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  1. 1.   Prediction of differential Gag versus Env responses to a mosaic HIV-1 vaccine regimen by HLA class I alleles
  2. Nelson,George; van Duijn, Janine; Yuki,Yuko; Pau, Maria G; Tomaka, Frank; Lavreys, Ludo; DeRosa, Steven C; McElrath, M Juliana; Kirk, Gregory D; Michael, Nelson L; Haas, David W; Deeks, Steven G; Wolinsky, Steven; Walker, Bruce; Barouch, Dan H; Stieh, Daniel; Carrington, Mary
  3. Journal of Virology. 2024, Jul 24; e0028124.
  1. 2.   Polymorphic residues in HLA-B that mediate HIV control distinctly modulate peptide interactions with both TCR and KIR molecules
  2. Tano-Menka, Rhoda; Singh, Nishant K; Muzhingi, Itai; Li, Xiaolong; Mandanas, Michael V; Kaseke, Clarety; Crain, Charles R; Zhang, Angela; Ogunshola, Funsho J; Vecchiarello, Liza; Piechocka-Trocha, Alicja; Bashirova,Arman; Birnbaum, Michael E; Carrington,Mary; Walker, Bruce D; Gaiha, Gaurav D
  3. Structure (London, England : 1993). 2024, May 07;
  1. 3.   NKp44/HLA-DP-dependent regulation of CD8 effector T cells by NK cells
  2. Padoan, Benedetta; Casar, Christian; Krause, Jenny; Schultheiss, Christoph; Baumdick, Martin E; Niehrs, Annika; Zecher, Britta F; Pujantell, Maria; Yuki,Yuko; Martin,Pat; Remmerswaal, Ester B M; Dekker, Tamara; van der Bom-Baylon, Nelly D; Noble, Janelle A; Carrington,Mary; Bemelman, Frederike J; van Lier, Rene A W; Binder, Mascha; Gagliani, Nicola; Bunders, Madeleine J; Altfeld, Marcus
  3. Cell Reports. 2024, Apr 12; 43(4): 114089.
  1. 4.   Epstein-Barr virus gp42 antibodies reveal sites of vulnerability for receptor binding and fusion to B cells
  2. Bu, Wei; Kumar, Ashish; Board, Nathan L; Kim, JungHyun; Dowdell, Kennichi; Zhang, Shu; Lei, Yona; Hostal, Anna; Krogmann, Tammy; Wang,Yanmei; Pittaluga, Stefania; Marcotrigiano, Joseph; Cohen, Jeffrey I
  3. Immunity. 2024, Mar 12; 57(3): 559-573.e6.
  1. 5.   Divergent HLA variations and heterogeneous expression but recurrent HLA loss-of- heterozygosity and common HLA-B and TAP transcriptional silencing across advanced pediatric solid cancers
  2. Lim, Wan Ching; Marques Da Costa, Maria Eugenia; Godefroy, Karine; Jacquet, Eric; Gragert, Loren; Rondof, Windy; Marchais, Antonin; Nhiri, Naima; Dalfovo, Davide; Viard,Mathias; Labaied, Nizar; Khan, Asif M; Dessen, Philippe; Romanel, Alessandro; Pasqualini, Claudia; Schleiermacher, Gudrun; Carrington,Mary; Zitvogel, Laurence; Scoazec, Jean-Yves; Geoerger, Birgit; Salmon, Jerome
  3. Frontiers in Immunology. 2024, Jan 22; 14: 1265469.
  1. 6.   HLA-DP on Epithelial Cells enables Tissue Damage by NKp44+ NK Cells in Ulcerative Colitis
  2. Baumdick, Martin E; Niehrs, Annika; Degenhardt, Frauke; Schwerk, Maria; Hinrichs, Ole; Jordan-Paiz, Ana; Padoan, Benedetta; Wegner, Lucy H M; Schloer, Sebastian; Zecher, Britta F; Malsy, Jakob; Joshi, Vinita R; Illig, Christin; Schröder-Schwarz, Jennifer; Möller, Kimberly J; Martin,Pat; Yuki,Yuko; Ozawa, Mikki; Sauter, Jürgen; Schmidt, Alexander H; Perez, Daniel; Giannou, Anastasios D; Carrington, Mary; Davis, Randall S; Schumacher, Udo; Sauter, Guido; Huber, Samuel; Puelles, Victor G; Melling, Nathaniel; Franke, Andre; Altfeld, Marcus; Bunders, Madeleine J
