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  1. 1.   Basophil activation test to BNT162b2 lacks specificity for predicting allergic reactions to the mRNA vaccine
  2. Kee, Sydney Ann; Olivera, Ana; Chatman, Lindsay; Khalid, Muhammad B; Li, Min Jenny; Chu,Eric; Zektser, Ellen; Laky, Karen; Frischmeyer-Guerrerio, Pamela A
  3. The Journal of Allergy and Clinical Immunology. Global. 2025, Aug; 4(3): 100495.
  1. 2.   HIVGenoPipe: a nextflow pipeline for the detection of HIV-1 drug resistance using a real-time sample-specific reference sequence
  2. Dotrang,Thoai; Sherman,Brad; Dai,Lisheng; Khan,Muhammad; Highbarger,Helene; Bruchey,Whitney; Laverdure,Sylvain; Baseler,Michael; Imamichi,Tomozumi; Dewar,Robin; Chang,Weizhong
  3. BMC Bioinformatics. 2025, Jul 07; 26(1): 168.
  1. 3.   Kaposi Sarcoma-Associated Herpesvirus Sequencing in People Living With HIV in the Southern United States Reveals Subtype Diversity and Multiple Infections
  2. Marshall,Vickie; Knights, Sheena M; Cornejo Castro,Elena Maria; Labo,Maria Nazzarena; Liu, Isabella; Miley,Wendell; Moore, Kyle N; Goodman,Charles; Carmody,Christine; Keele,Brandon; Lazarte, Susana M; Chiao, Elizabeth Y; Nijhawan, Ank E; Whitby,Denise
  3. Journal of Medical Virology. 2025, Jul; 97(7): e70467.
  1. 4.   TRAIL induces cytokine production via the NFkB2 pathway promoting neutrophil chemotaxis and neutrophil-mediated immune-suppression in triple negative breast cancer cells
  2. Kundu, Manjari; Greer, Yoshimi E; Lobanov, Alexei; Ridnour, Lisa; Donahue, Renee N; Ng, Yeap; Ratnayake, Shashi; White, Karley; Voeller, Donna; Weltz, Sarah; Chen, Qingrong; Lockett,Stephen; Cam, Maggie; Meerzaman, Daoud; Wink, David A; Weigert, Roberto; Lipkowitz, Stanley
  3. Cancer Letters. 2025, Jun 28; 620: 217692.
  1. 5.   Antiproliferative Cassaine Diterpenoid Amines from the Leaves and Twigs of the Traditional Thai Medicinal Plant Erythrophleum teysmannii (Kurz) Craib
  2. Orfanoudaki,Maria; Wang,Dongdong; Du,Lin; Ruchirawat, Somsak; Kittakoop, Prasat; Grkovic,Tanja; Mahidol, Chulabhorn; O'Keefe,Barry
  3. Journal of Ethnopharmacology. 2025, Jun 25; 352: 120167.
  1. 6.   Combining a rhesus cytomegalovirus/SIV vaccine with a neutralizing antibody to protect against SIV challenges in rhesus macaques
  2. Coppola, Jessica; Parren, Mara; Bastidas, Raiza; Saye, Karen; Malvin, Jacqueline; Jardine, Joseph G; Gilbride, Roxanne M; Ojha, Sohita; Feltham, Shana; Morrow, David; Barber-Axthelm, Aaron; Bochart, Rachele; Fast,Randy; Oswald, Kelli; Shoemaker,Rebecca; Lifson,Jeffrey; Picker, Louis J; Burton, Dennis R; Hansen, Scott G
  3. Frontiers in Microbiology. 2025, Jun 2; 16: 1592647.
  1. 7.   HPV genotyping agreement between paired cervical cytological sample and biopsy across lesion severity and vaccination
  2. Chen, Shimin; Du, Qiaoyun; Yin,Jian; Xu, Xiaoqian; Chen, Wen; Pan, Qinjing; Zhang, Xun; Hong, Ying; Zhang, Wenhua; Liu, Bin; Cui, Jianfeng; Hu, Shangying; Zhao, Fanghui
