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  1. 1.   Examining the bias-efficiency tradeoff from incorporation of nonconcurrent controls in platform trials: A simulation study example from the adaptive COVID-19 treatment trial
  2. Bonnett,Tyler; Potter, Gail E; Dodd, Lori E
  3. Clinical Trials (London, England). 2025, Feb 08; 17407745251313928.
  1. 2.   Structural variant analysis of a cancer reference cell line sample using multiple sequencing technologies
  2. Talsania,Keyur; Shen,Tsai-Wei; Chen, Xiongfong; Jaeger, Erich; Li, Zhipan; Chen, Zhong; Chen, Wanqiu; Tran,Bao; Kusko, Rebecca; Wang, Limin; Pang, Andy Wing Chun; Yang, Zhaowei; Choudhari, Sulbha; Colgan, Michael; Fang, Li Tai; Carroll, Andrew; Shetty,Jyoti; Kriga,Yuliya; German,Oksana; Smirnova,Tatyana; Liu, Tiantain; Li, Jing; Kellman, Ben; Hong, Karl; Hastie, Alex R; Natarajan, Aparna; Moshrefi, Ali; Granat, Anastasiya; Truong, Tiffany; Bombardi, Robin; Mankinen, Veronnica; Meerzaman, Daoud; Mason, Christopher E; Collins, Jack; Stahlberg, Eric; Xiao, Chunlin; Wang, Charles; Xiao, Wenming; Zhao,Yongmei
  3. Genome Biology. 2022, Dec 13; 23(1): 255.
  1. 3.   Design and implementation of an international, multi-arm, multi-stage platform master protocol for trials of novel SARS-CoV-2 antiviral agents: Therapeutics for Inpatients with COVID-19 (TICO/ACTIV-3)
  2. Murray, Daniel D.; Babiker, Abdel G.; Baker, Jason; Barkauskas, Christina E.; Brown, Samuel M.; Chang, Christina C.; Davey, Victoria J.; Gelijns, Annetine C.; Ginde, Adit A.; Grund, Birgit; Higgs, Elizabeth; Hudson, Fleur; Kan, Virginia L.; Lane, H. Clifford; Murray, Thomas A.; Paredes, Roger; Parmar, Mahesh K. B.; Pett, Sarah; Phillips, Andrew N.; Polizzotto, Mark N.; Reilly, Cavan; Sandkovsky, Uriel; Sharma, Shweta; Teitelbaum,Marc; Thompson, B. Taylor; Young, Barnaby E.; Neaton, James D.; Lundgren, Jens D.
  3. Clinical Trials. 2021, Oct 10;
  1. 4.   Profiling SARS-CoV-2 HLA-I peptidome reveals T cell epitopes from out-of-frame ORFs
  2. Weingarten-Gabbay, Shira; Klaeger, Susan; Sarkizova, Siranush; Pearlman, Leah R.; Chen, Da-Yuan; Gallagher, Kathleen M. E.; Bauer, Matthew R.; Taylor, Hannah B.; Dunn, W. Augustine; Tarr, Christina; Sidney, John; Rachimi, Suzanna; Conway, Hasahn L.; Katsis, Katelin; Wang, Yuntong; Leistritz-Edwards, Del; Durkin, Melissa R.; Tomkins-Tinch, Christopher H.; Finkel, Yaara; Nachshon, Aharon; Gentili, Matteo; Rivera, Keith D.; Carulli, Isabel P.; Chea, Vipheaviny A.; Chandrashekar, Abishek; Bozkus, Cansu Cimen; Carrington,Mary; Bhardwaj, Nina; Barouch, Dan H.; Sette, Alessandro; Maus, Marcela; Rice, Charles M.; Clauser, Karl R.; Keskin, Derin B.; Pregibon, Daniel C.; Hacohen, Nir; Carr, Steven A.; Abelin, Jennifer G.; Saeed, Mohsan; Sabeti, Pardis C.
