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  1. 1.   Evidence of SARS-CoV-2-Specific T-Cell-Mediated Myocarditis in a MIS-A Case
  2. Vannella, Kevin M; Oguz,Cihan; Stein, Sydney R; Pittaluga, Stefania; Dikoglu, Esra; Kanwal, Arjun; Ramelli, Sabrina C; Briese, Thomas; Su, Ling; Wu, Xiaolin; Ramos-Benitez, Marcos J; Perez-Valencia, Luis J; Babyak, Ashley; Cha, Nu Ri; Chung, Joon-Yong; Ylaya, Kris; Madathil, Ronson J; Saharia, Kapil K; Scalea, Thomas M; Tran, Quincy K; Herr, Daniel L; Kleiner, David E; Hewitt, Stephen M; Notarangelo, Luigi D; Grazioli, Alison; Chertow, Daniel S
  3. Frontiers in Immunology. 2021, Dec 9; 12: 779026.
  1. 2.   Arrow pushing in RNA modification sequencing
  2. Bartee,David; Thalalla Gamage,Supuni; Link,Courtney; Meier,Jordan
  3. Chemical Society reviews. 2021, Jul 14;
  1. 3.   HIVIntact: a python-based tool for HIV-1 genome intactness inference
  2. Wright, Imogen A.; Bale, Michael J.; Shao,Wei; Hu,Wei-Shau; Coffin, John M.; Van Zyl, Gert U.; Kearney,Mary
  3. Retrovirology. 2021, Jun 27; 18(1):
  1. 4.   dagLogo: An R/Bioconductor package for identifying and visualizing differential amino acid group usage in proteomics data
  2. Ou, Jianhong; Liu, Haibo; Nirala, Niraj K.; Stukalov, Alexey; Acharya,Usha; Green, Michael R.; Zhu, Lihua Julie
  3. PLOS ONE. 2020, NOV 6; 15(11):
  1. 5.   Viral, immunologic, and clinical features of primary effusion lymphoma
  2. Lurain, Kathryn; Polizzotto, Mark N.; Aleman, Karen; Bhutani, Manisha; Wyvill, Kathleen M.; Goncalves, Priscila H.; Ramaswami, Ramya; Marshall,Vickie; Miley,Wendell; Steinberg, Seth M.; Little, Richard F.; Wilson, Wyndham; Filie, Armando C.; Pittaluga, Stefania; Jaffe, Elaine S.; Whitby,Denise; Yarchoan, Robert; Uldrick, Thomas S.
  3. Blood. 2019, Apr 18; 133(16): 1753-1761.
  1. 6.   Gag and Env Conserved Element CE DNA Vaccines Elicit Broad Cytotoxic T Cell Responses Targeting Subdominant Epitopes of HIV and SIV Able to Recognize Virus-infected Cells in Macaques
  2. Hu, Xintao; Lu, Zhongyan; Valentin, Antonio; Rosati, Margherita; Broderick, Kate E; Sardesai, Niranjan Y; Marx, Preston A; Mullins, James I; Pavlakis, George; Felber, Barbara
  3. Human Vaccines & Immunotherapeutics. 2018, Jun 25; 14(9): 2163-2177.
  1. 7.   Identification of a nucleoside analog active against adenosine kinase-expressing plasma cell malignancies
  2. Nayar, Utthara; Sadek, Jouliana; Reichel, Jonathan; Hernandez-Hopkins, Denise; Akar, Gunkut; Barelli, Peter J.; Sahai, Michelle A.; Zhou, Hufeng; Totonchy, Jennifer; Jayabalan, David; Niesvizky, Ruben; Guasparri, Ilaria; Hassane, Duane; Liu, Yifang; Sei, Shizuko; Shoemaker, Robert; Warren, J. David; Elemento, Olivier; Kaye, Kenneth M.; Cesarman, Ethel
  3. JOURNAL OF CLINICAL INVESTIGATION. 2017, Jun; 127(6): 2066-2080.
  1. 8.   High-throughput single-molecule screen for small-molecule perturbation of splicing and transcription kinetics
