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  1. 1.   Use of human peripheral blood mononuclear cells to define immunological properties of nucleic acid nanoparticles
  2. Dobrovolskaia,Marina; Afonin, Kirill A
  3. Nature protocols. 2020, Oct 23; 15(11): 3678-3698.
  1. 2.   Nanostructured Lipid Carriers as Potential Drug Delivery Systems for Skin disorders
  2. Waghule, Tejashree; Rapalli, Vamshi Krishna; Gorantla, Srividya; Saha, Ranendra Narayan; Dubey, Sunil Kumar; Puri,Anu; Singhvi, Gautam
  3. Current pharmaceutical design. 2020, Jun 14; 26(36): 4569-4579.
  1. 3.   Fluorous Phase-Directed Peptide Assembly Affords Nano-Peptisomes Capable of Ultrasound-Triggered Cellular Delivery
  2. Medina, Scott H; Michie, Megan S; Miller, Stephen; Schnermann, Martin; Schneider, Joel
  3. Angewandte Chemie (International ed. in English). 2017, Sep 11; 56(38): 11404-11408.
  1. 4.   A Protocol for the Design of Protein and Peptide Nanostructure Self-Assemblies Exploiting Synthetic Amino Acids.
  2. Haspel, Nurit; Zheng, Jie; Aleman, Carlos; Zanuy, David; Nussinov, Ruth
  3. Methods in molecular biology (Clifton, N.J.). 2017 1529: 323-352.
  1. 5.   Design and self-assembly of siRNA-functionalized RNA nanoparticles for use in automated nanomedicine
  2. Afonin, K. A.; Grabow, W. W.; Walker, F. M.; Bindewald, E.; Dobrovolskaia, M. A.; Shapiro, B. A.; Jaeger, L.
  3. Nature Protocols. 2011, Dec; 6(12): 2022-2034.
  1. 6.   Use of RNA structure flexibility data in nanostructure modeling
  2. Kasprzak, W.; Bindewald, E.; Kim, T. J.; Jaeger, L.; Shapiro, B. A.
  3. Methods. 2011, Jun; 54(2): 239-250.
  1. 7.   Materials from peptide assembly: towards the treatment of cancer and transmittable disease
  2. Branco, M. C.; Sigano, D. M.; Schneider, J. P.
  3. Current Opinion in Chemical Biology. 2011, Jun; 15(3): 427-434.
  1. 8.   Symmetry-Based Self-assembled Nanotubes Constructed Using Native Protein Structures: The Key Role of Flexible Linkers
  2. Buch, I.; Tsai, C. J.; Wolfson, H. J.; Nussinov, R.
  3. Protein and Peptide Letters. 2011, Apr; 18(4): 362-372.
  1. 9.   Self-Assembling RNA Nanorings Based on RNAI/II Inverse Kissing Complexes
  2. Grabow, W. W.; Zakrevsky, P.; Afonin, K. A.; Chworos, A.; Shapiro, B. A.; Jaeger, L.
  3. Nano Letters. 2011, Feb; 11(2): 878-887.
  1. 10.   In vitro assembly of cubic RNA-based scaffolds designed in silico
  2. Afonin, K. A.; Bindewald, E.; Yaghoubian, A. J.; Voss, N.; Jacovetty, E.; Shapiro, B. A.; Jaeger, L.
  3. Nature Nanotechnology. 2010, Sep; 5(9): 676-682.
  1. 11.   Lipid-Based Nanoparticles as Pharmaceutical Drug Carriers: From Concepts to Clinic
  2. Puri, A.; Loomis, K.; Smith, B.; Lee, J. H.; Yavlovich, A.; Heldman, E.; Blumenthal, R.
  3. Critical Reviews in Therapeutic Drug Carrier Systems. 2009 26(6): 523-580.
  1. 12.   Computational Validation of Protein Nanotubes
  2. Buch, I.; Brooks, B. R.; Wolfson, H. J.; Nussinov, R.
  3. Nano Letters. 2009 9(3): 1096-1102.
  1. 13.   Lipid-Modulated Pharmacophore Nanorods Assembled at the Air/Water Interface
  2. Philosof-Mazor, L.; Volinsky, R.; Jopp, J.; Blumberg, P.; Rapaport, H.; Marquez, V. E.; Jelinek, R.
  3. Chemphyschem. 2009 10(15): 2615-2619.
  1. 14.   Mutational Analysis and Allosteric Effects in the HIV-1 Capsid Protein Carboxyl-Terminal Dimerization Domain
  2. Yu, X.; Wang, Q. M.; Yang, J. C.; Buch, I.; Tsai, C. J.; Ma, B. Y.; Cheng, S.; Nussinov, R.; Zheng, J.
  3. Biomacromolecules. 2009 10(2): 390-399.
  1. 15.   Protein Segments with Conformationally Restricted Amino Acids Can Control Supramolecular Organization at the Nanoscale
  2. Zanuy, D.; Ballano, G.; Jimenez, A. I.; Casanovas, J.; Haspel, N.; Cativiela, C.; Curco, D.; Nussinov, R.; Aleman, C.
  3. Journal of Chemical Information and Modeling. 2009 49(7): 1623-1629.
  1. 16.   Structural Analysis of a beta-Helical Protein Motif Stabilized by Targeted Replacements with Conformationally Constrained Amino Acids
  2. Ballano, G.; Zanuy, D.; Jimenez, A. I.; Cativiela, C.; Nussinov, R.; Aleman, C.
  3. Journal of Physical Chemistry B. 2008 112(41): 13101-13115.
  1. 17.   Conformational Preferences of beta- and gamma-Aminated Proline Analogues
  2. Flores-Ortega, A.; Casanovas, J.; Nussinov, R.; Aleman, C.
  3. Journal of Physical Chemistry B. 2008 112(44): 14045-14055.
  1. 18.   The energy landscape of a selective tumor-homing pentapeptide
  2. Zanuy, D.; Flores-Ortega, A.; Casanovas, J.; Curco, D.; Nussinov, R.; Aleman, C.
  3. Journal of Physical Chemistry B. 2008 112(29): 8692-8700.
  1. 19.   Testing beta-helix terminal coils stability by targeted substitutions with non-proteogenic amino acids: A molecular dynamics study
  2. Zanuy, D.; Rodriguez-Ropero, F.; Nussinov, R.; Aleman, C.
  3. Journal of Structural Biology. 2007, Nov; 160(2): 177-189.
  1. 20.   Stability of tubular structures based on beta-helical proteins: Self-assembled versus polymerized nanoconstructs and wild-type versus mutated sequences
  2. Zanuy, D.; Rodriguez-Ropero, F.; Haspel, N.; Zheng, J.; Nussinov, R.; Aleman, C.
  3. Biomacromolecules. 2007, Oct; 8(10): 3135-3146.
  1. 21.   Computational design of an RNA hexagonal nanoring and an RNA nanotube
  2. Yingling, Y. G.; Shapiro, B. A.
  3. Nano Letters. 2007, Aug; 7(8): 2328-2334.
  1. 22.   Principles of nanostructure design with protein building blocks
  2. Tsai, C. J.; Zheng, J.; Zanuy, D.; Haspel, N.; Wolfson, H.; Aleman, C.; Nussinov, R.
  3. Proteins-Structure Function and Bioinformatics. 2007, Jul; 68(1): 1-12.
  1. 23.   Designing a nanotube using naturally occurring protein building blocks
  2. Tsai, C. J.; Zheng, J.; Nussinov, R.
  3. Plos Computational Biology. 2006, Apr; 2(4): 311-319.
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