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  1. 1.   The trajectory patterns of single HIV-1 virus-like particle in live CD4 cells: A real time three-dimensional multi-resolution microscopy study using encapsulated nonblinking giant quantum dot
  2. Li, Wei-You; Yin, Shuhui; Huang, Szu-Wei; Yang, Ming-Hui; Chen, Patricia Mt; Wu, Shang-Rung; Welsher, Kevin; Yang, Haw; Arthur Chen, Yi-Ming
  3. Journal of Microbiology, Immunology, and Infection = Wei mian yu gan ran za zhi. 2022, Aug 28;
  1. 2.   Controlled Organization of Inorganic Materials Using Biological Molecules for Activating Therapeutic Functionalities
  2. Chandler, Morgan; Minevich, Brian; Roark, Brandon; Viard,Mathias; Johnson, M Brittany; Rizvi, Mehedi H; Deaton, Thomas A; Kozlov, Seraphim; Panigaj, Martin; Tracy, Joseph B; Yingling, Yaroslava G; Gang, Oleg; Afonin, Kirill A
  3. ACS applied materials & interfaces. 2021, Aug 25; 13(33): 39030-39041.
  1. 3.   Molecular insight into the interaction mechanisms of an annulated pyrazole (DB08446) with HIV-1 RT: a QM and QM/QM' study
  2. Wang, Yueping; Wang, Jiangyuan; Zhong, Peng; Li, Yiming; Lai, Christopher; He, Yanping
  3. MONATSHEFTE FUR CHEMIE. 2018, Oct; 149(10): 1919-1929.
  1. 4.   NMR probing of invisible excited states using selectively labeled RNAs
  2. Leblanc, Regan; Longhini, Andrew P; Tugarinov, Vitali; Dayie, T Kwaku
  3. Journal of Biomolecular NMR. 2018, Jul; 71(3): 165-172.
  1. 5.   Designing brighter near-infrared fluorescent proteins: insights from structural and biochemical studies
  2. Baloban, Mikhail; Shcherbakova, Daria M.; Pletnev, Sergei; Pletnev, Vladimir Z.; Lagarias, J. Clark; Verkhusha, Vladislav V.
  3. Chemical Science. 2017, Jun; 8(6): 4546-4557.
  1. 6.   Peptide Mediated Intracellular Delivery of Semiconductor Quantum Dots
  2. Kapur, Anshika; Safi, Malak; Domitrovic, Tatiana; Medina, Scott; Palui, Goutam; Johnson, John E.; Schneider, Joel; Mattoussi, Hedi; Osinski, M; Parak, WJ; Liang, XJ
  3. COLLOIDAL NANOPARTICLES FOR BIOMEDICAL APPLICATIONS XII (Book Series: Proceedings of SPIE). 2017, JAN 28-31; 10078 Article Number: UNSP 100780S .
  1. 7.   Fluorescence Blinking as an Output Signal for Biosensing
  2. Roark, Brandon; Tan, Jenna A.; Ivanina, Anna; Chandler, Morgan; Castaneda, Jose; Kim, Ho Shin; Jawahar, Shriram; Viard, Mathias; Talic, Strahina; Wustholz, Kristin L.; Yingling, Yaroslava G.; Jones, Marcus; Afonin, Kirill A.
  3. ACS Sensors. 2016, 2016-11-01; 1(11): 1295-1300.
  1. 8.   MR and optical imaging of early micrometastases in lymph nodes: triple labeling with nano-sized agents yielding distinct signals
  2. Kosaka, N.; Bernardo, M.; Mitsunaga, M.; Choyke, P. L.; Kobayashi, H.
  3. Contrast Media & Molecular Imaging. 2012, Mar; 7(2): 247-253.
  1. 9.   Measurement of (1)H-(15)N and (1)H-(13)C residual dipolar couplings in nucleic acids from TROSY intensities
  2. Ying, J. F.; Wang, J. B.; Grishaev, A.; Yu, P.; Wang, Y. X.; Bax, A.
  3. Journal of Biomolecular Nmr. 2011, Sep; 51(1-2): 89-103.
  1. 10.   Software and resources for computational medicinal chemistry
  2. Liao, C. Z.; Sitzmann, M.; Pugliese, A.; Nicklaus, M. C.
  3. Future Medicinal Chemistry. 2011, Jun; 3(8): 1057-1085.
  1. 11.   Supramolecular complexes of quantum dots and a polyamidoamine (PAMAM)-folate derivative for molecular imaging of cancer cells
  2. Geraldo, D. A.; Duran-Lara, E. F.; Aguayo, D.; Cachau, R. E.; Tapia, J.; Esparza, R.; Yacaman, M. J.; Gonzalez-Nilo, F. D.; Santos, L. S.