  3. Virology Journal. 2025, Jun 02; 22(1): 176.
  1. 8.   Whole-genome sequencing of 1,083 HPV45 cases and controls identifies genetic variants associated with glandular cervical lesions
  2. Koestler, Aimee J; Nelson, Chase W; Yeager,Stella; Chen, Zigui; Mishra,Sambit; Burdett, Laurie; Dean, Michael; Suh-Burgmann, Elizabeth; Lorey, Thomas; Clifford, Gary M; Wentzensen, Nicolas; Castle, Philip E; Schiffman, Mark; Burk, Robert D; Mirabello, Lisa
  3. International Journal of Cancer. 2025, May 05;
  1. 9.   Machine learning-augmented molecular dynamics simulations (MD) reveal insights into the disconnect between affinity and activation of ZTP riboswitch ligands
  2. Fullenkamp, Christopher; Mehdi, Shams; Jones, Christopher; Tenney, Logan; Pichling, Patricio; Prestwood, Peri R; Ferré-D'Amaré, Adrian R; Tiwary, Pratyush; Schneekloth,John
  3. Angewandte Chemie (International ed. in English). 2025, May 01; e202505971.
  1. 10.   The human oral microbiome and risk of colorectal cancer within three prospective cohort studies in the United States
  2. Vogtmann, Emily; Yano, Yukiko; Zouiouich, Semi; Hua,Xing; Wan, Yunhu; Purandare, Vaishnavi; Li, Shilan; Dagnall,Casey; Jones, Kristine; Hicks,Belynda; Hutchinson,Amy; Caporaso, J Gregory; Wheeler, William; Huang, Wen-Yi; Freedman, Neal D; Sandler, Dale P; Beane Freeman, Laura E; Liao, Linda M; Gail, Mitchell H; Shi, Jianxin; Abnet, Christian C; Sinha, Rashmi
  3. Cancer. 2025, Mar 15; 131(6): e35802.
  1. 11.   Noncanonical circRNA biogenesis driven by alpha and gamma herpesviruses
  2. Dremel, Sarah E; Koparde,Vishal; Arbuckle, Jesse H; Hogan, Chad H; Kristie, Thomas M; Krug, Laurie T; Conrad, Nicholas K; Ziegelbauer, Joseph M
  3. The EMBO Journal. 2025, Mar 03;
  1. 12.   Prior SARS-Cov-2 infection affects adaptive immune responses to Omicron BA.4/BA.5 mRNA booster
  2. Wachter, Brianna T; Xu, Qin; Shi, Lihong; Burbelo, Peter D; Myint-Hpu, Kathy; Schwartzberg, Pamela L; Rehman,Tauseef; Dewar,Robin; Boswell, Kristin L; Koup, Richard A; Oguz, Cihan; Imberti, Luisa; Bellusci, Lorenza; Pourhashemi, Sara; Khurana, Surender; Manthiram, Kalpana; Notarangelo, Luigi D; Delmonte, Ottavia M
  3. The journal of Allergy and Clinical Immunology. . 2025, Mar 03;
  1. 13.   Glycoprotein L-deleted single-cycle rhesus cytomegalovirus vectors elicit MHC-E-restricted CD8+ T cells that protect against SIV
  2. Hansen, Scott G; Schell, John B; Marshall, Emily E; Ojha, Sohita; Feltham, Shana; Morrow, David; Hughes, Colette M; Gilbride, Roxanne M; Ford, Julia C; Cleveland-Rubeor, Hilary C; McArdle, Matthew R; Whitmer, Travis; Barber-Axthelm, Aaron; Bochart, Rachelle; Smedley, Jeremy; Oswald,Kelli; Fast,Randy; Shoemaker,Rebecca; Kosmider, Ewelina; Edlefsen, Paul T; Lifson,Jeffrey; Malouli, Daniel; Früh, Klaus; Picker, Louis J
  3. Journal of Immunology (Baltimore, Md. : 1950). 2025, Feb 27;
