paul G.; Ray, Peter C.; Gray, David W.; Boshoff, Helena I. M.; Barry, Clifton E.
  3. ACS Infectious Diseases. 2021, Feb 12; 7(2): 479-492.
  1. 10.   Fourteen-day PET/CT imaging to monitor drug combination activity in treated individuals with tuberculosis
  2. Xie, Yingda L.; de Jager, Veronique R.; Chen, Ray Y.; Dodd, Lori E.; Paripati, Praveen; Via, Laura E.; Follmann, Dean; Wang,Jing; Lumbard, Keith; Lahouar, Saher; Malherbe, Stephanus T.; Andrews, Jenna; Yu, Xiang; Goldfeder, Lisa C.; Cai, Ying; Arora, Kriti; Loxton, Andre G.; Vanker, Naadira; Duvenhage,Michael; Winter, Jill; Song, Taeksun; Walzl, Gerhard; Diacon, Andreas H.; Barry, Clifton E.
  3. Science Translational Medicine. 2021, Feb 3; 13(579):
  1. 11.   Filarial Coinfection Is Associated With Higher Bacterial Burdens and Altered Plasma Cytokine and Chemokine Responses in Tuberculous Lymphadenitis
  2. Kathamuthu, Gokul Raj; Munisankar, Saravanan; Banurekha, Vaithilingam V; Nair, Dina; Sridhar, Rathinam; Babu, Subash
  3. Frontiers in immunology. 2020, Apr 21; 11: 706.
  1. 12.   Heightened systemic levels of anti-inflammatory cytokines in pulmonary tuberculosis and alterations following anti-tuberculosis treatment
  2. Moideen, Kadar; Kumar, Nathella P; Bethunaickan, Ramalingam; Banurekha, Vaithilingam V; Nair, Dina; Babu, Subash
  3. Cytokine. 2020, Mar; 127: 154929.
  1. 13.   Tuberculosis infection and lung adenocarcinoma: Mendelian randomization and pathway analysis of genome-wide association study data from never-smoking Asian women
  2. Wong, Jason Y. Y.; Zhang, Han; Hsiung, Chao A.; Shiraishi, Kouya; Yu, Kai; Matsuo, Keitaro; Wong, Maria Pik; Hong, Yun-Chul; Wang, Jiucun; Seow, Wei Jie; Wang, Zhaoming; Song, Minsun; Kim, Hee Nam; Chang, I-Shou; Chatterjee, Nilanjan; Hu, Wei; Wu, Chen; Mitsudomi, Tetsuya; Zheng, Wei; Kim, Jin Hee; Seow, Adeline; Caporaso, Neil E.; Shin, Min-Ho; Chung, Lap Ping; An, She-Juan; Wang, Ping; Yang, Yang; Zheng, Hong; Yatabe, Yasushi; Zhang, Xu-Chao; Kim, Young Tae; Cai, Qiuyin; Yin, Zhihua; Kim, Young-Chul; Bassig, Bryan A.; Chang, Jiang; Ho, James Chung N.; Ji, Bu-Tian; Daigo, Yataro; Ito, Hidemi; Momozawa, Yukihide; Ashikawa, Kyota; Kamatani, Yoichiro; Honda, Takayuki; Hosgood, H. Dean; Sakamoto, Hiromi; Kunitoh, Hideo; Tsuta, Koji; Watanabe, Shun-Ichi; Kubo, Michiaki; Miyagi, Yohei; Nakayama, Haruhiko; Matsumoto, Shingo; Tsuboi, Masahiro; Goto, Koichi; Shi, Jianxin; Song, Lei; Hua, Xing; Takahashi, Atsushi; Goto, Akiteru; Minamiya, Yoshihiro; Shimizu, Kimihiro; Tanaka, Kazumi; Wei, Fusheng; Matsuda, Fumihiko; Su, Jian; Kim, Yeul Hong; Oh, In-Jae; Song, Fengju; Su, Wu-Chou; Chen, Yu-Min; Chang, Gee-Chen; Chen, Kuan-Yu; Huang, Ming-Shyan; Chien, Li-Hsin; Xiang, Yong-Bing; Park, Jae Yong; Kweon, Sun-Seog; Chen, Chien-Jen; Lee, Kyoung-Mu; Blechter, Batel; Li, Haixin; Gao, Yu-Tang; Qian, Biyun; Lu, Daru; Liu, Jianjun; Jeon, Hyo-Sung; Hsiao, Chin-Fu; Sung, Jae