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  1. 1.   Impact of baseline SARS-CoV-2 load in plasma and upper airways on the incidence of acute extrapulmonary complications of COVID-19: a multicentric, prospective, cohort study
  2. Jensen, Tomas O; Harper, Katrina; Gupta, Shaili; Liu, Sean T; Dharan, Nila J; Baker, Jason V; Pett, Sarah L; Shaw-Saliba, Kathryn; Esmail, Aliasgar; Ho, Minh Q; Almasri, Eyad; Dewar,Robin; Lundgren, Jens; Vock, David M
  3. Clinical Infectious Diseases : an official publication of the Infectious Diseases Society of America. 2024, Sep 13;
  1. 2.   A Multiplexed Real-Time PCR Assay for Simultaneous Quantification of Human Immunodeficiency Virus and Hepatitis B Virus for Low-And-Middle- Income Countries
  2. Bocar, Fofana Djeneba; Aminatou, Coulibaly; Mamoudou, Maiga; Nguyen,Thuy; Joel, Gozlan; Zoumana, Diarra; Amadou, Koné; Yacouba, Cissoko; Issiaka, Maiga Almoustapha; Claudia, Hawkins A; Robert, Murphy L; Morand-Joubert, Laurence; Mahamadou, Diakité; Jane, Holl L; Sally, McFall M
  3. Journal of Virological Methods. 2024, Sep 02; 330: 115026.
  1. 3.   The association between single-nucleotide polymorphisms within type 1 interferon pathway genes and human immunodeficiency virus type 1 viral load in antiretroviral-naïve participants
  2. Mørup, Sara Bohnstedt; Leung, Preston; Reilly, Cavan; Sherman,Brad; Chang,Weizhong; Milojevic, Maja; Milinkovic, Ana; Liappis, Angelike; Borgwardt, Line; Petoumenos, Kathy; Paredes, Roger; Mistry, Shweta S; MacPherson, Cameron R; Lundgren, Jens; Helleberg, Marie; Reekie, Joanne; Murray, Daniel D
  3. AIDS Research and Therapy. 2024, May 03; 21(1): 27.
  1. 4.   Clinical and molecular characterization of children and adults with respiratory bocavirus infection in Mexico: a cross-sectional nested study within the ILI002 prospective observational study
  2. Gamiño-Arroyo, Ana Estela; Arellano-Galindo, José; Del Carmen Guerra-de-Blas, Paola; Ortega-Villa, Ana M; Mateja,Allyson; Llamosas-Gallardo, Beatriz; Ortíz-Hernández, Ana A; Valdéz-Vázquez, Rafael; Ramírez-Venegas, Alejandra; Galindo-Fraga, Arturo; Guerrero, Ma Lourdes; Ramos-Cervantes, Pilar; Mendoza-Garcés, Luis; González-Matus, Mónica; Marroquín-Rojas, Carmen; Xicohtencatl-Cortes, Juan; Ochoa, Sara A; Cruz-Córdova, Ariadna; Powers,John; Ruiz-Palacios, Guillermo Miguel; Beigel, John; Moreno-Espinosa, Sarbelio
  3. Lancet Regional Health. Americas. 2024, Jan; 29: 100647.
  1. 5.   Inhibition of neutral sphingomyelinase 2 impairs HIV-1 envelope formation and substantially delays or eliminates viral rebound
  2. Yoo, Seung-Wan; Waheed,Abdul; Deme, Pragney; Tohumeken, Sehmus; Rais, Rana; Smith, Matthew D; DeMarino, Catherine; Calabresi, Peter A; Kashanchi, Fatah; Freed,Eric; Slusher, Barbara S; Haughey, Norman J
  3. Proceedings of the National Academy of Sciences of the United States of America. 2023, Jul 11; 120(28): e2219543120.
  1. 6.   Comparison of Epstein-Barr virus and Kaposi's sarcoma-associated herpesvirus viral load in peripheral blood mononuclear cells and oral fluids of HIV-negative individuals aged 3-89 years from Uganda
  2. Nalwoga, Angela; Marshall,Vickie; Miley,Wendell; Labo,Nazzarena; Whitby,Denise; Newton, Robert; Rochford, Rosemary
  3. Infectious Agents and Cancer. 2023, Jun 14; 18(1): 38.
  1. 7.   Kaposi's sarcoma-associated herpesvirus T cell responses in HIV seronegative individuals from rural Uganda
  2. Nalwoga, Angela; Roshan, Romin; Moore, Kyle; Marshall, Vickie; Miley, Wendell; Labo, Nazzarena; Nakibuule, Marjorie; Cose, Stephen; Rochford, Rosemary; Newton, Robert; Whitby,Denise
  3. Nature Communications. 2021, Dec 16; 12(1):
  1. 8.   Assessing the impact of AGS-004, a dendritic cell-based immunotherapy, and vorinostat on persistent HIV-1 Infection
  2. Gay, Cynthia L; Kuruc, Joann D; Falcinelli, Shane D; Warren, Joanna A; Reifeis, Sarah A; Kirchherr, Jennifer L; James, Katherine S; Dewey, Morgan G; Helms, Alyson; Allard, Brigitte; Stuelke, Erin; Gamble, Alicia; Plachco, Ana; Gorelick,Robert; Eron, Joseph J; Hudgens, Michael; Garrido, Carolina; Goonetilleke, Nilu; DeBenedette, Mark A; Tcherepanova, Irina Y; Nicolette, Charles A; Archin, Nancie M; Margolis, David M