  3. Gastroenterology. 2023, Oct; 165(4): 946-962.e13..
  1. 7.   Comparison between qPCR and RNA-seq reveals challenges of quantifying HLA expression
  2. Aguiar, Vitor R C; Castelli, Erick C; Single, Richard M; Bashirova,Arman; Ramsuran,Veron; Kulkarni, Smita; Augusto, Danillo G; Martin,Pat; Gutierrez-Arcelus, Maria; Carrington, Mary; Meyer, Diogo
  3. Immunogenetics. 2023, Jan 28;
  1. 8.   NKG2A and HLA-E define an alternative immune checkpoint axis in bladder cancer
  2. Salomé, Bérengère; Sfakianos, John P; Ranti, Daniel; Daza, Jorge; Bieber, Christine; Charap, Andrew; Hammer, Christian; Banchereau, Romain; Farkas, Adam M; Ruan, Dan Fu; Izadmehr, Sudeh; Geanon, Daniel; Kelly, Geoffrey; de Real, Ronaldo M; Lee, Brian; Beaumont, Kristin G; Shroff, Sanjana; Wang, Yuanshuo A; Wang, Ying-Chih; Thin, Tin Htwe; Garcia-Barros, Monica; Hegewisch-Solloa, Everardo; Mace, Emily M; Wang, Li; O'Donnell, Timothy; Chowell, Diego; Fernandez-Rodriguez, Ruben; Skobe, Mihaela; Taylor, Nicole; Kim-Schulze, Seunghee; Sebra, Robert P; Palmer, Doug; Clancy-Thompson, Eleanor; Hammond, Scott; Kamphorst, Alice O; Malmberg, Karl-Johan; Marcenaro, Emanuela; Romero, Pedro; Brody, Rachel; Viard,Mathias; Yuki,Yuko; Martin,Pat; Carrington,Mary; Mehrazin, Reza; Wiklund, Peter; Mellman, Ira; Mariathasan, Sanjeev; Zhu, Jun; Galsky, Matthew D; Bhardwaj, Nina; Horowitz, Amir
  3. Cancer Cell. 2022, Sep 12; 40(9): 1027-1043.e9.
  1. 9.   Genetic variation that determines TAPBP expression levels associates with the course of malaria in an HLA allotype-dependent manner
  2. Walker-Sperling, Victoria; Digitale, Jean C; Viard,Mathias; Martin,Pat; Bashirova,Arman; Yuki,Yuko; Ramsuran, Veron; Kulkarni, Smita; Naranbhai, Vivek; Li,Hongchuan; Anderson,Steve; Yum, Lauren; Clifford, Robert; Kibuuka, Hannah; Ake, Julie; Thomas, Rasmi; Rowland-Jones, Sarah; Rek, John; Arinaitwe, Emmanuel; Kamya, Moses; Rodriguez-Barraquer, Isabel; Feeney, Margaret E; Carrington,Mary
  3. Proceedings of the National Academy of Sciences of the United States of America. 2022, Jul 19; 119(29): e2205498119.
  1. 10.   T cell reactivity to the SARS-CoV-2 Omicron variant is preserved in most but not all individuals
  2. Naranbhai, Vivek; Nathan, Anusha; Kaseke, Clarety; Berrios, Cristhian; Khatri, Ashok; Choi, Shawn; Getz, Matthew A; Tano-Menka, Rhoda; Ofoman, Onosereme; Gayton, Alton; Senjobe, Fernando; Zhao, Zezhou; St Denis, Kerri J; Lam, Evan C; Carrington,Mary; Garcia-Beltran, Wilfredo F; Balazs, Alejandro B; Walker, Bruce D; Iafrate, A John; Gaiha, Gaurav D
  3. Cell. 2022, Feb 03; 185
  1. 11.   Trans-ancestral fine-mapping of MHC reveals key amino acids associated with spontaneous clearance of hepatitis C in HLA-DQß1
  2. Valencia, Ana; Vergara, Candelaria; Thio, Chloe L; Vince, Nicolas; Douillard, Venceslas; Grifoni, Alba; Cox, Andrea L; Johnson, Eric O; Kral, Alex H; Goedert, James J; Mangia, Alessandra; Piazzolla, Valeria; Mehta, Shruti H; Kirk, Gregory D; Kim, Arthur Y; Lauer, Georg M; Chung, Raymond T; Price, Jennifer C; Khakoo, Salim I; Alric, Laurent; Cramp, Matthew E; Donfield, Sharyne M; Edlin, Brian R; Busch, Michael P; Alexander, Graeme; Rosen, Hugo R; Murphy, Edward L; Wojcik, Genevieve L; Carrington,Mary; Gourraud, Pierre-Antoine; Sette, Alessandro; Thomas, David L; Duggal, Priya
