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  1. 1.   Structure-based design of glycoprotein subunit vaccines for mumps
  2. Loomis, Rebecca J; Lai, Yen-Ting; Sowers, Sun B; Fisher, Brian; Derrien-Colemyn, Alexandrine; Ambrozak, David R; Tsybovsky,Yaroslav; Crooke, Stephen N; Latner, Donald R; Kong, Wing-Pui; Ruckwardt, Tracy J; Plotkin, Stanley A; Kwong, Peter D; Mascola, John R; Graham, Barney S; Hickman, Carole J; Stewart-Jones, Guillaume B E
  3. Proceedings of the National Academy of Sciences of the United States of America. 2024, Nov 19; 121(47): e2404053121.
  1. 2.   An intranasally administrated SARS-CoV-2 beta variant subunit booster vaccine prevents beta variant replication in rhesus macaques
  2. Sui, Yongjun; Li, Jianping; Andersen, Hanne; Zhang, Roushu; Prabhu, Sunaina K; Hoang, Tanya; Venzon, David; Cook, Anthony; Brown, Renita; Teow, Elyse; Velasco, Jason; Pessaint, Laurent; Moore, Ian N; Lagenaur, Laurel; Talton, Jim; Breed,Matthew; Kramer,Josh; Bock, Kevin W; Minai, Mahnaz; Nagata, Bianca M; Choo-Wosoba, Hyoyoung; Lewis, Mark G; Wang, Lai-Xi; Berzofsky, Jay A
  3. PNAS Nexus. 2022, Jul; 1(3): pgac091.
  1. 3.   Structure-guided bifunctional molecules hit a DEUBAD-lacking hRpn13 species upregulated in multiple myeloma
  2. Lu, Xiuxiu; Sabbasani, Venkata R.; Osei-Amponsa, Vasty; Evans, Christine N.; King, Julianna C.; Tarasov, Sergey G.; Dyba, Marzena; Das, Sudipto; Chan, King C.; Schwieters, Charles D.; Choudhari, Sulbha; Fromont, Caroline; Zhao, Yongmei; Tran, Bao; Chen, Xiang; Matsuo, Hiroshi; Andresson, Thorkell; Chari, Raj; Swenson, Rolf E.; Tarasova, Nadya I.; Walters, Kylie J.
  3. Nature Communications. 2021, Dec 16; 12(1):
  1. 4.   Structural analyses of the PKA RII beta holoenzyme containing the oncogenic DnaJB1-PKAc fusion protein reveal protomer asymmetry and fusion-induced allosteric perturbations in fibrolamellar hepatocellular carcinoma
  2. Lu, Tsan-Wen; Aoto, Phillip C.; Weng, Jui-Hung; Nielsen, Cole; Cash, Jennifer N.; Hall, James; Zhang,Ping; Simon, Sanford M.; Cianfrocco, Michael A.; Taylor, Susan S.
  3. PLOS BIOLOGY. 2020, Dec; 18(12):
  1. 5.   Structural Features that Distinguish Inactive and Active PI3K Lipid Kinases
  2. Zhang,Mingzhen; Jang,Hyunbum; Nussinov,Ruth
  3. Journal of molecular biology. 2020, NOV 6; 432(22): 5849-5859.
  1. 6.   Cryo-EM Reveals Unanchored M1-Ubiquitin Chain Binding at hRpn11 of the 26S Proteasome
  2. Chen,Xiang; Dorris, Zachary; Shi,Dan; Huang, Rick K; Khant,Htet; Fox,Tara; De Val Alda,Natalia; Williams, Dewight; Zhang,Ping; Walters,Kylie
  3. Structure (London, England : 1993). 2020, NOV 3; 28(11): 1206-+.
  1. 7.   Structure of E3 ligase E6AP with a proteasome-binding site provided by substrate receptor hRpn10
  2. Buel,Gwen; Chen,Xiang; Chari,Raj; O'Neill, Maura J; Ebelle, Danielle L; Jenkins, Conor; Sridharan, Vinidhra; Tarasov,Sergey; Tarasova,Nadya; Andresson,Thorkell; Walters,Kylie
  3. Nature communications. 2020, Mar 10; 11(1): 1291.
  1. 8.   The Role of Pyrophosphorolysis in the Initiation-to-Elongation Transition by E. coli RNA Polymerase
  2. Imashimizu, Masahiko; Kireeva, Maria L; Lubkowska,Lucyna; Kashlev,Mikhail; Shimamoto, Nobuo
  3. Journal of molecular biology. 2019, Jun 28; 431(14): 2528-2542.
  1. 9.   The mechanism of PI3K activation at the atomic level
  2. Zhang,Mingzhen; Jang,Hyunbum; Nussinov,Ruth
  3. Chemical science. 2019, Mar 28; 10(12): 3671-3680.
  1. 10.   Calmodulin (CaM) Activates PI3K alpha by Targeting the "Soft" CaM-Binding Motifs in Both the nSH2 and cSH2 Domains of p85 alpha
  2. Zhang,Mingzhen; Li, Zhigang; Wang, Guanqiao; Jang,Hyunbum; Sacks, David B.; Zhang, Jian; Gaponenko, Vadim; Nussinov,Ruth
