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  1. 1.   A Bifunctional Phosphoglucomutase/Phosphomannomutase from Thermococcus kodakarensis: Biophysical Analysis and Cryo-EM Structure
  2. Naz, Zahra; Rathore, Ishan; Saleem, Muhammad; Rahman, Moazur; Wlodawer,Alexander; Rashid, Naeem
  3. Biomolecules. 2025, Feb 21; 15(3):
  1. 2.   Use of mobile phones to collect data on COVID-19: phone access and participation rates, in Rakai, Uganda
  2. Ssekubugu, Robert; Ndyanabo, Anthony; Makumbi, Fredrick; Ekström, Anna Mia; Beres, Laura; Nalwoga Kigozi, Grace; Nakawooya, Hadijja; Ssekasanvu, Joseph; Wawer, Maria J; Nalugoda, Fred; Sewankambo, Nelson; Ssempijja,Victor; Nantume, Betty; Serwadda, David; Kigozi, Godfrey; Gray, Ronald H; Chang, Larry W; Grabowski, M Kate; Nordenstedt, Helena; Kagaayi, Joseph
  3. Global Health Action. 2024, Dec 31; 17(1): 2419160.
  1. 3.   Fine-tuning probes for fluorescence polarization binding assays of bivalent ligands against polo-like kinase 1 using full-length protein
  2. Tsuji, Kohei; Tamamura, Hirokazu; Burke,Terrence
  3. Bioorganic & Medicinal Chemistry . 2024, Dec 28; 119: 118055.
  1. 4.   Potent and broad HIV-1 neutralization in fusion peptide-primed SHIV-infected macaques
  2. Wang, Hua; Cheng, Cheng; Dal Santo, James L; Shen, Chen-Hsiang; Bylund, Tatsiana; Henry, Amy R; Howe, Colin A; Hwang, Juyun; Morano, Nicholas C; Morris, Daniel J; Pletnev, Sergei; Roark, Ryan S; Zhou, Tongqing; Hansen, Bryan T; Hoyt, Forrest H; Johnston, Timothy S; Wang, Shuyi; Zhang, Baoshan; Ambrozak, David R; Becker, Jordan E; Bender, Michael F; Changela, Anita; Chaudhary, Ridhi; Corcoran, Martin; Corrigan, Angela R; Foulds, Kathryn E; Guo, Yicheng; Lee, Myungjin; Li, Yingying; Lin, Bob C; Liu, Tracy; Louder, Mark K; Mandolesi, Marco; Mason, Rosemarie D; McKee, Krisha; Nair, Vinod; O'Dell, Sijy; Olia, Adam S; Ou, Li; Pegu, Amarendra; Raju, Nagarajan; Rawi, Reda; Roberts-Torres, Jesmine; Sarfo, Edward K; Sastry, Mallika; Schaub, Andrew J; Schmidt, Stephen D; Schramm, Chaim A; Schwartz, Cindi L; Smith, Sarah C; Stephens,Tyler; Stuckey, Jonathan; Teng, I-Ting; Todd, John-Paul; Tsybovsky,Yaroslav; Van Wazer, David J; Wang, Shuishu; Doria-Rose, Nicole A; Fischer, Elizabeth R; Georgiev, Ivelin S; Karlsson Hedestam, Gunilla B; Sheng, Zizhang; Woodward, Ruth A; Douek, Daniel C; Koup, Richard A; Pierson, Theodore C; Shapiro, Lawrence; Shaw, George M; Mascola, John R; Kwong, Peter D
  3. Cell. 2024, Oct 23;
  1. 5.   Human Cripto-1 and Cripto-3 Protein Expression in Normal and Malignant Settings That Conflicts with Established Conventions
  2. Cuttitta,Frank; García-Sanmartín, Josune; Feng,Yang; Sunday, Mary Elizabeth; Kim, Young S; Martínez, Alfredo
  3. Cancers. 2024, Oct 23; 16(21):
  1. 6.   Nano-mupirocin as tumor-targeted antibiotic: Physicochemical, immunotoxicological and pharmacokinetic characterization, and effect on gut microbiome
  2. Cern, Ahuva; Skoczen,Sarah; Snapp, Kelsie S; Hod, Atara; Zilbersheid, Daniel; Bavli, Yaelle; Alon-Maimon, Tamar; Bachrach, Gilad; Wei, Xiaohui; Berman, Bella; Yassour, Moran; Cedrone,Edward; Neun,Barry; Dobrovolskaia,Marina; Clogston,Jeffrey; Stern,Steve; Barenholz, Yechezkel