  3. CELL. 2021, Jul 22; 184(15): 3962-3980.e17.
  1. 5.   RAB19 Directs Cortical Remodeling and Membrane Growth for Primary Ciliogenesis
  2. Jewett, Cayla E.; Soh, Adam W. J.; Lin, Carrie H.; Lu,Quanlong; Lencer, Ezra; Westlake,Christopher; Pearson, Chad G.; Prekeris, Rytis
  3. Developmental Cell. 2021, Feb 8; 56(3): 325-340.e8.
  1. 6.   Molecular Features of Cancers Exhibiting Exceptional Responses to Treatment
  2. Wheeler, David A; Takebe, Naoko; Hinoue, Toshinori; Hoadley, Katherine A; Cardenas, Maria F; Hamilton, Alina M; Laird, Peter W; Wang, Linghua; Johnson, Adrienne; Dewal, Ninad; Miller, Vincent; Piñeyro, David; Castro de Moura, Manuel; Esteller, Manel; Shen, Hui; Zenklusen, Jean Claude; Tarnuzzer, Roy; McShane, Lisa M; Tricoli, James V; Williams, Paul M; Lubensky, Irina; O'Sullivan-Coyne, Geraldine; Kohn, Elise C; Little, Richard F; White, Jeffrey; Malik, Shakun; Harris, Lyndsay; Weil, Carol; Chen, Alice P; Karlovich,Chris; Rodgers, Brian; Shankar, Lalitha; Jacobs, Paula; Nolan, Tracy; Hu, Jianhong; Muzny, Donna M; Doddapaneni, Harshavardhan; Korchina, Viktoriya; Gastier-Foster, Julie; Bowen, Jay; Leraas, Kristen; Edmondson,Elijah; Doroshow, James H; Conley, Barbara A; Ivy, S Percy; Staudt, Louis M
  3. Cancer Cell. 2021, Jan 11; 39(1): 38-53.e7.
  1. 7.   Assessing drug-induced long QT and proarrhythmic risk using human stem cell-derived cardiomyocytes in a Ca2+ imaging assay: Evaluation of 28 CiPA compounds at three test sites
  2. Lu, Hua Rong; Zeng, Haoyu; Kettenhofen, Ralf; Guo,Liang; Kopljar, Ivan; van Ammel, Karel; Tekle, Fetene; Teisman, Ard; Zhai, Jin; Clouse, Holly; Pierson, Jennifer; Furniss, Michael; Lagrutta, Armando; Sannajust, Frederick; Gallacher, David J
  3. Toxicological sciences : an official journal of the Society of Toxicology. 2019, AUG; 170(2): 345-356.
  1. 8.   Evaluation of Multiplexed Cytokine and Inflammation Marker Measurements: a Methodologic Study
  2. Chaturvedi, A. K.; Kemp, T. J.; Pfeiffer, R. M.; Biancotto, A.; Williams, M.; Munuo, S.; Purdue, M. P.; Hsing, A. W.; Pinto, L.; McCoy, J. P.; Hildesheim, A.
  3. Cancer Epidemiology Biomarkers & Prevention. 2011, Sep; 20(9): 1902-1911.
  1. 9.   Oxime-Based Click Chemistry in the Development of 3-Isoxazolecarboxylic Acid Containing Inhibitors of Yersinia pestis Protein Tyrosine Phosphatase, YopH