  3. JOURNAL OF PHYSICAL CHEMISTRY B. 2018, Dec 13; 122(49): 11137-11146.
  1. 11.   A dynamic hydrophobic core orchestrates allostery in protein kinases
  2. Kim, Jonggul; Ahuja, Lalima G.; Chao, Frank; Xia, Youlin; McClendon, Christopher L.; Kornev, Alexandr P.; Taylor, Susan S.; Veglia, Gianluigi
  3. SCIENCE ADVANCES. 2017, APR; 3(4):
  1. 12.   A High Affinity hRpn2-Derived Peptide That Displaces Human Rpn13 from Proteasome in 293T Cells
  2. Lu, X. X.; Liu, F.; Durham, S. E.; Tarasov, S. G.; Walters, K. J.
  3. Plos One. 2015, Oct; 10(10):
  1. 13.   Gene-specific transcription activation via long-range allosteric shape-shifting
  2. Tsai, C. J.; Nussinov, R.
  3. Biochemical Journal. 2011, Oct; 439: 15-25.
  1. 14.   Dynamic Allostery: Linkers Are Not Merely Flexible
  2. Ma, B. Y.; Tsai, C. J.; Haliloglu, T.; Nussinov, R.
  3. Structure. 2011, Jul; 19(7): 907-917.
  1. 15.   The Era GTPase recognizes the GAUCACCUCC sequence and binds helix 45 near the 3 ' end of 16S rRNA
  2. Tu, C.; Zhou, X. M.; Tarasov, S. G.; Tropea, J. E.; Austin, B. P.; Waugh, D. S.; Court, D. L.; Ji, X. H.
  3. Proceedings of the National Academy of Sciences of the United States of America. 2011, Jun; 108(25): 10156-10161.
  1. 16.   Cloning, expression, purification, crystallization and preliminary X-ray diffraction data of the Pyrococcus horikoshii RadA intein
  2. Lyskowski, A.; Oeemig, J. S.; Jaakkonen, A.; Rommi, K.; DiMaio, F.; Zhou, D. W.; Kajander, T.; Baker, D.; Wlodawer, A.; Goldman, A.; Iwai, H.
  3. Acta Crystallographica Section F-Structural Biology and Crystallization Communications. 2011, May; 67: 623-626.
  1. 17.   The ARMS/Kidins220 scaffold protein modulates synaptic transmission
  2. Arevalo, J. C.; Wu, S. H.; Takahashi, T.; Zhang, H.; Yu, T.; Yano, H.; Milner, T. A.; Tessarollo, L.; Ninan, I.; Arancio, O.; Chao, M. V.
  3. Molecular and Cellular Neuroscience. 2010, Oct; 45(2): 92-100.
  1. 18.   Impact of synchrotron radiation on macromolecular crystallography: a personal view
  2. Dauter, Z.; Jaskolski, M.; Wlodawer, A.
  3. Journal of Synchrotron Radiation. 2010, Jul; 17: 433-444.
  1. 19.   Solution structure of the cap-independent translational enhancer and ribosome-binding element in the 3 ' UTR of turnip crinkle virus
  2. Zuo, X. B.; Wang, J. B.; Yu, P.; Eyler, D.; Xu, H.; Starich, M. R.; Tiede, D. M.; Simon, A. E.; Kasprzak, W.; Schwieters, C. D.; Shapiro, B. A.; Wang, Y. X.
  3. Proceedings of the National Academy of Sciences of the United States of America. 2010, Jan 26; 107(4): 1385-1390.
  1. 20.   Misfolded amyloid ion channels present mobile beta-sheet subunits in contrast to conventional ion channels
  2. Jang, H.; Arce, F. T.; Capone, R.; Ramachandran, S.; Lal, R.; Nussinov, R.
  3. Biophysical Journal. 2009, Dec 2; 97(11): 3029-37.
  1. 21.   Cytotoxic and HIF-1alpha inhibitory compounds from Crossosoma bigelovii
  2. Klausmeyer, P.; Zhou, Q.; Scudiero, D. A.; Uranchimeg, B.; Melillo, G.; Cardellina, J. H.; Shoemaker, R. H.; Chang, C. J.; McCloud, T. G.
  3. Journal of Natural Products. 2009, May 22; 72(5): 805-12.
  1. 22.   A Neutralizing Human Monoclonal Antibody Protects against Lethal Disease in a New Ferret Model of Acute Nipah Virus Infection
  2. Bossart, K. N.; Zhu, Z. Y.; Middleton, D.; Klippel, J.; Crameri, G.; Bingham, J.; McEachern, J. A.; Green, D.; Hancock, T. J.; Chan, Y. P.; Hickey, A. C.; Dimitrov, D. S.; Wang, L. F.; Broder, C. C.
  3. Plos Pathogens. 2009 5(10):
  1. 23.   A selective small-molecule nuclear factor-kappa B inhibitor from a high-throughput cell-based assay for "activator protein-1 hits"
  2. Kang, M. I.; Henrich, C. J.; Bokesch, H. R.; Gustafson, K. R.; McMahon, J. B.; Baker, A. R.; Young, M. R.; Colburn, N. H.
  3. Molecular Cancer Therapeutics. 2009 8(3): 571-581.
  1. 24.   Transposition into Replicating DNA Occurs through Interaction with the Processivity Factor
  2. Parks, A. R.; Li, Z. P.; Shi, Q. J.; Owens, R. M.; Jin, M. M.; Peters, J. E.
  3. Cell. 2009 138(4): 685-695.
  1. 25.   Structural Basis for Binding of RNA and Cofactor by a KsgA Methyltransferase
  2. Tu, C.; Tropea, J. E.; Austin, B. P.; Court, D. L.; Waugh, D. S.; Ji, X. H.
  3. Structure. 2009 17(3): 374-385.
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