  3. Analytical and Bioanalytical Chemistry. 2011, Apr; 400(2): 483-492.
  1. 12.   Photo- and Biophysical Studies of Lectin-Conjugated Fluorescent Nanoparticles Reduced Sensitivity in High Density Assays
  2. Wang, Y. Q.; Gildersleeve, J. C.; Basu, A.; Zimmt, M. B.
  3. Journal of Physical Chemistry B. 2010, Nov; 114(45): 14487-14494.
  1. 13.   70% efficiency of bistate molecular machines explained by information theory, high dimensional geometry and evolutionary convergence
  2. Schneider, T. D.
  3. Nucleic Acids Research. 2010, Oct; 38(18): 5995-6006.
  1. 14.   Modeling spectral tuning in monomeric teal fluorescent protein mTFP1
  2. Topol, I.; Collins, J.; Nemukhin, A.
  3. Biophysical Chemistry. 2010, Jul; 149(3): 78-82.
  1. 15.   Lack of Significant Dermal Penetration of Titanium Dioxide from Sunscreen Formulations Containing Nano- and Submicron-Size TiO2 Particles
  2. Sadrieh, N.; Wokovich, A. M.; Gopee, N. V.; Zheng, J. W.; Haines, D.; Parmiter, D.; Siitonen, P. H.; Cozart, C. R.; Patri, A. K.; McNeil, S. E.; Howard, P. C.; Doub, W. H.; Buhse, L. F.
  3. Toxicological Sciences. 2010, May; 115(1): 156-166.
  1. 16.   On photoabsorption of the neutral form of the green fluorescent protein chromophore
  2. Topol, I.; Collins, J.; Polyakov, I.; Grigorenko, B.; Nemukhin, A.
  3. Biophysical Chemistry. 2009, Nov; 145(1): 1-6.
  1. 17.   Understanding the Design Principles of Living Systems at the Nanoscale
  2. Jacobs, A.; Blumenthal, R.
  3. Current Nanoscience. 2009 5(1): 45-50.
  1. 18.   Semiconductor Nanocrystals in Autophagy Research: Methodology Improvement at Nanosized Scale
  2. Seleverstov, O.; Phang, J. M.; Zabirnyk, O.
  3. Autophagy in Mammalian Systems. 2009; 452, Pt B : 277-296.
  1. 19.   Role for nanomaterial-autophagy interaction in neurodegenerative disease
  2. Stern, S. T.; Johnson, D. N.
  3. Autophagy. 2008 4(8): 1097-1100.
  1. 20.   Induction of autophagy in porcine kidney cells by quantum dots: A common cellular response to nanomaterials?
  2. Stern, S. T.; Zolnik, B. S.; McLel, C. B.; Clogston, J.; Zheng, J. W.; McNeil, S. E.
  3. Toxicological Sciences. 2008 106(1): 140-152.
  1. 21.   Mechanism of the myosin catalyzed hydrolysis of ATP as rationalized by molecular modeling
  2. Grigorenko, B. L.; Rogov, A. V.; Topol, I. A.; Burt, S. K.; Martinez, H. M.; Nemukhin, A. V.
  3. Proceedings of the National Academy of Sciences of the United States of America. 2007, Apr; 104(17): 7057-7061.
  1. 22.   Comparison of large basis set DFT and MP2 calculations in the study of the barrier for internal rotation of 2,3,5,6-tetrafluoroanisole
  2. Kieninger, M.; Cachau, R. E.; Oberhammer, H.; Ventura, O. N.
  3. International Journal of Quantum Chemistry. 2007, Feb; 107(2): 403-417.
  1. 23.   Natural resonance structures and aromaticity of the nucleobases
  2. Sun, G. Y.; Nicklaus, M. C.
  3. Theoretical Chemistry Accounts. 2007, Feb; 117(2): 323-332.
  1. 24.   Spectral near-infrared fluorescence imaging of curved surfaces using projection reconstruction algorithms
  2. Hama, Y.; Koyama, Y.; Bernardo, M.; Choyke, P. L.; Kobayashi, H.
  3. Contrast Media & Molecular Imaging. 2007, Mar-Apr; 2(2): 82-87.
  1. 25.   Molecular modeling the reaction mechanism of serine-carboxyl peptidases
  2. Bravaya, K.; Bochenkova, A.; Grigorenko, B.; Topol, I.; Burt, S.; Nemukhin, A.
  3. Journal of Chemical Theory and Computation. 2006, Jul; 2(4): 1168-1175.
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