  1. 14.   Characterization of metabolic and imaging profiles in the diagnosis of succinate dehydrogenase- related hereditary pheochromocytomas and paragangliomas
  2. Hsueh, Jessica Y; Mendhiratta, Neil; Solomon, Julie; Miller, Matthew; Ryan, Beth; Ricketts, Christopher J; Vocke, Cathy D; Crooks, Daniel R; Schmidt,Laura; Merino, Maria; Malayeri, Ashkan A; Linehan, W Marston; Ball, Mark W
  3. Urologic Oncology. 2025, Feb 25;
  1. 15.   Early influenza virus exposure shapes the B cell response to influenza vaccination in individuals 50 years later
  2. Spangler, Abby; Shimberg, Geoffrey D; Mantus, Grace E; Malek, Rory; Cominsky, Lauren Y; Tsybovsky,Yaroslav; Li,Ning; Gillespie, Rebecca A; Ravichandran, Michelle; Creanga, Adrian; Raab, Julie E; Gajjala, Suprabhath R; Mendoza, Floreliz; Houser, Katherine V; Dropulic, Lesia; McDermott, Adrian B; Kanekiyo, Masaru; Andrews, Sarah F
  3. Immunity. 2025, Feb 25;
  1. 16.   Olaparib in treatment-refractory isocitrate dehydrogenase 1 (IDH1)- and IDH2-mutant cholangiocarcinoma: Safety and antitumor activity from the phase 2 National Cancer Institute 10129 trial
  2. Cecchini, Michael; Pilat, Mary Jo; Uboha, Nataliya; Azad, Nilofer S; Cho, May; Davis, Elizabeth J; Ahnert, Jordi Rodon; Tinoco, Gabriel; Shapiro, Geoffrey I; Khagi, Simon; Powers, Benjamin; Spencer, Kristen; Groisberg, Roman; Drappatz, Jan; Chen, Li; Das,Bishu; Bao, Xun; Li, Jing; Narayan, Azeet; Vu, Dennis; Patel, Abhijit; Niger, Monica; Doroshow, Deborah; Durecki, Diane; Boerner, Scott A; Bindra, Ranjit; Ivy, Percy; Shyr, Derek; Shyr, Yu; LoRusso, Patricia M
  3. Cancer. 2025, Feb 15; 131(4): e35755.
  1. 17.   Proteomic and serologic assessments of responses to mRNA-1273 and BNT162b2 vaccines in human recipient sera
  2. Hickey,Thomas; Mudunuri,Uma; Hempel,Heidi; Kemp,Troy; Roche,Nancy; Talsania, Keyur; Sellers, Brian A; Cherry, James M; Pinto,Ligia
  3. Frontiers in Immunology. 2025, Jan 27; 15: 1502458.
  1. 18.   Longitudinal single-cell profiles of lung regeneration after viral infection reveal persistent injury-associated cell states
  2. Niethamer, Terren K; Planer, Joseph D; Morley, Michael P; Babu, Apoorva; Zhao, Gan; Basil, Maria C; Cantu, Edward; Frank, David B; Diamond, Joshua M; Nottingham, Ana N; Li, Shanru; Sharma,Arnav; Hallquist, Hannah; Levin, Lillian I; Zhou, Su; Vaughan, Andrew E; Morrisey, Edward E
  3. Cell Stem Cell. 2025, Jan 13;
  1. 19.   Coronavirus Disease 2019 (COVID-19) Real World Data Infrastructure: A Big-Data Resource for Study of the Impact of COVID-19 in Patient Populations With Immunocompromising Conditions
  2. Crawford, James M; Penberthy, Lynne; Pinto,Ligia; Althoff, Keri N; Assimon, Magdalene M; Cohen, Oren; Gillim, Laura; Hammonds, Tracy L; Kapur, Shilpa; Kaufman, Harvey W; Kwasny, David; Liew, Jean W; Meyer, William A; Reynolds, Shannon L; Schleicher, Cheryl B; Subbiah, Suki; Theruviparampil, Catherine; Wallace, Zachary S; Warner, Jeremy L; Yoon, Suhyeon; Ziemba, Yonah C