Sook; Tsai, Ying-Huang; Jung, Yoo Jin; Guo, Huan; Hu, Zhibin; Wang, Wen-Chang; Chung,Charles; Burdett,Laurie; Yeager,Meredith; Hutchinson,Amy; Berndt,Sonja; Wu, Wei; Pang, Herbert; Li, Yuqing; Choi, Jin Eun; Park, Kyong Hwa; Sung, Sook Whan; Liu, Li; Kang, C. H.; Zhu, Meng; Chen, Chung-Hsing; Yang, Tsung-Ying; Xu, Jun; Guan, Peng; Tan, Wen; Wang, Chih-Liang; Hsin, Michael; Sit, Ko-Yung; Ho, James; Chen, Ying; Choi, Yi Young; Hung, Jen-Yu; Kim, Jun Suk; Il Yoon, Ho; Lin, Chien-Chung; Park, In Kyu; Xu, Ping; Wang, Yuzhuo; He, Qincheng; Perng, Reury-Perng; Chen, Chih-Yi; Vermeulen, Roel; Wu, Junjie; Lim, Wei-Yen; Chen, Kun-Chieh; Li, Yao-Jen; Li, Jihua; Chen, Hongyan; Yu, Chong-Jen; Jin, Li; Chen, Tzu-Yu; Jiang, Shih-Sheng; Liu, Jie; Yamaji, Taiki; Hicks,Belynda; Wyatt,Kathleen; Li,Shengchao; Dai, Juncheng; Ma, Hongxia; Jin, Guangfu; Song, Bao; Wang, Zhehai; Cheng, Sensen; Li, Xuelian; Ren, Yangwu; Cui, Ping; Iwasaki, Motoki; Shimazu, Taichi; Tsugane, Shoichiro; Zhu, Junjie; Yang, Kaiyun; Jiang, Gening; Fei, Ke; Wu, Guoping; Lin, Hsien-Chin; Chen, Hui-Ling; Fang, Yao-Huei; Tsai, Fang-Yu; Hsieh, Wan-Shan; Yu, Jinming; Stevens, Victoria L.; Laird-Offringa, Ite A.; Marconett, Crystal N.; Rieswijk, Linda; Chao, Ann; Yang, Pan-Chyr; Shu, Xiao-Ou; Wu, Tangchun; Wu, Y. L.; Lin, Dongxin; Chen, Kexin; Zhou, Baosen; Huang, Yun-Chao; Kohno, Takashi; Shen, Hongbing; Chanock, Stephen J.; Rothman, Nathaniel; Lan, Qing
  3. GENOMICS. 2020, MAR; 112: 1223-1232.
  1. 14.   The contribution of KSHV to mortality in hospitalized HIV-infected patients being investigated for tuberculosis in South Africa
  2. Blumenthal, Melissa J; Schutz, Charlotte; Barr, David; Locketz, Michael; Marshall,Vickie; Whitby,Denise; Katz, Arieh A; Uldrick, Thomas; Meintjes, Graeme; Schäfer, Georgia
  3. The Journal of infectious diseases. 2019, SEP 1; 220(5): 841-851.
  1. 15.   Correlation between Disease Severity and the Intestinal Microbiome in Mycobacterium tuberculosis-Infected Rhesus Macaques
  2. Namasivayam, Sivaranjani; Kauffman, Keith D; McCulloch, John A; Yuan, Wuxing; Thovarai, Vishal; Mittereder, Lara R; Trinchieri,Giorgio; Barber, Daniel L; Sher, Alan
  3. mBio. 2019, May-Jun; 10(3): pii: e01018-19..
  1. 16.   Cytokine-Mediated Systemic Adverse Drug Reactions in a Drug-Drug Interaction Study of Dolutegravir with Once-Weekly Isoniazid and Rifapentine
  2. Brooks, Kristina M; George, Jomy M; Pau, Alice K; Rupert, Adam; Mehaffy, Carolina; De, Prithwiraj; Dobos, Karen M; Kellogg, Anela; McLaughlin, Mary; McManus, Maryellen; Alfaro, Raul M; Hadigan, Colleen; Kovacs, Joseph A; Kumar, Parag
  3. Clinical Infectious Diseases. 2018, Jul 15; 67(2): 193-201.
  1. 17.   Longitudinal profiling reveals a persistent intestinal dysbiosis triggered by conventional anti-tuberculosis therapy.