  3. Scientific reports. 2020, Mar 20; 10(1): 5134.
  1. 9.   Single nucleotide polymorphisms in HLA alleles are associated with HIV-1 viral load in demographically diverse, ART-naïve participants from the START trial
  2. Ekenberg, Christina; Tang, Man-Hung Eric; Zucco, Adrian G; Murray, Daniel D; MacPherson, Cameron Ross; Hu,Xiaojun; Sherman,Brad; Losso, Marcelo H; Wood, Robin; Paredes, Roger; Molina, Jean-Michel; Helleberg, Marie; Jina, Nureen; Kityo, Cissy M; Florence, Eric; Polizzotto, Mark N; Neaton, James D; Lane, H Clifford; Lundgren, Jens D
  3. The Journal of infectious diseases. 2019, OCT 15; 220(8): 1325-1334.
  1. 10.   Adaptive viral load monitoring frequency to facilitate differentiated care: a modeling study from Rakai, Uganda
  2. Ssempijja,Victor; Nason, Martha; Nakigozi, Gertrude; Ndyanabo, Anthony; Gray, Ron; Wawer, Maria; Chang, Larry W; Gabriel, Erin; Quinn, Thomas C; Serwadda, David; Reynolds, Steven J
  3. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. 2019, Sep 18; 71(4): 1017-1021.
  1. 11.   Results of Early Virologic Monitoring May Facilitate Differentiated Care Monitoring Strategies for Clients on ART, Rakai, Uganda
  2. Ssempijja,Victor; Chang, Larry W.; Nakigozi, Gertrude; Ndyanabo, Anthony; Quinn, Thomas C.; Cobelens, Frank; Wawer, Maria; Gray, Ronald; Serwadda, David; Reynolds, Steven J.
  3. OPEN FORUM INFECTIOUS DISEASES. 2018, OCT; 5(10): ofy212.
  1. 12.   Association of polymorphisms in the LEDGF/p75 gene (PSIP1) with susceptibility to HIV-1 infection and disease progression
  2. Madlala, P.; Gijsbers, R.; Christ, F.; Hombrouck, A.; Werner, L.; Mlisana, K.; An, P.; Karim, S. S. A.; Winkler, C. A.; Debyser, Z.; Ndung'u, T.
  3. Aids. 2011, Sep; 25(14): 1711-1719.
  1. 13.   The Nonnucleoside Reverse Transcriptase Inhibitor MIV-150 in Carrageenan Gel Prevents Rectal Transmission of Simian/Human Immunodeficiency Virus Infection in Macaques
  2. Singer, R.; Derby, N.; Rodriguez, A.; Kizima, L.; Kenney, J.; Aravantinou, M.; Chudolij, A.; Gettie, A.; Blanchard, J.; Lifson, J. D.; Piatak, M.; Fernandez-Romero, J. A.; Zydowsky, T. M.; Robbiani, M.
  3. Journal of Virology. 2011, Jun; 85(11): 5504-5512.
  1. 14.   HLA-A*7401-Mediated Control of HIV Viremia Is Independent of Its Linkage Disequilibrium with HLA-B*5703
  2. Matthews, P. C.; Adl, E.; Listgarten, J.; Leslie, A.; Mkhwanazi, N.; Carlson, J. M.; Harndahl, M.; Stryhn, A.; Payne, R. P.; Ogwu, A.; Huang, K. H. G.; Frater, J.; Paioni, P.; Kloverpris, H.; Jooste, P.; Goedhals, D.; van Vuuren, C.; Steyn, D.; Riddell, L.; Chen, F.; Luzzi, G.; Balachandran, T.; Ndung'u, T.; Buus, S.; Carrington, M.; Shapiro, R.; Heckerman, D.; Goulder, P. J. R.
  3. Journal of Immunology. 2011, May; 186(10): 5675-5686.
  1. 15.   An Antiretroviral/Zinc Combination Gel Provides 24 Hours of Complete Protection against Vaginal SHIV Infection in Macaques
  2. Kenney, J.; Aravantinou, M.; Singer, R.; Hsu, M.; Rodriguez, A.; Kizima, L.; Abraham, C. J.; Menon, R.; Seidor, S.; Chudolij, A.; Gettie, A.; Blanchard, J.; Lifson, J. D.; Piatak, M.; Fernandez-Romero, J. A.; Zydowsky, T. M.; Robbiani, M.