  2. Day, C. R.; Chen, H.; Coulon, A.; Meier, J. L.; Larson, D. R.
  3. Methods (San Diego, Calif.). 2016, 1-Mar; 96: 59-68.
  1. 9.   Restricted Replication of Xenotropic Murine Leukemia Virus-Related Virus in Pigtailed Macaques
  2. Del Prete, G. Q.; Kearney, M. F.; Spindler, J.; Wiegand, A.; Chertova, E.; Roser, J. D.; Estes, J. D.; Hao, X. P.; Trubey, C. M.; Lara, A.; Lee, K.; Chaipan, C.; Bess, J. W.; Nagashima, K.; Keele, B. F.; Macallister, R.; Smedley, J.; Pathak, V. K.; KewalRamani, V. N.; Coffin, J. M.; Lifson, J. D.
  3. Journal of Virology. 2012, Mar; 86(6): 3152-3166.
  1. 10.   The chromosome 2p21 region harbors a complex genetic architecture for association with risk for renal cell carcinoma
  2. Han, S. S.; Yeager, M.; Moore, L. E.; Wei, M. H.; Pfeiffer, R.; Toure, O.; Purdue, M. P.; Johansson, M.; Scelo, G.; Chung, C. C.; Gaborieau, V.; Zaridze, D.; Schwartz, K.; Szeszenia-Dabrowska, N.; Davis, F.; Bencko, V.; Colt, J. S.; Janout, V.; Matveev, V.; Foretova, L.; Mates, D.; Navratilova, M.; Boffetta, P.; Berg, C. D.; Grubb, R. L.; Stevens, V. L.; Thun, M. J.; Diver, W. R.; Gapstur, S. M.; Albanes, D.; Weinstein, S. J.; Virtamo, J.; Burdett, L.; Brisuda, A.; McKay, J. D.; Fraumeni, J. F.; Chatterjee, N.; Rosenberg, P. S.; Rothman, N.; Brennan, P.; Chow, W. H.; Tucker, M. A.; Chanock, S. J.; Toro, J. R.
  3. Human Molecular Genetics. 2012, Mar; 21(5): 1190-1200.
  1. 11.   Failure to Confirm XMRV/MLVs in the Blood of Patients with Chronic Fatigue Syndrome: A Multi-Laboratory Study
  2. Simmons, G.; Glynn, S. A.; Komaroff, A. L.; Mikovits, J. A.; Tobler, L. H.; Hackett, J.; Tang, N.; Switzer, W. M.; Heneine, W.; Hewlett, I. K.; Zhao, J. Q.; Lo, S. C.; Alter, H. J.; Linnen, J. M.; Gao, K.; Coffin, J. M.; Kearney, M. F.; Ruscetti, F. W.; Pfost, M. A.; Bethel, J.; Kleinman, S.; Holmberg, J. A.; Busch, M. P.; Blood, X. S. R. W. G.
  3. Science. 2011, Nov; 334(6057): 814-817.
  1. 12.   Measurement of (1)H-(15)N and (1)H-(13)C residual dipolar couplings in nucleic acids from TROSY intensities
  2. Ying, J. F.; Wang, J. B.; Grishaev, A.; Yu, P.; Wang, Y. X.; Bax, A.
  3. Journal of Biomolecular Nmr. 2011, Sep; 51(1-2): 89-103.
  1. 13.   SHAPE analysis of the FIV Leader RNA reveals a structural switch potentially controlling viral packaging and genome dimerization
  2. Kenyon, J. C.; Tanner, S. J.; Legiewicz, M.; Phillip, P. S.; Rizvi, T. A.; Le Grice, S. F. J.; Lever, A. M. L.
  3. Nucleic Acids Research. 2011, Aug; 39(15): 6692-6704.
  1. 14.   Recombinant Origin of the Retrovirus XMRV
  2. Paprotka, T.; Delviks-Frankenberry, K. A.; Cingoz, O.; Martinez, A.; Kung, H. J.; Tepper, C. G.; Hu, W. S.; Fivash, M. J.; Coffin, J. M.; Pathak, V. K.
  3. Science. 2011, Jul; 333(6038): 97-101.
  1. 15.   Reconciling Apparent Conflicts between Mitochondrial and Nuclear Phylogenies in African Elephants
  2. Ishida, Y.; Oleksyk, T. K.; Georgiadis, N. J.; David, V. A.; Zhao, K.; Stephens, R. M.; Kolokotronis, S. O.; Roca, A. L.