  2. Namasivayam, Sivaranjani; Maiga, Mamoudou; Yuan, Wuxing; Thovarai, Vishal; Costa, Diego L; Mittereder, Lara R; Wipperman, Matthew F; Glickman, Michael S; Dzutsev, Amiran; Trinchieri, Giorgio; Sher, Alan
  3. Microbiome. 2017, Jul 07; 5(1): 71.
  1. 18.   Performance of microscopic observation drug susceptibility for the rapid diagnosis of tuberculosis and detection of drug resistance in Bamako, Mali
  2. Sanogo, M.; Kone, B.; Diarra, B.; Maiga, M.; Baya, B.; Somboro, A. M.; Sarro, Y. S.; Togo, A. C. G.; Dembele, B. P. P.; Goita, D.; Kone, A.; M'Baye, O.; Coulibaly, N.; Diabate, S.; Traore, B.; Diallo, M. H.; Coulibaly, Y. I.; Saleeb, P.; Belson, M.; Orsega, S.; Siddiqui, S.; Polis, M. A.; Dao, S.; Murphy, R. L.; Diallo, S.
  3. CLINICAL MICROBIOLOGY AND INFECTION. 2017, Jun; 23(6):
  1. 19.   Th1 Differentiation Drives the Accumulation of Intravascular, Non-protective CD4 T Cells during Tuberculosis.
  2. Sallin, Michelle A; Sakai, Shunsuke; Kauffman, Keith D; Young, Howard; Zhu, Jinfang; Barber, Daniel L
  3. Cell reports. 2017, Mar 28; 18(13): 3091-3104.
  1. 20.   Formylated MHC Class lb Binding Peptides Activate Both Human and Mouse Neutrophils Primarily through Formyl Peptide Receptor 1
  2. Winther, Malene; Holdfeldt, Andre; Gabl, Michael; Wang, Jiming; Forsman, Huamei; Dahlgren, Claes
  3. PLOS ONE. 2016, Dec 1; 11(12): e0167529.
  1. 21.   Molecular cloning and expression of the IL-10 gene from guinea pigs
  2. Dirisala, V. R.; Jeevan, A.; Bix, G.; Yoshimura, T.; McMurray, D. N.
  3. Gene. 2012, Apr; 498(1): 120-127.
  1. 22.   The Enolization Chemistry of a Thioester-Dependent Racemase: The 1.4 angstrom Crystal Structure of a Reaction Intermediate Complex Characterized by Detailed QM/MM Calculations
  2. Sharma, S.; Bhaumik, P.; Schmitz, W.; Venkatesan, R.; Hiltunen, J. K.; Conzelmann, E.; Juffer, A. H.; Wierenga, R. K.
  3. Journal of Physical Chemistry B. 2012, Mar; 116(11): 3619-3629.
  1. 23.   Suppressed Type 1, Type 2, and Type 17 Cytokine Responses in Active Tuberculosis in Children
  2. Kumar, N. P.; Anuradha, R.; Suresh, R.; Ganesh, R.; Shankar, J.; Kumaraswami, V.; Nutman, T. B.; Babu, S.
  3. Clinical and Vaccine Immunology. 2011, Nov; 18(11): 1856-1864.
  1. 24.   NusA Interaction with the alpha Subunit of E-coil RNA Polymerase Is via the UP Element Site and Releases Autoinhibition
  2. Schweimer, K.; Prasch, S.; Sujatha, P. S.; Bubunenko, M.; Gottesman, M. E.; Rosch, P.
  3. Structure. 2011, Jul; 19(7): 945-954.
  1. 25.   Higher Levels of CRP, D-dimer, IL-6, and Hyaluronic Acid Before Initiation of Antiretroviral Therapy (ART) Are Associated With Increased Risk of AIDS or Death
  2. Boulware, D. R.; Hullsiek, K. H.; Puronen, C. E.; Rupert, A.; Baker, J. V.; French, M. A.; Bohjanen, P. R.; Novak, R. M.; Neaton, J. D.; Sereti, I.; Grp, I. S.
  3. Journal of Infectious Diseases. 2011, Jun; 203(11): 1637-1646.
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