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  1. 1.   Genomes and epigenomes of matched normal and tumor breast tissue reveal diverse evolutionary trajectories and tumor-host interactions
  2. Zhu, Bin; Tapinos, Avraam; Koka, Hela; Yi Lee, Priscilla Ming; Zhang, Tongwu; Zhu, Wei; Wang, Xiaoyu; Klein, Alyssa; Lee, DongHyuk; Tse, Gary M; Tsang, Koon-Ho; Wu, Cherry; Hua, Min; Highfill,Chad; Lenz,Petra; Zhou,Weiyin; Wang,Difei; Luo,Wen; Jones,Kristine; Hutchinson,Amy; Hicks,Belynda; Garcia-Closas, Montserrat; Chanock, Stephen; Tse, Lap Ah; Wedge, David C; Yang, Xiaohong R
  3. American Journal of Human Genetics. 2024, Oct 29;
  1. 2.   Oral microbiome and risk of incident head and neck cancer: A nested case-control study
  2. Wu, Zeni; Han, Yongli; Wan, Yunhu; Hua, Xing; Chill, Samantha S; Teshome, Kedest; Zhou, Weiyin; Liu, Jia; Wu, Dongjing; Hutchinson,Amy; Jones,Kristine; Dagnall,Casey; Hicks,Belynda; Liao, Linda; Hallen-Adams, Heather; Shi, Jianxin; Abnet, Christian C; Sinha, Rashmi; Chaturvedi, Anil; Vogtmann, Emily
  3. Oral Oncology. 2023, Jan 05; 137: 106305.
  1. 3.   Proteogenomic characterization of pancreatic ductal adenocarcinoma
  2. Cao, Liwei; Huang, Chen; Zhou, Daniel Cui; Hu, Yingwei; Lih, T. Mamie; Savage, Sara R.; Krug, Karsten; Clark, David J.; Schnaubelt, Michael; Chen, Lijun; Leprevost, Felipe da Veiga; Eguez, Rodrigo Vargas; Yang, Weiming; Pan, Jianbo; Wen, Bo; Dou, Yongchao; Jiang, Wen; Liao, Yuxing; Shi, Zhiao; Terekhanova, Nadezhda; Cao, Song; Lu, Rita Jui-Hsien; Li, Yize; Liu, Ruiyang; Zhu, Houxiang; Ronning, Peter; Wu, Yige; Wyczalkowski, Matthew A.; Easwaran, Hariharan; Danilova, Ludmila; Mer, Arvind Singh; Yoo, Seungyeul; Wang, Joshua M.; Liu, Wenke; Haibe-Kains, Benjamin; Thiagarajan,Mathangi; Jewell, Scott D.; Hostetter, Galen; Newton, Chelsea J.; Li, Qing Kay; Roehr, Michael H.; Fenyo, David; Wang, Pei; Nesvizhskii, Alexey; Mani, D. R.; Omenn, Gilbert S.; Boja, Emily S.; Mesri, Mehdi; Robles, Ana; Rodriguez, Henry; Bathe, Oliver F.; Chan, Daniel W.; Hruban, Ralph H.; Ding, Li; Zhang, Bing; Zhang, Hui
  3. Cell. 2021, Sep 16; 184(19): 5031-5052.e26.
  1. 4.   Disseminated Mycobacterium marinum in HIV unmasked by Immune Reconstitution Inflammatory Syndrome
  2. Manion, Maura; Dulanto Chiang, Augusto; Pei, Luxin; Wong, Chun-Shu; Khil, Pavel; Hammoud, Dima A; Anderson, Megan; Laidlaw, Elizabeth; Kuriakose,Safia; Lisco, Andrea; Zelazny, Adrian M; Dekker, John P; Sereti, Irini
