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  1. 1.   Noncanonical circRNA biogenesis driven by alpha and gamma herpesviruses
  2. Dremel, Sarah E; Koparde,Vishal; Arbuckle, Jesse H; Hogan, Chad H; Kristie, Thomas M; Krug, Laurie T; Conrad, Nicholas K; Ziegelbauer, Joseph M
  3. The EMBO Journal. 2025, Mar 03;
  1. 2.   Improvements in large-scale production of Tobacco Etch Virus protease
  2. Messing,Simon; Barnhart,Kirsten; Drew,Matt; Granato-Guerrero,Natalie; Grose,Carissa; Higgins,Brianna; Hong,Min; Hull,Jenna; Perkins,Shelley; Poon,Ivy; Ramakrishnan,Nitya; Seabolt,Amanda; Taylor,Troy; Wall,Vanessa; Wright,Nick; Gillette,Bill; Esposito,Dom
  3. Protein Expression and Purification. 2024, Dec 14; 106648.
  1. 3.   A KSHV RNA-binding protein promotes FOS to inhibit nuclease AEN and transactivate RGS2 for AKT phosphorylation
  2. Majerciak,Vladimir; Alvarado-Hernandez, Beatriz; Ma, Yanping; Duduskar, Shivalee; Lobanov, Alexei; Cam, Maggie; Zheng,Zhi-Ming
  3. mBio. 2024, Dec 10; e0317224.
  1. 4.   Matrin3 regulates mitotic spindle dynamics by controlling alternative splicing of CDC14B
  2. Muys, Bruna R; Shrestha, Roshan L; Anastasakis, Dimitrios G; Pongor, Lorinc; Li, Xiao Ling; Grammatikakis, Ioannis; Polash, Ahsan; Chari,Raj; Gorospe, Myriam; Harris, Curtis C; Aladjem, Mirit I; Basrai, Munira A; Hafner, Markus; Lal, Ashish
  3. Cell Reports. 2023, Mar 15; 42(3): 112260.
  1. 5.   Microarray-guided evaluation of the frequency, B cell origins, and selectivity of human glycan-binding antibodies reveals new insights and novel antibodies
  2. Temme,Sebastian; Crainic, Jennifer A; Walker, Laura M; Yang, Weizhun; Tan, Zibin; Huang, Xuefei; Gildersleeve,Jeffrey
  3. The Journal of Biological Chemistry. 2022, Sep 07; 298 (10): 102468.
  1. 6.   Systematic exploration of dynamic splicing networks reveals conserved multistage regulators of neurogenesis
  2. Han, Hong; Best, Andrew J; Braunschweig, Ulrich; Mikolajewicz, Nicholas; Li, Jack Daiyang; Roth, Jonathan; Chowdhury, Fuad; Mantica, Federica; Nabeel-Shah, Syed; Parada, Guillermo; Brown, Kevin R; O'Hanlon, Dave; Wei, Jiarun; Yao, Yuxi; Zid, Abdelrahman Abou; Comsa, Lim Caden; Jen, Mark; Wang, Jenny; Datti, Alessandro; Gonatopoulos Pournatzis,Thomas; Weatheritt, Robert J; Greenblatt, Jack F; Wrana, Jeffrey L; Irimia, Manuel; Gingras, Anne-Claude; Moffat, Jason; Blencowe, Benjamin J