  3. Journal of Controlled Release : official journal of the Controlled Release Society. 2024, Aug 2; 373: 713-726.
  1. 7.   Producing recombinant proteins in Vibrio natriegens
  2. Smith,Matthew; Hernández, José Sánchez; Messing,Simon; Ramakrishnan,Nitya; Higgins,Brianna; Mehalko,Jennifer; Perkins,Shelley; Wall,Vanessa; Grose,Carissa; Frank,Peter; Cregger, Julia; Le,Vi; Johnson,Adam; Sherekar, Mukul; Pagonis,Morgan; Drew,Matt; Hong,Min; Widmeyer, Stephanie R T; Denson,John-Paul; Snead,Kelly; Poon,Ivy; Waybright,Tim; Champagne, Allison; Esposito,Dom; Jones,Jane; Taylor,Troy; Gillette,Bill
  3. Microbial Cell Factories. 2024, Jul 24; 23(1): 208.
  1. 8.   Design of soluble HIV-1 envelope trimers free of covalent gp120-gp41 bonds with prevalent native-like conformation
  2. Zhang, Peng; Gorman, Jason; Tsybovsky,Yaroslav; Lu, Maolin; Liu, Qingbo; Gopan, Vinay; Singh, Mamta; Lin, Yin; Miao, Huiyi; Seo, Yuna; Kwon, Alice; Olia, Adam S; Chuang, Gwo-Yu; Geng, Hui; Lai, Yen-Ting; Zhou, Tongqing; Mascola, John R; Mothes, Walther; Kwong, Peter D; Lusso, Paolo
  3. Cell Reports. 2024, Jul 18; 43(8): 114518.
  1. 9.   Protective human monoclonal antibodies target conserved sites of vulnerability on the underside of influenza virus neuraminidase
  2. Lederhofer, Julia; Tsybovsky,Yaroslav; Nguyen, Lam; Raab, Julie E; Creanga, Adrian; Stephens,Tyler; Gillespie, Rebecca A; Syeda, Hubza Z; Fisher, Brian E; Skertic, Michelle; Yap, Christina; Schaub, Andrew J; Rawi, Reda; Kwong, Peter D; Graham, Barney S; McDermott, Adrian B; Andrews, Sarah F; King, Neil P; Kanekiyo, Masaru
  3. Immunity. 2024, Mar 12; 57(3): 574-586.e7.
  1. 10.   Lessons learned: establishing a CLIA-equivalent laboratory for targeted mass spectrometry assays - navigating the transition from research to clinical practice
  2. Han, Chia-Li; Lai, Chi-Ting; Reyes, Aaron James; Yang, Hao-Chin; Lu, Jin-Ying; Shih, Shyang-Rong; Chen, Kuen-Yuan; Hoofnagle, Andrew N; Yu, Sung-Liang; Bocik, William; Hiltke, Tara; Chiu, Huan-Chi; Wan, Ching-Yi; Rodriguez, Henry; Zhang, Victoria; Chen, Yu-Ju
  3. Clinical Proteomics. 2024, Feb 22; 21(1): 12.
  1. 11.   MoCoLo: a testing framework for motif co-localization
  2. Xu, Qi; Del Mundo, Imee M A; Zewail-Foote, Maha; Luke,Brian; Vasquez, Karen M; Kowalski, Jeanne
  3. Briefings in Bioinformatics. 2024, Jan 22; 25(2):
  1. 12.   Antigen spacing on protein nanoparticles influences antibody responses to vaccination
  2. Ellis, Daniel; Dosey, Annie; Boyoglu-Barnum, Seyhan; Park, Young-Jun; Gillespie, Rebecca; Syeda, Hubza; Hutchinson, Geoffrey B; Tsybovsky,Yaroslav; Murphy, Michael; Pettie, Deleah; Matheson, Nick; Chan, Sidney; Ueda, George; Fallas, Jorge A; Carter, Lauren; Graham, Barney S; Veesler, David; Kanekiyo, Masaru; King, Neil P
  3. Cell Reports. 2023, Dec 13; 42(12): 113552.
  1. 13.   Tools and tactics to define specificity of metabolic chemical reporters
  2. Mukherjee, Mana Mohan; Bond, Michelle R; Abramowitz, Lara K; Biesbrock, Devin; Woodroofe, Carolyn C; Kim, Eun Ju; Swenson, Rolf E; Hanover, John A