  3. The Journal of infectious diseases. 2021, Aug 1; 224(3): 453-457.
  1. 5.   Proteogenomic and metabolomic characterization of human glioblastoma
  2. Wang, Liang-Bo; Karpova, Alla; Gritsenko, Marina A.; Kyle, Jennifer E.; Cao, Song; Li, Yize; Rykunov, Dmitry; Colaprico, Antonio; Rothstein, Joseph H.; Hong, Runyu; Stathias, Vasileios; Cornwell, MacIntosh; Petralia, Francesca; Wu, Yige; Reva, Boris; Krug, Karsten; Pugliese, Pietro; Kawaler, Emily; Olsen, Lindsey K.; Liang, Wen-Wei; Song, Xiaoyu; Dou, Yongchao; Wendl, Michael C.; Caravan, Wagma; Liu, Wenke; Zhou, Daniel Cui; Ji, Jiayi; Tsai, Chia-Feng; Petyuk, Vladislav A.; Moon, Jamie; Ma, Weiping; Chu, Rosalie K.; Weitz, Karl K.; Moore, Ronald J.; Monroe, Matthew E.; Zhao, Rui; Yang, Xiaolu; Yoo, Seungyeul; Krek, Azra; Demopoulos, Alexis; Zhu, Houxiang; Wyczalkowski, Matthew A.; McMichael, Joshua F.; Henderson, Brittany L.; Lindgren, Caleb M.; Boekweg, Hannah; Lu, Shuangjia; Baral, Jessika; Yao, Lijun; Stratton, Kelly G.; Bramer, Lisa M.; Zink, Erika; Couvillion, Sneha P.; Bloodsworth, Kent J.; Satpathy, Shankha; Sieh, Weiva; Boca, Simina M.; Schurer, Stephan; Chen, Feng; Wiznerowicz, Maciej; Ketchum, Karen A.; Boja, Emily S.; Kinsinger, Christopher R.; Robles, Ana; Hiltke, Tara; Thiagarajan,Mathangi; Nesvizhskii, Alexey; Zhang, Bing; Mani, D. R.; Ceccarelli, Michele; Chen, Xi S.; Cottingham, Sandra L.; Li, Qing Kay; Kim, Albert H.; Fenyo, David; Ruggles, Kelly; Rodriguez, Henry; Mesri, Mehdi; Payne, Samuel H.; Resnick, Adam C.; Wang, Pei; Smith, Richard D.; Iavarone, Antonio; Chheda, Milan G.; Barnholtz-Sloan, Jill S.; Rodland, Karin D.; Liu, Tao; Ding, Li
  3. Cancer Cell. 2021, Apr 12; 39(4): 509-528.e20.
  1. 6.   Multiple-Cohort Genetic Association Study Reveals CXCR6 as a New Chemokine Receptor Involved in Long-Term Nonprogression to AIDS
  2. Limou, S.; Coulonges, C.; Herbeck, J. T.; van Manen, D.; An, P.; Le Clerc, S.; Delaneau, O.; Diop, G.; Taing, L.; Montes, M.; van't Wout, A. B.; Gottlieb, G. S.; Therwath, A.; Rouzioux, C.; Delfraissy, J. F.; Lelievre, J. D.; Levy, Y.; Hercberg, S.; Dina, C.; Phair, J.; Donfield, S.; Goedert, J. J.; Buchbinder, S.; Estaquier, J.; Schachter, F.; Gut, I.; Froguel, P.; Mullins, J. I.; Schuitemaker, H.; Winkler, C.; Zagury, J. F.
  3. Journal of Infectious Diseases. 2010, Sep; 202(6): 908-915.
  1. 7.   Host Determinants of HIV-1 Control in African Americans
  2. Pelak, K.; Goldstein, D. B.; Walley, N. M.; Fellay, J.; Ge, D.; Shianna, K. V.; Gumbs, C.; Gao, X.; Maia, J. M.; Cronin, K. D.; Hussain, S. K.; Carrington, M.; Michael, N. L.; Weintrob, A. C.; Natl Inst Allergy Infect, D.
  3. Journal of Infectious Diseases. 2010, Apr; 201(8): 1141-1149.
  1. 8.   Artifacts of the 1.9x Feline Genome Assembly Derived from the Feline-Specific Satellite Sequence
  2. Pontius, J. U.; O'Brien, S. J.
  3. Journal of Heredity. 2009 100: S14-S18.
  1. 9.   Long-term storage and recovery of buccal cell DNA from treated cards
  2. Sigurdson, A. J.; Ha, M.; Cosentino, M.; Franklin, T.; Haque, K. A.; Qi, Y.; Glaser, C.; Reid, Y.; Vaught, J. B.; Bergen, A. W.
  3. Cancer Epidemiology Biomarkers & Prevention. 2006, Feb; 15(2): 385-388.
  1. 10.   Genomic inferences from Afrotheria and the evolution of elephants
  2. Roca, A. L.; O'Brien, S. J.
  3. Current Opinion in Genetics & Development. 2005, DEC; 15(6): 652-659.
  1. 11.   Big cat genomics
  2. O'Brien, S. J.; Johnson, W. E.
  3. Annual review of genomics and human genetics. 2005 6: 407-429.
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