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  1. 1.   HIVGenoPipe: a nextflow pipeline for the detection of HIV-1 drug resistance using a real-time sample-specific reference sequence
  2. Dotrang,Thoai; Sherman,Brad; Dai,Lisheng; Khan,Muhammad; Highbarger,Helene; Bruchey,Whitney; Laverdure,Sylvain; Baseler,Michael; Imamichi,Tomozumi; Dewar,Robin; Chang,Weizhong
  3. BMC Bioinformatics. 2025, Jul 07; 26(1): 168.
  1. 2.   The Effect of Preanalytical Conditions on Blood-Based Inflammation Biomarkers
  2. O'Donnell, Thomas; Weinstein, Stephanie; Yano, Yukiko; Albert, Paul; Black, Amanda; Brotzman, Michelle; Diaz-Mayoral,Norma; Shreves, Alaina; Gerlanc, Nicole; Wyatt, Kathleen; Gaudet, Mia M; Abnet, Christian; Wentzensen, Nicolas
  3. Journal of Proteome Research. 2025, Jun 18;
  1. 3.   Serological Surveillance of Betacoronaviruses in Bat Guano Collectors: Pre-COVID-19 Pandemic and Post-SARS-CoV-2 Emergence
  2. Ninwattana, Sasiprapa; Sterling, Spencer L; Rattanatumhi, Khwankamon; Thippamom, Nattakarn; Hirunpatrawong, Piyapha; Sangsub, Pakamas; Cheun-Arom, Thaniwan; Esposito,Dominic; Tan, Chee Wah; Yap, Wee Chee; Zhu, Feng; Wang, Lin-Fa; Laing, Eric D; Wacharapluesadee, Supaporn; Putcharoen, Opass
  3. Viruses. 2025, Jun 10; 17(6): 837.
  1. 4.   HPV genotyping agreement between paired cervical cytological sample and biopsy across lesion severity and vaccination
  2. Chen, Shimin; Du, Qiaoyun; Yin,Jian; Xu, Xiaoqian; Chen, Wen; Pan, Qinjing; Zhang, Xun; Hong, Ying; Zhang, Wenhua; Liu, Bin; Cui, Jianfeng; Hu, Shangying; Zhao, Fanghui
  3. Virology Journal. 2025, Jun 02; 22(1): 176.
  1. 5.   Glioblastoma-enriched glycosphingolipids modulate the function of human iNKT cells
  2. Coombs, Morgan J; Dowdy, Tyrone; Alam, Md Masud; Vilamú, Helena Muley; Keretsu, Seketoulie; Khayrullina, Guzal; Celiku, Orieta; Mitrophanov,Alexander; Joshi, Vibhuti; Jung, Jinkyu; Hara, Ayaka; Steffke, Emily E; Latifi, Laila; Kim, Hye; Spurgeon, Jo; Malik, Nargis; Hancock, John C; Ozer, Byram H; Gilbert, Mark R; Gumperz, Jenny; Larion, Mioara; Terabe, Masaki
  3. Neuro-Oncology. 2025, May 28;
  1. 6.   Association between prediagnostic serum metabolites and pancreatic ductal adenocarcinoma risk in two prospective cohorts
  2. Zhang, Ting; Moore, Steven C; Fu, Sheng; Wang,Xiaoyu; Albanes, Demetrius; Weinstein, Stephanie J; Yu, Kai; Stolzenberg-Solomon, Rachael Z
  3. International Journal of Cancer. 2025, May 22;
  1. 7.   Clinicopathologic Features, Management, and Outcomes Of Pediatric CRTC1::TRIM11 and MED15::ATF1 Tumors With Spitzoid Morphology: A Case Series
  2. Sargen, Michael R; Fitzhugh, Madeline H; Ko, Jennifer S; Close, Allison G; Horton, Sara C; Malik, Faizan; Furtado, Larissa V; Bahrami, Armita; Seynnaeve, Brittani K N; Pappo, Alberto S; Liu, Vincent; Cheung, Kevin; Pack, Svetlana D; Xi, Liqiang; Raffeld, Mark; Lee, Ina; Gagan, Jeffrey; Aldape, Kenneth; Barr, Frederic G; Hewitt, Stephen M; Ferrone, Christina K; Hayden, Anna; Hatton, Jessica N; Goldstein, Alisa M; Pfeiffer, Ruth M; Widemann, Brigitte; Malone, Mary Frances Wedekind; Gross, Andrea M; Kaplan, Rosandra; Yohe,Marielle; Berrebi, Kristen G