  3. Frontiers in Molecular Biosciences. 2023, Dec 7; 10: 1286690.
  1. 14.   Selenium Ameliorates Acetaminophen-Induced Oxidative Stress via MAPK and Nrf2 Pathways in Mice
  2. Indumathi, Mylanayakanahosahalli Chandrashekar; Swetha, Kamatam; Kandahalli Venkataranga Nayaka,Abhilasha; Siddappa, Shiva; Kumar, Shivamadhaiah Manjula; Prasad, Govinda Keerthi; Chen, Chu-Huang; Marathe, Gopal Kedihithlu
  3. Biological Trace Element Research. 2023, Sep 13;
  1. 15.   Delineation of functional subdomains of Huntingtin protein and their interaction with HAP40
  2. Alteen, Matthew G; Deme,Justin; Alvarez, Claudia P; Loppnau, Peter; Hutchinson, Ashley; Seitova, Alma; Chandrasekaran, Renu; Silva Ramos, Eduardo; Secker, Christopher; Alqazzaz, Mona; Wanker, Erich E; Lea, Susan M; Arrowsmith, Cheryl H; Harding, Rachel J
  3. Structure (London, England : 1993). 2023, Sep 7; 31
  1. 16.   Specific inhibition of an anticancer target, polo-like kinase 1, by allosterically dismantling its mechanism of substrate recognition
  2. Park, Jung-Eun; Kirsch, Klara; Lee, Hobin; Oliva, Paola; Ahn, Jong Il; Ravishankar, Harsha; Zeng, Yan; Fox,Stephen; Kirby, Samuel A; Badhwar, Pooja; Andresson,Thorkell; Jacobson, Kenneth A; Lee, Kyung S
  3. Proceedings of the National Academy of Sciences of the United States of America. 2023, Aug 29; 120(35): e2305037120.
  1. 17.   Host, reproductive, and lifestyle factors in relation to quantitative histologic metrics of the normal breast
  2. Abubakar, Mustapha; Klein, Alyssa; Fan, Shaoqi; Lawrence,Scott; Mutreja,Karun; Henry, Jill E; Pfeiffer, Ruth M; Duggan, Maire A; Gierach, Gretchen L
  3. Breast Cancer Research : BCR. 2023, Aug 15; 25(1): 97.
  1. 18.   HIV-1 neutralizing antibodies elicited in humans by a prefusion-stabilized envelope trimer form a reproducible class targeting fusion peptide
  2. Wang, Shuishu; Matassoli, Flavio; Zhang, Baoshan; Liu, Tracy; Shen, Chen-Hsiang; Bylund, Tatsiana; Johnston, Timothy; Henry, Amy R; Teng, I-Ting; Tripathi, Prabhanshu; Becker, Jordan E; Changela, Anita; Chaudhary, Ridhi; Cheng, Cheng; Gaudinski, Martin; Gorman, Jason; Harris, Darcy R; Lee, Myungjin; Morano, Nicholas C; Novik, Laura; O'Dell, Sijy; Olia, Adam S; Parchment, Danealle K; Rawi, Reda; Roberts-Torres, Jesmine; Stephens,Tyler; Tsybovsky,Yaroslav; Wang, Danyi; Van Wazer, David J; Zhou, Tongqing; Doria-Rose, Nicole A; Koup, Richard A; Shapiro, Lawrence; Douek, Daniel C; McDermott, Adrian B; Kwong, Peter D
  3. Cell Reports. 2023, Jul 10; 42(7): 112755.
  1. 19.   Vaccine elicitation and structural basis for antibody protection against alphaviruses
  2. Sutton, Matthew S; Pletnev, Sergei; Callahan, Victoria; Ko, Sungyoul; Tsybovsky,Yaroslav; Bylund, Tatsiana; Casner, Ryan G; Cerutti, Gabriele; Gardner, Christina L; Guirguis, Veronica; Verardi, Raffaello; Zhang, Baoshan; Ambrozak, David; Beddall, Margaret; Lei, Hong; Yang, Eun Sung; Liu, Tracy; Henry, Amy R; Rawi, Reda; Schön, Arne; Schramm, Chaim A; Shen, Chen-Hsiang; Shi, Wei; Stephens,Tyler; Yang, Yongping; Florez, Maria Burgos; Ledgerwood, Julie E; Burke, Crystal W; Shapiro, Lawrence; Fox, Julie M; Kwong, Peter D; Roederer, Mario