  3. Open Forum Infectious Diseases. 2025, Jan; 12(1): ofaf021.
  1. 20.   HIF1a Plays a Crucial Role in the Development of TFE3-Rearranged Renal Cell Carcinoma by Orchestrating a Metabolic Shift Toward Fatty Acid Synthesis
  2. Nishizawa, Hidekazu; Funasaki, Shintaro; Ma, Wenjuan; Kubota, Yoshiaki; Watanabe, Kazuhide; Arima, Yuichiro; Kuroda, Shoichiro; Ito, Takaaki; Furuya, Mitsuko; Motoshima, Takanobu; Nishiyama, Akira; Mehanna, Sally; Satou, Yorifumi; Hasumi, Hisashi; Jikuya, Ryosuke; Makiyama, Kazuhide; Tamura, Tomohiko; Oike, Yuichi; Tanaka, Yasuhito; Suda, Toshio; Schmidt,Laura; Linehan, W Marston; Baba, Masaya; Kamba, Tomomi
  3. Genes to Cells : devoted to molecular & cellular mechanisms. 2025, Jan; 30(1): e13195.
  1. 21.   Vector induced humoral responses after rVSV?G-ZEBOV-GP immunization identify vaccinated individuals and correlate with Ebola virus glycoprotein antibodies
  2. Chandrasekaran, Prabha; Berry, Irina Maljkovic; Callier,Viviane; Anthony, Scott M; Hensley, Krystle; Kuhn, Jens H; Shaw-Saliba, Kathryn; Kennedy, Stephen B; Kieh, Mark; Browne, Sarah M; Crozier,Ian; Davey, Richard T; Lane, H Clifford; Hensley, Lisa E; Follmann, Dean A
  3. The Journal of Infectious Diseases. 2024, Dec 24;
  1. 22.   The differential interactomes of the KRAS splice variants identify BIRC6 as a ubiquitin ligase for KRAS4A
  2. Kochen Rossi, Juan; Nuevo-Tapioles, Cristina; O'Keefe, Rachel A; Hunkeler, Moritz; Schmoker, Anna M; Fissore-O'Leary, Mercedes; Su, Wenjuan; Ahearn, Ian M; Branco, Cristina; Cheong, Hakyung; Esposito,Dom; Clotea, Ioana; Ueberheide, Beatrix; Fischer, Eric S; Philips, Mark R
  3. Cell Reports. 2024, Dec 19; 44(1): 115087.
  1. 23.   Rapid systemic spread and minimal immune responses following SIVsab intrarectal transmission in African green monkeys
  2. Raehtz, Kevin D; Xu, Cuiling; Deleage,Claire; Ma, Dongzhu; Policicchio, Benjamin B; Brocca-Cofano, Egidio; Piccolo, Daniele; Weaver, Kathryn; Keele,Brandon; Estes, Jacob D; Apetrei, Cristian; Pandrea, Ivona
  3. JCI Insight. 2024, Dec 06; 9(23):
  1. 24.   Immune profile diversity is achieved with synthetic TLR4 agonists combined with the RG1-VLP vaccine in mice
  2. Matthews, Rebecca L; Khan,Nazneen; Beckman,Bradley; Sharma, Simran; Dietz, Zackary; Picking, William D; Izmirlian, Grant; Sanders,Chelsea; Stocks,Stacy; Difilippantonio,Simone; Kirnbauer, Reinhard; Roden, Richard B; Pinto,Ligia; Shoemaker, Robert H; Ernst, Robert K; Marshall,Jason
  3. Vaccine. 2024, Dec 03; 126577.
  1. 25.   Adjuvants to the S1-subunit of the SARS-CoV-2 spike protein vaccine improve antibody and T cell responses and surrogate neutralization in mice
  2. Becker, William; Rebbani, Khadija; Duan, Zhijian; Valkov,Eugene; Bryant, Shawn; Ho, Mitchell; Berzofsky, Jay A; Olkhanud, Purevdorj B
  3. Scientific Reports. 2024, Nov 28; 14(1): 29609.
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