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  1. 1.   HIV Rebound Is Predominantly Fueled by Genetically Identical Viral Expansions from Diverse Reservoirs
  2. De Scheerder, Marie-Angélique; Vrancken, Bram; Dellicour, Simon; Schlub, Timothy; Lee, Eunok; Shao,Wei; Rutsaert, Sofie; Verhofstede, Chris; Kerre, Tessa; Malfait, Thomas; Hemelsoet, Dimitri; Coppens, Marc; Dhondt, Annemieke; De Looze, Danny; Vermassen, Frank; Lemey, Philippe; Palmer, Sarah; Vandekerckhove, Linos
  3. Cell host & microbe. 2019, SEP 11; 26(3): 347-+.
  1. 2.   Phylogenetic inference for the study of within-host HIV-1 dynamics and persistence on antiretroviral therapy
  2. Capoferri, Adam A.; Bale,Michael; Simonetti, Francesco R.; Kearney,Mary
  3. The lancet. HIV. 2019, May; 6(5): E325-E333.
  1. 3.   Adaptive evolution of the matrix extracellular phosphoglycoprotein in mammals
  2. Machado, J. P.; Johnson, W. E.; O'Brien, S. J.; Vasconcelos, V.; Antunes, A.
  3. Bmc Evolutionary Biology. 2011, Nov; 11
  1. 4.   Interleukin-26: An IL-10-related cytokine produced by Th17 cells
  2. Donnelly, R. P.; Sheikh, F.; Dickensheets, H.; Savan, R.; Young, H. A.; Walter, M. R.
  3. Cytokine & Growth Factor Reviews. 2010, Oct; 21(5): 393-401.
  1. 5.   Low Frequency Nonnucleoside Reverse-Transcriptase Inhibitor-Resistant Variants Contribute to Failure of Efavirenz-Containing Regimens in Treatment-Experienced Patients
  2. Halvas, E. K.; Wiegand, A.; Boltz, V. F.; Kearney, M.; Nissley, D.; Wantman, M.; Hammer, S. M.; Palmer, S.; Vaida, F.; Coffin, J. M.; Mellors, J. W.
  3. Journal of Infectious Diseases. 2010, Mar; 201(5): 672-680.
  1. 6.   Feline immunodeficiency virus (FIV) in wild Pallas' cats
  2. Brown, M. A.; Munkhtsog, B.; Troyer, J. L.; Ross, S.; Sellers, R.; Fine, A. E.; Swanson, W. F.; Roelke, M. E.; O'Brien, S. J.
  3. Veterinary Immunology and Immunopathology. 2010, Mar; 134(1-2): 90-95.
  1. 7.   Overproduction, purification and structure determination of human dual-specificity phosphatase 14
  2. Lountos, G. T.; Tropea, J. E.; Cherry, S.; Waugh, D. S.
  3. Acta crystallographica. Section D, Biological crystallography. 2009, Oct; 65(Pt 10): 1013-20.
  1. 8.   Bioconjugation and detection of lactosamine moiety using alpha1,3-galactosyltransferase mutants that transfer C2-modified galactose with a chemical handle
  2. Pasek, M.; Ramakrishnan, B.; Boeggeman, E.; Manzoni, M.; Waybright, T. J.; Qasba, P. K.
  3. Bioconjugate Chemistry. 2009, Mar 18; 20(3): 608-18.
  1. 9.   A Novel System of Polymorphic and Diverse NK Cell Receptors in Primates
  2. Averdam, A.; Petersen, B.; Rosner, C.; Neff, J.; Roos, C.; Eberle, M.; Aujard, F.; Munich, C.; Schempp, W.; Carrington, M.; Shiina, T.; Inoko, H.; Knaust, F.; Coggill, P.; Sehra, H.; Beck, S.; Abi-Rached, L.; Reinhardt, R.; Walter, L.
  3. Plos Genetics. 2009 5(10):
  1. 10.   Genetics and Pathogenesis of Feline Infectious Peritonitis Virus
  2. Brown, M. A.; Troyer, J. L.; Pecon-Slattery, J.; Roelke, M. E.; O'Brien, S. J.
  3. Emerging Infectious Diseases. 2009 15(9): 1445-1452.
  1. 11.   Genetic characterization of feline leukemia virus from Florida panthers
  2. Brown, M. A.; Cunningham, M. W.; Roca, A. L.; Troyer, J. L.; Johnson, W. E.; O'Brien, S. J.
  3. Emerging Infectious Diseases. 2008 14(2): 252-259.
  1. 12.   The chemical defensome: Environmental sensing and response genes in the Strongylocentrotus purpuratus genome
  2. Goldstone, J. V.; Hamdoun, A.; Cole, B. J.; Howard-Ashby, M.; Nebert, D. W.; Scally, M.; Dean, M.; Epel, D.; Hahn, M. E.; Stegeman, J. J.