  3. Molecular Cell. 2022, Jul 31; 82(16): 2982-2999.
  1. 7.   Flexible pri-miRNA structures enable tunable production of 5' isomiRs
  2. Bofill De Ros,Xavier; Hong,Zhenyi; Birkenfeld, Ben; Alamo-Ortiz,Sarangelica; Yang,Acong; Dai,Lisheng; Gu,Shuo
  3. RNA Biology. 2022, Jan; 19(1): 279-289.
  1. 8.   Characterizing Expression and Regulation of Gamma-Herpesviral Circular RNAs
  2. Tagawa, Takanobu; Oh, Daniel; Santos, Jerico; Dremel, Sarah; Mahesh, Guruswamy; Uldrick, Thomas S; Yarchoan, Robert; Koparde,Vishal; Ziegelbauer, Joseph M
  3. Frontiers in microbiology. 2021, Jun 30; 12: 670542.
  1. 9.   G-quadruplexes offer a conserved structural motif for NONO recruitment to NEAT1 architectural lncRNA
  2. Simko,Eric; Liu, Honghe; Zhang, Tao; Velasquez, Adan; Teli, Shraddha; Haeusler, Aaron R.; Wang, Jiou
  3. NUCLEIC ACIDS RESEARCH. 2020, JUL 27; 48(13): 7421-7438.
  1. 10.   The RNA exosome nuclease complex regulates human embryonic stem cell differentiation
  2. Belair,Cedric; Sim,Soyeong; Kim, Kun-Yong; Tanaka, Yoshiaki; Park, In-Hyun; Wolin,Sandra
  3. The Journal of cell biology. 2019, AUG; 218(8): 2564-2582.
  1. 11.   Crystal structure of the Schizosaccharomyces pombe U7BR E2-binding region in complex with Ubc7
  2. Hann, Zachary S; Metzger,Meredith; Weissman,Allan; Lima, Christopher D
  3. Acta crystallographica. Section F, Structural biology communications. 2019, Aug 01; 75(Pt 8): 552-560.
  1. 12.   Disruption of the Rbm38-eIF4E Complex with a Synthetic Peptide Pep8 Increases p53 Expression
  2. Lucchesi, Christopher A.; Zhang, Jin; Ma, Buyong; Chen, Mingyi; Chen, Xinbin
  3. CANCER RESEARCH. 2019, FEB 15; 79(4): 807-818.
  1. 13.   Combined treatment with HMGN1 and anti-CD4 depleting antibody reverses T cell exhaustion and exerts robust anti-tumor effects in mice
  2. Chen, Chang-Yu; Ueha, Satoshi; Ishiwata, Yoshiro; Yokochi, Shoji; Yang,De; Oppenheim,Joost; Ogiwara, Haru; Shichino, Shigeyuki; Deshimaru, Shungo; Shand, Francis H W; Shibayama, Shiro; Matsushima, Kouji
  3. Journal for immunotherapy of cancer. 2019, Jan 29; 7(1): 21.
  1. 14.   Genome-Wide Profiling of Cervical RNA-Binding Proteins Identifies Human Papillomavirus Regulation of RNASEH2A Expression by Viral E7 and E2F1
  2. Xu, Junfen; Liu, Habin; Yang, Yanqin; Wang, Xiaohong; Liu, Poching; Li, Yang; Meyers, Craig; Banerjee, Nilam Sanjib; Wang, Hsu-Kun; Cam, Maggie; Lu, Weiguo; Chow, Louise T.; Xie, Xing; Zhu, Jun; Zheng,Zhi-Ming
  3. MBIO. 2019, Jan-Feb; 10(1):
  1. 15.   Structure and function of Rnt1p: An alternative to RNAi for targeted RNA degradation
  2. Abou Elela, Sherif; Ji,Xinhua
  3. Wiley interdisciplinary reviews. RNA. 2019, May-Jun; 10(3):
  1. 16.   RNA-Protein Interactions Prevent Long RNA Duplex Formation: Implications for the Design of RNA-Based Therapeutics
  2. Bindewald, Eckart; Dai, Lisheng; Kasprzak, Wojciech; Kim, Taejin; Gu, Shuo; Shapiro, Bruce
  3. MOLECULES. 2018, Dec; 23(12):
  1. 17.   ALS/FTD-Linked Mutation in FUS Suppresses Infra-axonal Protein Synthesis and Drives Disease Without Nuclear Loss-of-Function of FUS
  2. Lopez-Erauskin, Jone; Tadokoro, Takahiro; Baughn, Michael W.; Myers, Brian; McAlonis-Downes, Melissa; Chillon-Marinas, Carlos; Asiaban, Joshua N.; Artates, Jonathan; Bui, Anh T.; Vetto, Anne P.; Lee, Sandra K.; Le, Ai Vy; Sun, Ying; Jambeau, Melanie; Boubaker, Jihane; Swing, Debbie; Qiu, Jinsong; Hicks, Geoffrey G.; Ouyang, Zhengyu; Fu, Xiang-Dong; Tessarollo, Lino; Ling, Shuo-Chien; Parone, Philippe A.; Shaw, Christopher E.; Marsala, Martin; lagier-Tourenne, ClotilDe; Cleveland, Don W.; Da Cruz, Sandrine