  3. Cell. 2023, Jun 08; 186(12): 2672-2689.e25.
  1. 20.   Diverse Murine Vaccinations Reveal Distinct Antibody Classes to Target Fusion Peptide and Variation in Peptide Length to Improve HIV Neutralization
  2. Sastry, Mallika; Changela, Anita; Gorman, Jason; Xu, Kai; Chuang, Gwo-Yu; Shen, Chen-Hsiang; Cheng, Cheng; Geng, Hui; O'Dell, Sijy; Ou, Li; Rawi, Reda; Reveiz, Mateo; Stewart-Jones, Guillaume B E; Wang, Shuishu; Zhang, Baoshan; Zhou, Tongqing; Biju, Andrea; Chambers, Michael; Chen, Xuejun; Corrigan, Angela R; Lin, Bob C; Louder, Mark K; McKee, Krisha; Nazzari, Alexandra F; Olia, Adam S; Parchment, Danealle K; Sarfo, Edward K; Stephens,Tyler; Stuckey, Jonathan; Tsybovsky,Yaroslav; Verardi, Raffaello; Wang, Yiran; Zheng, Cheng-Yan; Chen, Yuling; Doria-Rose, Nicole A; McDermott, Adrian B; Mascola, John R; Kwong, Peter D
  3. Journal of Virology. 2023, Apr 26; e0160422.
  1. 21.   Longitudinal analyses using 18F-Fluorodeoxyglucose positron emission tomography with computed tomography as a measure of COVID-19 severity in the aged, young, and humanized ACE2 SARS-CoV-2 hamster models
  2. Cong, Yu; Lee, Ji Hyun; Perry, Donna L; Cooper, Kurt; Wang, Hui; Dixit, Saurabh; Liu, David X; Feuerstein, Irwin M; Solomon,Jeffrey; Bartos, Christopher; Seidel, Jurgen; Hammoud, Dima A; Adams, Ricky; Anthony, Scott M; Liang, Janie; Schuko, Nicolette; Li, Rong; Liu, Yanan; Wang, Zhongde; Tarbet, E Bart; Hischak, Amanda M W; Hart, Randy; Isic, Nejra; Burdette, Tracey; Drawbaugh, David; Huzella, Louis M; Byrum, Russell; Ragland, Danny; St Claire, Marisa C; Wada, Jiro; Kurtz, Jonathan R; Hensley, Lisa E; Schmaljohn, Connie S; Holbrook, Michael R; Johnson, Reed F
  3. Antiviral Research. 2023, Apr 15; 105605.
  1. 22.   SARS-CoV-2 polyprotein substrate regulates the stepwise Mpro cleavage reaction
  2. Narwal, Manju; Armache, Jean-Paul; Edwards,Thomas; Murakami, Katsuhiko S
  3. The Journal of Biological Chemistry. 2023, Apr 10; 299(5): 104697.
  1. 23.   Chlorambucil-Loaded Graphene-Oxide-Based Nano-Vesicles for Cancer Therapy
  2. Kumari, Surabhi; Nehra, Anuj; Gupta, Kshitij; Puri,Anu; Kumar, Vinay; Singh, Krishna Pal; Kumar, Mukesh; Sharma, Ashutosh
  3. Pharmaceutics. 2023, Feb 15; 15(2):
  1. 24.   Destabilizing NF1 variants act in a dominant negative manner through neurofibromin dimerization
  2. Young, Lucy C; Goldstein de Salazar, Ruby; Han, Sae-Won; Huang, Zi Yi Stephanie; Merk,Alan; Drew,Matt; Darling, Joseph; Wall,Vanessa; Grisshammer, Reinhard; Cheng, Alice; Allison, Madeline R; Sale, Matthew J; Nissley,Dwight; Esposito,Dom; Ognjenovic, Jana; McCormick, Frank
  3. Proceedings of the National Academy of Sciences of the United States of America. 2023, Jan 31; 120(5): e2208960120.
  1. 25.   Three-Dimensional Reconstruction of the Hepatitis C Virus Envelope Glycoprotein E1E2 Heterodimer by Electron Microscopic Analysis
  2. Kanai,Tapan; Hu, Zongyi; Yang,Renbin; Wu, Weimin; Wang, Ziqiu; Ma, Christopher D; Sanchez-Meza, Jaime; Law, Mansun; Houghton, Michael; Law, John Lokman; Logan, Michael; de Val, Natalia; Liang, T Jake
  3. Journal of Virology. 2022, Dec 15; e0178822.
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