  3. Developmental Biology. 2006, Dec; 300(1): 366-384.
  1. 13.   Correlated mutations: Advances and limitations. A study on fusion proteins and on the cohesin-dockerin families
  2. Halperin, I.; Wolfson, H.; Nussinov, R.
  3. Proteins-Structure Function and Bioinformatics. 2006, Jun; 63(4): 832-845.
  1. 14.   The essential vertebrate ABCE1 protein interacts with eukaryotic initiation factors
  2. Chen, Z. Q.; Dong, J. S.; Ishimura, A.; Daar, I.; Hinnebusch, A. G.; Dean, M.
  3. Journal of Biological Chemistry. 2006, Mar; 281(11): 7452-7457.
  1. 15.   Optimization of multiple-sequence alignment based on multiple-structure alignment
  2. Shatsky, M.; Nussinov, R.; Wolfson, H. J.
  3. Proteins-Structure Function and Bioinformatics. 2006, JAN 1; 62(1): 209-217.
  1. 16.   RNA secondary structure prediction from sequence alignments using a network of k-nearest neighbor classifiers
  2. Bindewald, E.; Shapiro, B. A.
  3. Rna-a Publication of the Rna Society. 2006 12(3): 342-352.
  1. 17.   Mutations in the RNase H primer grip domain of murine leukemia virus reverse transcriptase decrease efficiency and accuracy of plus-strand DNA transfer
  2. Mbisa, J. L.; Nikolenko, G. N.; Pathak, V. K.
  3. Journal of Virology. 2005, JAN; 79(1): 419-427.
  1. 18.   Integrase of Mason-Pfizer monkey virus
  2. Snasel, J.; Krejcik, Z.; Jencova, V.; Rosenberg, I.; Ruml, T.; Alexandratos, J.; Gustchina, A.; Pichova, I.
  3. Febs Journal. 2005, JAN; 272(1): 203-216.
  1. 19.   A structural similarity analysis of double-helical DNA
  2. Gardiner, E. J.; Hunter, C. A.; Lu, X. J.; Willett, P.
  3. Journal of Molecular Biology. 2004, OCT 29; 343(4): 879-889.
  1. 20.   A robust measure of HIV-1 population turnover within chronically infected individuals
  2. Achaz, G.; Palmer, S.; Kearney, M.; Maldarelli, F.; Mellors, J. W.; Coffin, J. M.; Wakeley, J.
  3. Molecular Biology and Evolution. 2004, OCT; 21(10): 1902-1912.
  1. 21.   Differential B cell expression of mouse Fc receptor homologs
  2. Davis, R. S.; Stephan, R. P.; Chen, C. C.; Dennis, G.; Cooper, M. D.
  3. International Immunology. 2004, SEP; 16(9): 1343-1353.
  1. 22.   Multiple structural alignment by secondary structures: Algorithm and applications
  2. Dror, O.; Benyamini, H.; Nussinov, R.; Wolfson, H. J.
  3. Protein Science. 2003 12(11): 2492-2507.
  1. 23.   The palm subdomain-based active site is internally permuted in viral RNA-dependent RNA polymerases of an ancient lineage
  2. Gorbalenya, A. E.; Pringle, F. M.; Zeddam, J. L.; Luke, B. T.; Cameron, C. E.; Kalmakoff, J.; Hanzlik, T. N.; Gordon, K. H. J.; Ward, V. K.
  3. Journal of Molecular Biology. 2002 324(1): 47-62.
  1. 24.   Molecular analysis of three Ljungan virus isolates reveals a new, close-to-root lineage of the Picornaviridae with a cluster of two unrelated 2A proteins
  2. Johansson, S.; Niklasson, B.; Maizel, J.; Gorbalenya, A. E.; Lindberg, A. M.
  3. Journal of Virology. 2002 76(17): 8920-8930.
  1. 25.   The autocatalytic release of a putative RNA virus transcription factor from its polyprotein precursor involves two paralogous papain-like proteases that cleave the same peptide bond
  2. Ziebuhr, J.; Thiel, V.; Gorbalenya, A. E.
  3. Journal of Biological Chemistry. 2001 276(35): 33220-33232.
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