  3. Neuron. 2018, NOV 21; 100(4): 816-+.
  1. 18.   Inhibition of Bacterial Gene Transcription with an RpoN-Based Stapled Peptide
  2. Payne, Sterling R; Pau, Daniel I; Whiting, Amanda L; Kim, Ye Joon; Pharoah, Blaze M; Moi, Christina; Boddy, Christopher N; Bernal, Federico
  3. Cell Chemical Biology. 2018, Sep 20; 25(9): 1059-1066.e4.
  1. 19.   MBP-binding DARPins facilitate the crystallization of an MBP fusion protein
  2. Gumpena, Rajesh; Lountos, George; Waugh, David
  3. Acta Crystallographica. Section F, Structural Biology Communications. 2018, Sep 01; 74(Pt 9): 549-557.
  1. 20.   High-Mobility Group Nucleosome-Binding Protein 1 as Endogenous Ligand Induces Innate Immune Tolerance in a TLR4-Sirtuin-1 Dependent Manner in Human Blood Peripheral Mononuclear Cells
  2. Arts, Rob J W; Huang, Po-Kai; Yang, De; Joosten, Leo A B; van der Meer, Jos W M; Oppenheim, Joost; Netea, Mihai G; Cheng, Shih-Chin
  3. Frontiers in Immunology. 2018, Mar 14; 9: 526.
  1. 21.   Crystal structure of the human dual specificity phosphatase 1 catalytic domain
  2. Gumpena, Rajesh; Lountos, George; Raran-Kurussi, Sreejith; Tropea, Joseph; Cherry, Scott; Waugh, David
  3. Protein science : a publication of the Protein Society. 2018, Feb; 27(2): 561-567.
  1. 22.   Englerin A Inhibits EWS-FLI1 DNA Binding in Ewing Sarcoma Cells
  2. Caropreso, V.; Darvishi, E.; Turbyville, T. J.; Ratnayake, R.; Grohar, P. J.; McMahon, J. B.; Woldemichael, G. M.
  3. The Journal of biological chemistry. 2016, 6-May; 291(19): 10058-66.
  1. 23.   PUMILIO-2 Is Involved in the Positive Regulation of Cellular Proliferation in Human Adipose-Derived Stem Cells
  2. Shigunov, P.; Sotelo-Silveira, J.; Kuligovski, C.; de Aguiar, A. M.; Rebelatto, C. K.; Moutinho, J. A.; Brofman, P. S.; Krieger, M. A.; Goldenberg, S.; Munroe, D.; Correa, A.; Dallagiovanna, B.
  3. Stem Cells and Development. 2012, Jan; 21(2): 217-227.
  1. 24.   Eph/ephrin signaling in cell-cell and cell-substrate adhesion
  2. Singh, A.; Winterbottom, E.; Daar, I. O.
  3. Frontiers in Bioscience-Landmark. 2012, Jan; 17: 473-497.
  1. 25.   An overview of enzymatic reagents for the removal of affinity tags
  2. Waugh, D. S.
  3. Protein Expression and Purification. 2011, Dec; 80(2): 283-293.
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