  3. Pediatric Blood & Cancer. 2025, May 19; e31814.
  1. 8.   Molecular and genetic characterization of sex-linked orange coat color in the domestic cat
  2. Kaelin, Christopher B; McGowan, Kelly A; Trotman, Joshaya C; Koroma, Donald C; David, Victor A; Menotti-Raymond, Marilyn; Graff, Emily C; Schmidt-Küntzel, Anne; Oancea, Elena; Barsh, Gregory S
  3. Current Biology : CB. 2025, May 12;
  1. 9.   Sesquiterpene Coumarin Ethers and Phenylpropanoids from the Roots of Ferula drudeana, the Putative Anatolian Ecotype of the Silphion Plant
  2. Kuran, Fadil Kaan; Senadeera, Sarath P D; Wang,Dongdong; Hwang,Jiyeon; Goncharova,Ekaterina; Wilson,Jennifer; Wamiru, Antony; Wilson,Brice; Pruett, Nathanael; Du,Lin; Hoang, Chuong D; Beutler,John; Miski, Mahmut
  3. Molecules (Basel, Switzerland). 2025, Apr 25; 30(9): 1916.
  1. 10.   Repression of ZNFX1 by LncRNA ZFAS1 mediates tobacco-induced pulmonary carcinogenesis
  2. Xi, Sichuan; Shan, Jigui; Wu, Xinwei; Wang, Haitao; Zhang, Mary R; Oyetunji, Shakirat; Xu, Hong; Xiao, Zuoxiang; Tolunay, Tuana; Carr, Shamus R; Hoang, Chuong D; Schrump, David S
  3. Cellular & Molecular Biology Letters. 2025, Apr 10; 30(1): 44.
  1. 11.   Sleep duration associated with altered oral microbiome diversity and composition in the NIH AARP cohort
  2. Dalton, Kathryn R; Chang, Vicky C; Lee, Mikyeong; Maki, Katherine; Saint-Maurice, Pedro; Purandare, Vaishnavi; Hua,Xing; Wan,Yunhu; Dagnall,Casey; Jones,Kristine; Hicks,Belynda; Hutchinson,Amy; Liao, Linda M; Gail, Mitchell H; Shi, Jianxin; Sinha, Rashmi; Abnet, Christian C; London, Stephanie J; Vogtmann, Emily
  3. Sleep Advances : a journal of the Sleep Research Society. 2025, Apr; 6(2): zpaf023.
  1. 12.   HTLV-1 p13 Protein Hijacks Macrophage Polarization and Promotes T-Cell Recruitment
  2. Moles, Ramona; Omsland, Maria; Pise-Masison, Cynthia A; Subleski,Jeffrey; McVicar,Daniel; Sarkis, Sarkis; Gutowska, Anna; Schifanella, Luca; Doster, Melvin; Washington-Parks, Robyn; Ciminale, Vincenzo; Franchini, Genoveffa
  3. Viruses. 2025, Mar 26; 17(4): 471.
  1. 13.   Circulating cell-free Nucleic Acid Detection for W. bancrofti infections
  2. Salazar, Marisa; Schaughency,Paul; Nutman, Thomas B; Bennuru, Sasisekhar
  3. The Journal of Infectious Diseases. 2025, Mar 17;
  1. 14.   Demographics, epidemiology, mortality and difficult-to-treat resistance patterns of bacterial bloodstream infections in the global US Military Health System from 2010 to 2019: a retrospective cohort study
  2. Vostal, Alexander C; Grance, Melissa; Powers,John; Kadri, Sameer S; Warner, Sarah; Chukwuma, Uzo; Morales, Carlos; Lanteri, Charlotte; Carson, M Leigh; Poitras, Beth; Seliga, Nicholas; Follmann, Dean; Wang,Jing; Parmelee, Edward; Mende, Katrin
  3. BMJ Open. 2025, Mar 03; 15(3): e094861.
  1. 15.   Early influenza virus exposure shapes the B cell response to influenza vaccination in individuals 50 years later
  2. Spangler, Abby; Shimberg, Geoffrey D; Mantus, Grace E; Malek, Rory; Cominsky, Lauren Y; Tsybovsky,Yaroslav; Li,Ning; Gillespie, Rebecca A; Ravichandran, Michelle; Creanga, Adrian; Raab, Julie E; Gajjala, Suprabhath R; Mendoza, Floreliz; Houser, Katherine V; Dropulic, Lesia; McDermott, Adrian B; Kanekiyo, Masaru; Andrews, Sarah F
  3. Immunity. 2025, Feb 25;
  1. 16.   Deletion of a single CTCF motif at the boundary of a chromatin domain with three FGF genes disrupts gene expression and embryonic development
  2. Chakraborty, Shreeta; Wenzlitschke, Nina; Anderson,Matthew; Eraso, Ariel; Baudic, Manon; Thompson, Joyce J; Evans, Alicia A; Shatford-Adams, Lilly M; Chari,Raj; Awasthi,Roackie; Dale, Ryan K; Lewandoski,Mark; Petros, Timothy J; Rocha, Pedro P
  3. Developmental Cell. 2025, Feb 24;
  1. 17.   Combinatorial screen of targeted agents with the PI3K inhibitors inavolisib, alpelisib, duvelisib, and copanlisib in multi-cell type tumor spheroids
  2. Dexheimer,Tom; Davoudi,Zahra; Coussens,Nathan; Silvers,Thomas; Morris, Joel; Takebe, Naoko; Said, Rabih; Moscow, Jeffrey A; Doroshow, James H; Teicher, Beverly A
