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  1. 1.   Bisubstrate inhibitors of 6-hydroxymethyl-7,8-dihydroptein pyrophosphokinase: Toward cell permeability
  2. Shi,Genbin; Shaw,Gary; Ji,Xinhua
  3. Bioorganic & Medicinal Chemistry Letters. 2024, Sep 25; 129977.
  1. 2.   Methotrexate-based PROTACs as DHFR-specific chemical probes
  2. Rana, Sandeep; Dranchak, Patricia; Dahlin, Jayme L; Lamy, Laurence; Li,Wenqing; Oliphant, Erin; Shrimp, Jonathan H; Rajacharya, Girish H; Tharakan, Ravi; Holland, David O; Whitten, Apryl S; Wilson, Kelli M; Singh, Pankaj K; Durum,Scott; Tao, Dingyin; Rai, Ganesha; Inglese, James
  3. Cell Chemical Biology. 2023, Oct 17;
  1. 3.   Structure of Helicobacter pylori dihydroneopterin aldolase suggests a fragment-based strategy for isozyme-specific inhibitor design
  2. Shaw,Gary; Fan,Lixin; Cherry,Scott; Shi,Genbin; Tropea, Joseph E; Ji,Xinhua
  3. Current Research in Structural Biology. 2023, Jan 30; 5: 100095.
  1. 4.   Tying the knot in the tetrahydrofolate (THF) riboswitch: A molecular basis for gene regulation
  2. Wilt,Haley; Yu,Ping; Tan, Kemin; Wang, Yun-Xing; Stagno,Jason
  3. Journal of Structural Biology. 2021, Mar; 213(1):
  1. 5.   Bisubstrate inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: Transition state analogs for high affinity binding
  2. Shi,Genbin; Shaw,Gary; Zhu, Fengxia; Tarasov,Sergey; Ji,Xinhua
  3. Bioorganic & Medicinal Chemistry. 2021, Jan 1; 29: 115847.
  1. 6.   Conventional and Chemically Programmed Asymmetric Bispecific Antibodies Targeting Folate Receptor 1
  2. Qi, Junpeng; Hymel, David; Nelson, Christopher G.; Burke,Terrence; Rade, Christoph
  3. Frontiers in immunology. 2019, Aug 21; 10
  1. 7.   Depletion of activated macrophages with a folate receptor-beta-specific antibody improves symptoms in mouse models of rheumatoid arthritis
  2. Hu, Yingwen; Wang, Bingbing; Shen, Jiayin; Low, Stewart A; Putt, Karson S; Niessen, Hans W M; Matteson, Eric L; Murphy, Linda; Ruppert, Clemens; Jansen, Gerrit; Oliver, Stephen J; Feng,Yang; Dimitrov, Dimiter S; Nickerson-Nutter, Cheryl; Low, Philip S
  3. Arthritis research & therapy. 2019, Jun 07; 21(1): 143.
  1. 8.   Bisubstrate analogue inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: New design with improved properties
  2. Shi, G. B.; Shaw, G.; Liang, Y. H.; Subburaman, P.; Li, Y.; Wu, Y.; Yan, H. G.; Ji, X. H.
  3. Bioorganic & Medicinal Chemistry. 2012, Jan; 20(1): 47-57.
  1. 9.   Crystal Structures of Cobalamin-Independent Methionine Synthase (MetE) from Streptococcus mutans: A Dynamic Zinc-Inversion Model
  2. Fu, T. M.; Almqvist, J.; Liang, Y. H.; Li, L. F.; Huang, Y. F.; Su, X. D.
  3. Journal of Molecular Biology. 2011, Sep; 412(4): 688-697.
  1. 10.   Dynamic Allostery: Linkers Are Not Merely Flexible
  2. Ma, B. Y.; Tsai, C. J.; Haliloglu, T.; Nussinov, R.
  3. Structure. 2011, Jul; 19(7): 907-917.
  1. 11.   Plasma and CNS pharmacokinetics of O(4)-benzylfolic acid (O(4)BF) and metabolite in a non-human primate model
  2. Chuk, M. K.; Cole, D. E.; McCully, C.; Loktionova, N. A.; Pegg, A. E.; Parker, R. J.; Pauly, G.; Widemann, B. C.; Balis, F. M.; Fox, E.