  2. Bahta, M.; Burke, T. R.
  3. Chemmedchem. 2011, Aug; 6(8): 1363-1370.
  1. 10.   The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models
  2. Shi, L. M.; Campbell, G.; Jones, W. D.; Campagne, F.; Wen, Z. N.; Walker, S. J.; Su, Z. Q.; Chu, T. M.; Goodsaid, F. M.; Pusztai, L.; Shaughnessy, J. D.; Oberthuer, A.; Thomas, R. S.; Paules, R. S.; Fielden, M.; Barlogie, B.; Chen, W. J.; Du, P.; Fischer, M.; Furlanello, C.; Gallas, B. D.; Ge, X. J.; Megherbi, D. B.; Symmans, W. F.; Wang, M. D.; Zhang, J.; Bitter, H.; Brors, B.; Bushel, P. R.; Bylesjo, M.; Chen, M. J.; Cheng, J.; Chou, J.; Davison, T. S.; Delorenzi, M.; Deng, Y. P.; Devanarayan, V.; Dix, D. J.; Dopazo, J.; Dorff, K. C.; Elloumi, F.; Fan, J. Q.; Fan, S. C.; Fan, X. H.; Fang, H.; Gonzaludo, N.; Hess, K. R.; Hong, H. X.; Huan, J.; Irizarry, R. A.; Judson, R.; Juraeva, D.; Lababidi, S.; Lambert, C. G.; Li, L.; Li, Y. N.; Li, Z.; Lin, S. M.; Liu, G. Z.; Lobenhofer, E. K.; Luo, J.; Luo, W.; McCall, M. N.; Nikolsky, Y.; Pennello, G. A.; Perkins, R. G.; Philip, R.; Popovici, V.; Price, N. D.; Qian, F.; Scherer, A.; Shi, T. L.; Shi, W. W.; Sung, J.; Thierry-Mieg, D.; Thierry-Mieg, J.; Thodima, V.; Trygg, J.; Vishnuvajjala, L.; Wang, S. J.; Wu, J. P.; Wu, Y. C.; Xie, Q. A.; Yousef, W. A.; Zhang, L. A.; Zhang, X. G.; Zhong, S.; Zhou, Y. M.; Zhu, S.; Arasappan, D.; Bao, W. J.; Lucas, A. B.; Berthold, F.; Brennan, R. J.; Buness, A.; Catalano, J. G.; Chang, C.; Chen, R.; Cheng, Y. Y.; Cui, J. A.; Czika, W.; Demichelis, F.; Deng, X. T.; Dosymbekov, D.; Eils, R.; Feng, Y.; Fostel, J.; Fulmer-Smentek, S.; Fuscoe, J. C.; Gatto, L.; Ge, W. G.; Goldstein, D. R.; Guo, L.; Halbert, D. N.; Han, J.; Harris, S. C.; Hatzis, C.; Herman, D.; Huang, J. P.; Jensen, R. V.; Jiang, R.; Johnson, C. D.; Jurman, G.; Kahlert, Y.; Khuder, S. A.; Kohl, M.; Li, J. Y.; Li, M. L.; Li, Q. Z.; Li, S.; Li, Z. G.; Liu, J.; Liu, Y.; Liu, Z. C.; Meng, L.; Madera, M.; Martinez-Murillo, F.; Medina, I.; Meehan, J.; Miclaus, K.; Moffitt, R. A.; Montaner, D.; Mukherjee, P.; Mulligan, G. J.; Neville, P.; Nikolskaya, T.; Ning, B. T.; Page, G. P.; Parker, J.; Parry, R. M.; Peng, X. J.; Peterson, R. L.; Phan, J. H.; Quanz, B.; Ren, Y.; Riccadonna, S.; Roter, A. H.; Samuelson, F. W.; Schumacher, M. M.; Shambaugh, J. D.; Shi, Q. A.; Shippy, R.; Si, S. Z.; Smalter, A.; Sotiriou, C.; Soukup, M.; Staedtler, F.; Steiner, G.; Stokes, T. H.; Sun, Q. L.; Tan, P. Y.; Tang, R.; Tezak, Z.; Thorn, B.; Tsyganova, M.; Turpaz, Y.; Vega, S. C.; Visintainer, R.; von Frese, J.; Wang, C.; Wang, E.; Wang, J. W.; Wang, W.; Westermann, F.; Willey, J. C.; Woods, M.; Wu, S. J.; Xiao, N. Q.; Xu, J.; Xu, L.; Yang, L.; Zeng, X. A.; Zhang, J. L.; Zhang, L.; Zhang, M.; Zhao, C.; Puri, R. K.; Scherf, U.; Tong, W. D.; Wolfinger, R. D.; Consortium, M.
  3. Pharmacogenomics Journal. 2010, Oct; S5-S16.
  1. 11.   Recent Advances from the National Cancer Institute Alliance for Nanotechnology in Cancer
  2. Farrell, D.; Alper, J.; Ptak, K.; Panaro, N. J.; Grodzinski, P.; Barker, A. D.
  3. Acs Nano. 2010, Feb; 4(2): 589-594.
  1. 12.   Quality Assessment of Microarray Data in a Multicenter Study
  2. Archer, K. J.; Mas, V. R.; O'Brien, T. R.; Pfeiffer, R.; Lum, N. L.; Fisher, R. A.
  3. Diagnostic Molecular Pathology. 2009 18(1): 34-43.
  1. 13.   An integrated cross-platform prognosis study on neuroblastoma patients
  2. Chen, Q. R.; Song, Y. K.; Wei, J. S.; Bilke, S.; Asgharzadeh, S.; Seeger, R. C.; Khan, J.
  3. Genomics. 2008 92(4): 195-203.
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