  3. American journal of human genetics. 2022, Jan 25; 109(2): 299-310.
  1. 12.   HLA class-I-peptide stability mediates CD8+ T cell immunodominance hierarchies and facilitates HLA-associated immune control of HIV
  2. Kaseke, Clarety; Park, Ryan J; Singh, Nishant K; Koundakjian, Dylan; Bashirova,Arman; Garcia Beltran, Wilfredo F; Takou Mbah, Overbeck C; Ma, Jiaqi; Senjobe, Fernando; Urbach, Jonathan M; Nathan, Anusha; Rossin, Elizabeth J; Tano-Menka, Rhoda; Khatri, Ashok; Piechocka-Trocha, Alicja; Waring, Michael T; Birnbaum, Michael E; Baker, Brian M; Carrington,Mary; Walker, Bruce D; Gaiha, Gaurav D
  3. Cell reports. 2021, Jul 13; 36(2): 109378.
  1. 13.   Inhibitory KIR ligands are associated with higher P. falciparum parasite prevalence
  2. Digitale, Jean C; Callaway, Perri C; Martin, Maureen; Nelson,George; Viard,Mathias; Rek, John; Arinaitwe, Emmanuel; Dorsey, Grant; Kamya, Moses; Carrington,Mary; Rodriguez-Barraquer, Isabel; Feeney, Margaret E
  3. The Journal of infectious diseases. 2021, Jul 1; 224(1): 175-183.
  1. 14.   Adaptive Admixture of HLA Class I Allotypes Enhanced Genetically Determined Strength of Natural Killer Cells in East Asians
  2. Deng, Zhihui; Zhen, Jianxin; Harrison, Genelle F.; Zhang, Guobin; Chen, Rui; Sun, Ge; Yu, Qiong; Nemat-Gorgani, Neda; Guethlein, Lisbeth A.; He, Liumei; Tang, Mingzhong; Gao, Xiaojiang; Cai, Siqi; Palmer, William H.; Shortt, Jonathan A.; Gignoux, Christopher R.; Carrington,Mary; Zou, Hongyan; Parham, Peter; Hong, Wenxu; Norman, Paul J.
  3. Molecular Biology and Evolution. 2021, May 19; 38(6): 2582-2596.
  1. 15.   HLA Alleles B*53:01 and C*06:02 Are Associated With Higher Risk of P. falciparum Parasitemia in a Cohort in Uganda
  2. Digitale, Jean C.; Callaway, Perri C.; Martin,Pat; Nelson,George; Viard,Mathias; Rek, John; Arinaitwe, Emmanuel; Dorsey, Grant; Kamya, Moses; Carrington,Mary; Rodriguez-Barraquer, Isabel; Feeney, Margaret E.
  3. Frontiers In Immunology. 2021, Mar 19; 12
  1. 16.   Genome-wide Screens Identify Lineage- and Tumor-Specific Genes Modulating MHC-I- and MHC-II-Restricted Immunosurveillance of Human Lymphomas
  2. Dersh, Devin; Phelan, James D; Gumina, Megan E; Wang, Boya; Arbuckle, Jesse H; Holly, Jaroslav; Kishton, Rigel J; Markowitz,Tovah; Seedhom, Mina O; Fridlyand, Nathan; Wright, George W; Huang, Da Wei; Ceribelli, Michele; Thomas, Craig J; Lack,Justin; Restifo, Nicholas P; Kristie, Thomas M; Staudt, Louis M; Yewdell, Jonathan W
  3. Immunity. 2021, Jan 12; 54(1): 116-131.e10.
  1. 17.   HLA tapasin independence: broader peptide repertoire and HIV control
  2. Bashirova,Arman; Viard,Mathias; Naranbhai, Vivek; Grifoni, Alba; Garcia-Beltran, Wilfredo; Akdag,Marjan; Yuki,Yuko; Gao,Xiaojiang; O'hUigin, Colm; Raghavan, Malini; Wolinsky, Steven; Bream, Jay H; Duggal, Priya; Martinson, Jeremy; Michael, Nelson L; Kirk, Gregory D; Buchbinder, Susan P; Haas, David; Goedert, James J; Deeks, Steven G; Fellay, Jacques; Walker, Bruce; Goulder, Philip; Cresswell, Peter; Elliott, Tim; Sette, Alessandro; Carlson, Jonathan; Carrington,Mary