  3. Cancer Chemotherapy and Pharmacology. 2011, Jun; 67(6): 1291-1297.
  1. 12.   A folate receptor beta-specific human monoclonal antibody recognizes activated macrophage of rheumatoid patients and mediates antibody-dependent cell-mediated cytotoxicity
  2. Feng, Y.; Shen, J. Y.; Streaker, E. D.; Lockwood, M.; Zhu, Z. Y.; Low, P. S.; Dimitrov, D. S.
  3. Arthritis Research & Therapy. 2011, Apr 8; 13(2): 12.
  1. 13.   Supramolecular complexes of quantum dots and a polyamidoamine (PAMAM)-folate derivative for molecular imaging of cancer cells
  2. Geraldo, D. A.; Duran-Lara, E. F.; Aguayo, D.; Cachau, R. E.; Tapia, J.; Esparza, R.; Yacaman, M. J.; Gonzalez-Nilo, F. D.; Santos, L. S.
  3. Analytical and Bioanalytical Chemistry. 2011, Apr; 400(2): 483-492.
  1. 14.   Role of Protein Conformational Dynamics in the Catalysis by 6-Hydroxymethyl-7, 8-Dihydropterin Pyrophosphokinase
  2. Yan, H. G.; Ji, X. H.
  3. Protein and Peptide Letters. 2011, Apr; 18(4): 328-335.
  1. 15.   Characterization of the Meiosis-Specific Recombinase Dmc1 of Pneumocystis
  2. Kutty, G.; Achaz, G.; Maldarelli, F.; Varma, A.; Shroff, R.; Becker, S.; Fantoni, G.; Kovacs, J. A.
  3. Journal of Infectious Diseases. 2010, Dec; 202(12): 1920-1929.
  1. 16.   Enzyme dynamics point to stepwise conformational selection in catalysis
  2. Ma, B. Y.; Nussinov, R.
  3. Current Opinion in Chemical Biology. 2010, Oct; 14(5): 652-659.
  1. 17.   In vitro comparison of O4-benzylfolate modulated, BCNU-induced toxicity in human bone marrow using CFU-GM and tumor cell lines
  2. Behrsing, H. P.; Furniss, M. J.; Robillard, K. A.; Tomaszewski, J. E.; Parchment, R. E.
  3. Cancer Chemotherapy and Pharmacology. 2010, May; 65(6): 1083-1091.
  1. 18.   The role of dynamic conformational ensembles in biomolecular recognition
  2. Boehr, D. D.; Nussinov, R.; Wright, P. E.
  3. Nature Chemical Biology. 2009 5(11): 789-796.
  1. 19.   MTHFR genotype and colorectal adenoma recurrence: Data from a double-blind placebo-controlled clinical trial
  2. Levine, A. J.; Wallace, K.; Tsang, S.; Haile, R. W.; Saibil, F.; Ahnen, D.; Cole, B. F.; Barry, E. L.; Munroe, D. J.; Ali, I. U.; Uel, P.; Baron, J. A.
  3. Cancer Epidemiology Biomarkers & Prevention. 2008 17(9): 2409-2415.
  1. 20.   One-carbon metabolism gene polymorphisms and risk of non-Hodgkin lymphoma in Australia
  2. Lee, K. M.; Lan, Q.; Kricker, A.; Purdue, M. P.; Grulich, A. E.; Vajdic, C. M.; Turner, J.; Whitby, D.; Kang, D.; Chanock, S.; Rothman, N.; Armstrong, B. K.
  3. Human Genetics. 2007, Dec; 122(5): 525-533.
  1. 21.   Ligand binding and circular permutation modify residue interaction network in DHFR
  2. Hu, Z. J.; Bowen, D.; Southerl, W. M.; del Sol, A.; Pan, Y. P.; Nussinov, R.; Ma, B. Y.
  3. Plos Computational Biology. 2007, Jun; 3(6): 1097-1107.
  1. 22.   Molecular dynamics simulation of E-coli dihydrofolate reductase and its circular permuted variants: Relative stabilities in experiment and simulations
  2. Hu, Z. J.; Ma, B. Y.; Nussinov, R.; Southerl, W. M.
  3. Abstracts of Papers of the American Chemical Society. 2004, AUG 22; 228(Part 1): 123-COMP, Abstract U519-123-COMP, Abstract U519.
  1. 23.   Reaction trajectory of pyrophosphoryl transfer catalyzed by 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase
  2. Blaszczyk, J.; Shi, G. B.; Li, Y.; Yan, H. G.; Ji, X. H.
  3. Structure. 2004 12(3): 467-475.
  1. 24.   Glycine N-methyltransferase tumor susceptibility gene in the benzo(a)pyrene-detoxification pathway
  2. Chen, S. Y.; Lin, J. R. V.; Darbha, R.; Lin, P. P.; Liu, T. Y.; Chen, Y. M. A.
  3. Cancer Research. 2004 64(10): 3617-3623.
  1. 25.   Modulating functional loop movements: The role of highly conserved residues in the correlated loop motions
  2. Gunasekaran, K.; Nussinov, R.
  3. Chembiochem. 2004 5(2): 224-230.
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