  3. SLAS Discovery : advancing life sciences R & D. 2025, Feb 23; 100222.
  1. 18.   A Mixed Methods Study of Medication Adherence in Adults with Neurofibromatosis Type 1 (NF1) on a Clinical Trial of Selumetinib
  2. Curlee, Millicent S; Toledo-Tamula, Mary Anne; Baker, Melissa; Wikstrom, Daniel; Harrison, Cynthia; Rhodes, Amanda; Fagan, Margaret; Tibery,Cecilia; Wolters, Pamela L; Widemann, Brigitte C; Gross, Andrea M; Martin, Staci
  3. Cancers. 2025, Jan 17; 17(2):
  1. 19.   Evaluation of Intestinal Permeability Using Serum Biomarkers in Learning Early About Peanut Allergy Trial
  2. Aktas, Ozge Nur; Mateja,Allyson; Li, Min Jenny; Chatman, Lindsay; Grieco, Megan C; Baloh, Carolyn H; Huffaker, Michelle; Wheatley, Lisa M; du Toit, George; Lack, Gideon; Brittain, Erica; Frischmeyer-Guerrerio, Pamela A
  3. Allergy. 2025, Jan 13;
  1. 20.   HIF1a Plays a Crucial Role in the Development of TFE3-Rearranged Renal Cell Carcinoma by Orchestrating a Metabolic Shift Toward Fatty Acid Synthesis
  2. Nishizawa, Hidekazu; Funasaki, Shintaro; Ma, Wenjuan; Kubota, Yoshiaki; Watanabe, Kazuhide; Arima, Yuichiro; Kuroda, Shoichiro; Ito, Takaaki; Furuya, Mitsuko; Motoshima, Takanobu; Nishiyama, Akira; Mehanna, Sally; Satou, Yorifumi; Hasumi, Hisashi; Jikuya, Ryosuke; Makiyama, Kazuhide; Tamura, Tomohiko; Oike, Yuichi; Tanaka, Yasuhito; Suda, Toshio; Schmidt,Laura; Linehan, W Marston; Baba, Masaya; Kamba, Tomomi
  3. Genes to Cells : devoted to molecular & cellular mechanisms. 2025, Jan; 30(1): e13195.
  1. 21.   Validation of a simplified HPV genotyping assay designed for cervical screening in low-resource settings
  2. Desai, Kanan T; Ajenifuja, Kayode O; Adepiti, Clement A; Inturrisi, Federica; Dagnall,Casey; Hoffman,Amanda; Egemen, Didem; Gage, Julia C; Wentzensen, Nicolas; de Sanjose, Silvia; Schiffman, Mark
  3. Journal of Clinical Microbiology. 2024, Dec 31; e0163924.
  1. 22.   Analysis of the progression of cervical cancer in a low-and-middle-income country: From pre-malignancy to invasive disease
  2. Robinson, Emma; Rodriguez, Isabel; Argueta, Victor; Xie, Yi; Lou, Hong; Milano, Rose; Lee, Hyo Jung; Burdett, Laurie; Mishra,Sambit; Yeager,Meredith; Mirabello, Lisa; Dean, Michael; Orozco, Roberto
  3. Tumour Virus Research. 2024, Dec 11; 200299.
  1. 23.   Insights into biofilm architecture and maturation enable improved clinical strategies for exopolysaccharide-targeting therapeutics
  2. Temme,Joel; Tan, Zibin; Li,Mi; Yang,Mo; Wlodawer,Alexander; Huang, Xuefei; Schneekloth,Jay; Gildersleeve,Jeffrey
  3. Cell Chemical Biology. 2024, Dec 02;
  1. 24.   A randomised, placebo-controlled, phase III trial of leniolisib in activated phosphoinositide 3-kinase delta (PI3Kd) syndrome (APDS): Adolescent and adult subgroup analysis
  2. Rao, V Koneti; Šedivá, Anna; Dalm, Virgil A S H; Plebani, Alessandro; Schuetz, Catharina; Shcherbina, Anna; Trizzino, Antonino; Zharankova, Yulia; Orpia, Alanvin; Kulm,Elaine; Webster, Sharon; Körholz, Julia; Lougaris, Vassilios; Rodina, Yulia; Conlon, Niall; Coulter, Tanya; Bradt, Jason; Relan, Anurag; Uzel, Gulbu
  3. Clinical Immunology (Orlando, Fla.). 2024, Nov 17; 110400.
  1. 25.   Suspension electrospinning of decellularized extracellular matrix: A new method to preserve bioactivity
  2. Jones, Sarah; VandenHeuvel, Sabrina; Luengo Martinez, Andres; Birur, Ruchi; Burgeson, Eric; Gilbert, Isabelle; Baker, Aaron; Wolf,Matthew; Raghavan, Shreya A; Rogers, Simon; Cosgriff-Hernandez, Elizabeth
  3. Bioactive Materials. 2024, Nov; 41: 640-656.
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