  3. Proceedings of the National Academy of Sciences of the United States of America. 2020, NOV 10; 117(45): 28232-28238.
  1. 18.   Mapping Single Walled Carbon Nanotubes in Photosynthetic Algae by Single-Cell Confocal Raman Microscopy
  2. Orlanducci, Silvia; Fulgenzi,Gianluca; Margonelli, Andrea; Rea, Giuseppina; Antal, Taras K; Lambreva, Maya D
  3. Materials (Basel, Switzerland). 2020, NOV; 13(22): pii: E5121.
  1. 19.   Tuning of human NK cells by endogenous HLA-C expression
  2. Goodson-Gregg,Joseph; Krepel,Stacey; Anderson,Steve
  3. Immunogenetics. 2020, Mar 26;
  1. 20.   Genome-wide Association Study Identifies HLA-DPB1 as a Significant Risk Factor for Severe Aplastic Anemia
  2. Savage, Sharon A; Viard,Mathias; Ohuigin,Colm; Zhou,Weiyin; Yeager,Meredith; Li, Shengchao Alfred; Wang, Tao; Ramsuran, Veron; Vince, Nicolas; Vogt,Aurelie; Hicks,Belynda; Burdett,Laurie; Chung,Charles; Dean, Michael; de Andrade, Kelvin C; Freedman, Neal D; Berndt, Sonja I; Rothman, Nathaniel; Lan, Qing; Cerhan, James R; Slager, Susan L; Zhang, Yawei; Teras, Lauren R; Haagenson, Michael; Chanock, Stephen J; Spellman, Stephen R; Wang, Youjin; Willis, Amanda; Askar, Medhat; Lee, Stephanie J; Carrington,Mary; Gadalla, Shahinaz M
  3. American journal of human genetics. 2020, Feb 6; 106(2): 264-271.
  1. 21.   Sensitivity of mesothelioma cells to PARP inhibitors is not dependent on BAP1 but is enhanced by temozolomide in cells with high-Schlafen 11and low-MGMT expression
  2. Rathkey, Daniel; Khanal, Manakamana; Murai, Junko; Zhang, Jingli; Sengupta, Manjistha; Jiang, Qun; Morrow, Betsy; Evans,Christine; Chari,Raj; Fetsch, Patricia; Chung, Hye-Jung; Xi, Liqiang; Roth, Mark; Filie, Armando; Raffeld, Mark; Thomas, Anish; Pommier, Yves; Hassan, Raffit
  3. Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer. 2020, Jan 28; pii: S1556-0864(20)30035-6.
  1. 22.   Tuning of NK-Specific HLA-C Expression by Alternative mRNA Splicing
  2. Goodson-Gregg,Joseph; Rothbard,Brian; Zhang, Amy; Wright,Paul; Li,Hongchuan; Walker-Sperling,Victoria; Carrington,Mary; Anderson,Steve
  3. Frontiers in immunology. 2020, JAN 10; 10: 3034.
  1. 23.   Single nucleotide polymorphisms in HLA alleles are associated with HIV-1 viral load in demographically diverse, ART-naïve participants from the START trial
  2. Ekenberg, Christina; Tang, Man-Hung Eric; Zucco, Adrian G; Murray, Daniel D; MacPherson, Cameron Ross; Hu,Xiaojun; Sherman,Brad; Losso, Marcelo H; Wood, Robin; Paredes, Roger; Molina, Jean-Michel; Helleberg, Marie; Jina, Nureen; Kityo, Cissy M; Florence, Eric; Polizzotto, Mark N; Neaton, James D; Lane, H Clifford; Lundgren, Jens D
  3. The Journal of infectious diseases. 2019, OCT 15; 220(8): 1325-1334.
  1. 24.   Memory CD4+T-Cells Expressing HLA-DR Contribute to HIV Persistence During Prolonged Antiretroviral Therapy
  2. Lee, Eunok; Bacchetti, Peter; Milush, Jeffery; Shao,Wei; Boritz, Eli; Douek, Daniel; Fromentin, Remi; Liegler, Teri; Hoh, Rebecca; Deeks, Steve G.; Hecht, Frederick M.; Chomont, Nicolas; Palmer, Sarah
  3. FRONTIERS IN MICROBIOLOGY. 2019, SEP 26; 10: 2214.
  1. 25.   Natural Killer Cells Offer Differential Protection From Leukemia in Chinese Southern Han
  2. Deng, Zhihui; Zhao, Jun; Cai, Siqi; Qi, Ying; Yu, Qiong; Martin, Maureen P.; Gao,Xiaojiang; Chen, Rui; Zhuo, Jiacai; Zhen, Jianxin; Zhang, Mingjie; Zhang, Guobin; He, Liumei; Zou, Hongyan; Lu, Liang; Zhu, Weigang; Hong, Wenxu; Carrington,Mary; Norman, Paul J.
  3. FRONTIERS IN IMMUNOLOGY. 2019, JUL 16; 10: 1646.
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