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  1. 1.   nightshift: A Python program for plotting simulated NMR spectra from assigned chemical shifts from the Biological Magnetic Resonance Data Bank
  2. Fucci,Ian; Byrd,Robert
  3. Protein Science. 2021, Sep 13;
  1. 2.   Uncovering a membrane-distal conformation of KRAS available to recruit RAF to the plasma membrane
  2. Van,Que; López, Cesar A; Tonelli, Marco; Taylor,Troy; Niu, Ben; Stanley, Christopher B; Bhowmik, Debsindhu; Tran,Tim; Frank,Peter; Messing,Simon; Alexander,Patrick; Scott, Daniel; Ye, Xiaoying; Drew,Matt; Chertov,Oleg; Lösche, Mathias; Ramanathan, Arvind; Gross, Michael L; Hengartner, Nicolas W; Westler, William M; Markley, John L; Simanshu,Dhirendra; Nissley,Dwight; Gillette, William K; Esposito,Dom; McCormick, Frank; Gnanakaran, S; Heinrich, Frank; Stephen, Andrew G
  3. Proceedings of the National Academy of Sciences of the United States of America. 2020, SEP 29; 117(39): 24258-24268.
  1. 3.   A terminal alpha 3-galactose modification regulates an E3 ubiquitin ligase subunit in Toxoplasma gondii
  2. Mandalasi, Msano; Kim, Hyun W.; Thieker, David; Sheikh, M. Osman; Gas-Pascual, Elisabet; Rahman,Kazi; Zhao, Peng; Daniel, Nitin G.; van der Wel, Hanke; Ichikawa, H. Travis; Glushka, John N.; Wells, Lance; Woods, Robert J.; Wood, Zachary A.; West, Christopher M.
  3. JOURNAL OF BIOLOGICAL CHEMISTRY. 2020, JUL 3; 295(27): 9223-9243.
  1. 4.   Structural basis and mechanism of the unfolding-induced activation of HdeA, a bacterial acid response chaperone
  2. Yu, Xing-Chi; Hu, Yunfei; Ding, Jienv; Li, Hongwei; Jin, Changwen
  3. JOURNAL OF BIOLOGICAL CHEMISTRY. 2019, Mar 1; 294(9): 3192-3206.
  1. 5.   Peptide-MHC (pMHC) binding to a human antiviral T cell receptor induces long-range allosteric communication between pMHC- and CD3-binding sites
  2. Rangarajan, Sneha; He, Yanan; Chen, Yihong; Kerzic, Melissa C.; Ma,Buyong; Gowthaman, Ragul; Pierce, Brian G.; Nussinov,Ruth; Mariuzza, Roy A.; Orban, John
  3. JOURNAL OF BIOLOGICAL CHEMISTRY. 2018, Oct 12; 293(41): 15991-16005.
  1. 6.   Cholecystokinin Receptor-Targeted Polyplex Nanoparticle Inhibits Growth and Metastasis of Pancreatic Cancer
  2. Burks, Julian; Nadella, Sandeep; Mahmud, Abdullah; Mankongpaisarnrung, Charoen; Wang, Juan; Hahm, Jong-In; Tucker, Robin D; Shivapurkar, Narayan; Stern, Steve; Smith, Jill P
  3. Cellular and Molecular Gastroenterology and Hepatology. 2018, Mar 07; 6(1): 17-32.
  1. 7.   Conformational dynamics of the TTD-PHD histone reader module of the UHRF1 epigenetic regulator reveals multiple histone-binding states, allosteric regulation, and druggability
  2. Houliston, R Scott; Lemak, Alexander; Iqbal, Aman; Ivanochko, Danton; Duan, Shili; Kaustov, Lilia; Ong, Michelle S; Fan, Lixin; Senisterra, Guillermo; Brown, Peter J; Wang, Yun-Xing; Arrowsmith, Cheryl H
  3. Journal of Biological Chemistry. 2017, Dec 22; 292(51): 20947-20959.
  1. 8.   Flexible-Body Motions of Calmodulin and the Farnesylated Hypervariable Region Yield a High-Affinity Interaction Enabling K-Ras4B Membrane Extraction.
  2. Jang, Hyunbum; Banerjee, Avik; Chavan, Tanmay; Gaponenko, Vadim; Nussinov, Ruth
  3. The Journal of biological chemistry. 2017, Jul 28; 292(30): 12544-12559.
  1. 9.   Structure of the Taz2 domain of p300: insights into ligand binding
  2. Miller, M.; Dauter, Z.; Cherry, S.; Tropea, J. E.; Wlodawer, A.
  3. Acta crystallographica. Section D, Biological crystallography. 2009, Dec; 65(Pt 12): 1301-8.
  1. 10.   Allosteric activation of E2-RING finger-mediated ubiquitylation by a structurally defined specific E2-binding region of gp78
  2. Das, R.; Mariano, J.; Tsai, Y. C.; Kalathur, R. C.; Kostova, Z.; Li, J.; Tarasov, S. G.; McFeeters, R. L.; Altieri, A. S.; Ji, X.; Byrd, R. A.; Weissman, A. M.
  3. Molecular Cell. 2009, Jun 26; 34(6): 674-85.
  1. 11.   Cytotoxic and HIF-1alpha inhibitory compounds from Crossosoma bigelovii
  2. Klausmeyer, P.; Zhou, Q.; Scudiero, D. A.; Uranchimeg, B.; Melillo, G.; Cardellina, J. H.; Shoemaker, R. H.; Chang, C. J.; McCloud, T. G.
  3. Journal of Natural Products. 2009, May 22; 72(5): 805-12.
  1. 12.   The novel DNA methylation inhibitor zebularine is effective against the development of murine T-cell lymphoma
  2. Herranz, M.; Martin-Caballero, J.; Fraga, M. F.; Ruiz-Cabello, J.; Flores, J. M.; Desco, M.; Marquez, V.; Esteller, M.
  3. Blood. 2006, FEB 1; 107(3): 1174-1177.
  1. 13.   Engineering DNA topology with locked nucleosides: A structural study
  2. Maderia, M.; Wu, J.; Bax, A.; Shenoy, S.; O'Keefe, B.; Marquez, V. E.; Barchi, J. J.
  3. Nucleosides Nucleotides & Nucleic Acids. 2005 24(5-7, Sp. Iss.): 687-690.
  1. 14.   Characterization of a novel degradation product of 2,2 '-dithiobis
  2. Phillips, L. R.; Malspeis, L.; Tubbs, E. K.; Supko, J. G.
  3. Journal of Pharmaceutical and Biomedical Analysis. 2000 23(2-3): 395-402.
  1. 15.   Sequential Assignments and Secondary Structure of the Rna-Binding Transcriptional Regulator Nusb
  2. Altieri, A. S.; Mazzulla, M. J.; Zhou, H. J.; Costantino, N.; Court, D. L.; Byrd, R. A.
  3. Febs Letters. 1997 415(2): 221-226.
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