  3. Plos One. 2011, Jun; 6(6): 16.
  1. 16.   Identification of Cis-Acting Elements in the 3 '-Untranslated Region of the Dengue Virus Type 2 RNA That Modulate Translation and Replication
  2. Manzano, M.; Reichert, E. D.; Polo, S.; Falgout, B.; Kasprzak, W.; Shapiro, B. A.; Padmanabhan, R.
  3. Journal of Biological Chemistry. 2011, Jun; 286(25): 22521-22534.
  1. 17.   High-dose zidovudine plus valganciclovir for Kaposi sarcoma herpesvirus-associated multicentric Castleman disease: a pilot study of virus-activated cytotoxic therapy
  2. Uldrick, T. S.; Polizzotto, M. N.; Aleman, K.; O'Mahony, D.; Wyvill, K. M.; Wang, V.; Marshall, V.; Pittaluga, S.; Steinberg, S. M.; Tosato, G.; Whitby, D.; Little, R. F.; Yarchoan, R.
  3. Blood. 2011, Jun; 117(26): 6977-6986.
  1. 18.   Estimate of effective recombination rate and average selection coefficient for HIV in chronic infection
  2. Batorsky, R.; Kearney, M. F.; Palmer, S. E.; Maldarelli, F.; Rouzine, I. M.; Coffin, J. M.
  3. Proceedings of the National Academy of Sciences of the United States of America. 2011, Apr; 108(14): 5661-5666.
  1. 19.   A Molecular Phylogeny of Living Primates
  2. Perelman, P.; Johnson, W. E.; Roos, C.; Seuanez, H. N.; Horvath, J. E.; Moreira, M. A. M.; Kessing, B.; Pontius, J.; Roelke, M.; Rumpler, Y.; Schneider, M. P. C.; Silva, A.; O'Brien, S. J.; Pecon-Slattery, J.
  3. Plos Genetics. 2011, Mar; 7(3): 17.
  1. 20.   Non-B DB: a database of predicted non-B DNA-forming motifs in mammalian genomes
  2. Cer, R. Z.; Bruce, K. H.; Mudunuri, U. S.; Yi, M.; Volfovsky, N.; Luke, B. T.; Bacolla, A.; Collins, J. R.; Stephens, R. M.
  3. Nucleic Acids Research. 2011, Jan; 39: D383-D391.
  1. 21.   Genome-wide characterization of centromeric satellites from multiple mammalian genomes
  2. Alkan, C.; Cardone, M. F.; Catacchio, C. R.; Antonacci, F.; O'Brien, S. J.; Ryder, O. A.; Purgato, S.; Zoli, M.; Della Valle, G.; Eichler, E. E.; Ventura, M.
  3. Genome Research. 2011, Jan; 21(1): 137-145.
  1. 22.   Molecular Evolutionary Analysis of ABCB5: The Ancestral Gene Is a Full Transporter with Potentially Deleterious Single Nucleotide Polymorphisms
  2. Moitra, K.; Scally, M.; McGee, K.; Lancaster, G.; Gold, B.; Dean, M.
  3. Plos One. 2011, Jan; 6(1): 12.
  1. 23.   The Role of Worksite and Home Smoking Bans in Smoking Cessation Among US Employed Adult Female Smokers
  2. Rose, A.; Fagan, P.; Lawrence, D.; Hart, A.; Shavers, V. L.; Gibson, J. T.
  3. American Journal of Health Promotion. 2011, Sep-Oct; 26(1): 26-36.
  1. 24.   XMRV: A New Virus in Prostate Cancer?
  2. Aloia, A. L.; Sfanos, K. S.; Isaacs, W. B.; Zheng, Q. Z.; Maldarelli, F.; De Marzo, A. M.; Rein, A.
  3. Cancer Research. 2010, Dec; 70(24): 10028-10033.
  1. 25.   The xenotropic murine leukemia virus-related retrovirus debate continues at first international workshop
  2. Stoye, J. P.; Silverman, R. H.; Boucher, C. A.; Le Grice, S. F. J.
  3. Retrovirology. 2010, Dec; 7: 10.
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