  3. Plos One. 2011, Jan; 6(1): 10.
  1. 16.   HLA/KIR Restraint of HIV: Surviving the Fittest
  2. Bashirova, A. A.; Thomas, R.; Carrington, M.; Paul, W. E.; Littman, D. R.; Yokoyama, W. M.
  3. Annual Review of Immunology. 2011 29: 295-317.
  1. 17.   HLA-B alleles associate consistently with HIV heterosexual transmission, viral load, and progression to AIDS, but not susceptibility to infection
  2. Gao, X. J.; O'Brien, T. R.; Welzel, T. M.; Marti, D.; Qi, Y.; Goedert, J. J.; Phair, J.; Pfeiffer, R.; Carrington, M.
  3. Aids. 2010, Jul; 24(12): 1835-1840.
  1. 18.   Enhanced Anti-HIV Functional Activity Associated with Gag-Specific CD8 T-Cell Responses
  2. Julg, B.; Williams, K. L.; Reddy, S.; Bishop, K.; Qi, Y.; Carrington, M.; Goulder, P. J.; Ndung'u, T.; Walker, B. D.
  3. Journal of Virology. 2010, Jun; 84(11): 5540-5549.
  1. 19.   Host Determinants of HIV-1 Control in African Americans
  2. Pelak, K.; Goldstein, D. B.; Walley, N. M.; Fellay, J.; Ge, D.; Shianna, K. V.; Gumbs, C.; Gao, X.; Maia, J. M.; Cronin, K. D.; Hussain, S. K.; Carrington, M.; Michael, N. L.; Weintrob, A. C.; Natl Inst Allergy Infect, D.
  3. Journal of Infectious Diseases. 2010, Apr; 201(8): 1141-1149.
  1. 20.   MHC Heterozygote Advantage in Simian Immunodeficiency Virus-Infected Mauritian Cynomolgus Macaques
  2. O'Connor, S. L.; Lhost, J. J.; Becker, E. A.; Detmer, A. M.; Johnson, R. C.; MacNair, C. E.; Wiseman, R. W.; Karl, J. A.; Greene, J. M.; Burwitz, B. J.; Bimber, B. N.; Lank, S. M.; Tuscher, J. J.; Mee, E. T.; Rose, N. J.; Desrosiers, R. C.; Hughes, A. L.; Friedrich, T. C.; Carrington, M.; O'Connor, D. H.
  3. Science Translational Medicine. 2010, Mar; 2(22): 9.
  1. 21.   Repeated DNA therapeutic vaccination of chronically SIV-infected macaques provides additional virological benefit
  2. Valentin, A.; von Gegerfelt, A.; Rosati, M.; Miteloudis, G.; Alicea, C.; Bergamaschi, C.; Jalah, R.; Patel, V.; Khan, A. S.; Draghia-Akli, R.; Pavlakis, G. N.; Felber, B. K.
  3. Vaccine. 2010, Feb; 28(8): 1962-1974.
  1. 22.   Syphilis co-infection does not affect HIV disease progression
  2. Weintrob, A. C.; Gu, W.; Qin, J.; Robertson, J.; Ganeson, A.; Crum-Cianflone, N. F.; Landrum, M. L.; Wortmann, G. W.; Foliman, D.; Agan, B. K.
  3. International Journal of Std & Aids. 2010, Jan; 21(1): 57-59.
  1. 23.   Impact of Select Immunologic and Virologic Biomarkers on CD4 Cell Count Decrease in Patients with Chronic HIV-1 Subtype C Infection: Results from Sinikithemba Cohort, Durban, South Africa
  2. Brumme, Z.; Wang, B. X.; Nair, K.; Brumme, C.; de Pierres, C.; Reddy, S.; Julg, B.; Moodley, E.; Thobakgale, C.; Lu, Z.; van der Stok, M.; Bishop, K.; Mncube, Z.; Chonco, F.; Yuki, Y.; Frahm, N.; Brander, C.; Carrington, M.; Freedberg, K.; Kiepiela
  3. Clinical Infectious Diseases. 2009 49(6): 956-964.
  1. 24.   HLA-Associated Clinical Progression Correlates with Epitope Reversion Rates in Early Human Immunodeficiency Virus Infection
  2. Duda, A.; Lee-Turner, L.; Fox, J.; Robinson, N.; Dustan, S.; Kaye, S.; Fryer, H.; Carrington, M.; McClure, M.; Mclean, A. R.; Fidler, S.; Weber, J.; Phillips, R. E.; Frater, A. J.
  3. Journal of Virology. 2009 83(3): 1228-1239.
  1. 25.   Anti-retroviral therapy fails to restore the severe Th-17: Tc-17 imbalance observed in peripheral blood during simian immunodeficiency virus infection
  2. Kader, M.; Bixler, S.; Piatak, M.; Lifson, J.; Mattapallil, J. J.
  3. Journal of Medical Primatology. 2009 38: 32-38.
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