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  1. 1.   Structural insights into the cooperative nucleosome recognition and chromatin opening by FOXA1 and GATA4
  2. Zhou, Bing-Rui; Feng, Hanqiao; Huang, Furong; Zhu, Iris; Portillo-Ledesma, Stephanie; Shi,Dan; Zaret, Kenneth S; Schlick, Tamar; Landsman, David; Wang, Qianben; Bai, Yawen
  3. Molecular Cell. 2024, Jul 31;
  1. 2.   Iterative epigenomic analyses in the same single cell
  2. Ohnuki, Hidetaka; Venzon, David J.; Lobanov,Alexei; Tosato, Giovanna
  3. Genome Research. 2021, Oct; 31(11): 1819-1830.
  1. 3.   A Shared Regulatory Element Controls the Initiation of Tcf7 Expression During Early T Cell and Innate Lymphoid Cell Developments
  2. Harly, Christelle; Kenney, Devin; Wang, Yueqiang; Ding, Yi; Zhao, Yongge; Awasthi,Roackie; Bhandoola, Avinash
  3. Frontiers in immunology. 2020, MAR 20; 11: 470.
  1. 4.   Chemical genomics reveals histone deacetylases are required for core regulatory transcription
  2. Gryder, Berkley E.; Wu, Lei; Woldemichael,Girma; Pomella, Silvia; Quinn, Taylor R.; Park, Paul M. C.; Cleveland, Abigail; Stanton, Benjamin Z.; Song, Young; Rota, Rossella; Wiest, Olaf; Yohe, Marielle E.; Shern, Jack F.; Qi, Jun; Khan, Javed
  3. Nature communications. 2019, Jul 8; 10(1):
  1. 5.   C/EBP beta regulates delta-secretase expression and mediates pathogenesis in mouse models of Alzheimer's disease
  2. Wang, Zhi-Hao; Gong, Ke; Liu, Xia; Zhang, Zhentao; Sun, Xiaoou; Wei, Zheng Zachory; Yu, Shan Ping; Manfredsson, Fredric P.; Sandoval, Ivette M.; Johnson, Peter; Jia, Jianping; Wang, Jian-Zhi; Ye, Keqiang
  3. NATURE COMMUNICATIONS. 2018, May 3; 9
  1. 6.   Common genetic variants in the PSCA gene influence gene expression and bladder cancer risk
  2. Fu, Y. P.; Kohaar, I.; Rothman, N.; Earl, J.; Figueroa, J. D.; Ye, Y.; Malats, N.; Tang, W.; Liu, L.; Garcia-Closas, M.; Muchmore, B.; Chatterjee, N.; Tarway, M.; Kogevinas, M.; Porter-Gill, P.; Baris, D.; Mumy, A.; Albanes, D.; Purdue, M. P.; Hutchinson, A.; Carrato, A.; Tardon, A.; Serra, C.; Garcia-Closas, R.; Lloreta, J.; Johnson, A.; Schwenn, M.; Karagas, M. R.; Schned, A.; Diver, W. R.; Gapstur, S. M.; Thun, M. J.; Virtamo, J.; Chanock, S. J.; Fraumeni, J. F.; Silverman, D. T.; Wu, X. F.; Real, F. X.; Prokunina-Olsson, L.
  3. Proceedings of the National Academy of Sciences of the United States of America. 2012, Mar; 109(13): 4974-4979.
  1. 7.   Gene-specific transcription activation via long-range allosteric shape-shifting
  2. Tsai, C. J.; Nussinov, R.
  3. Biochemical Journal. 2011, Oct; 439: 15-25.
  1. 8.   Overexpression of enhancer of zeste homolog 2 with trimethylation of lysine 27 on histone H3 in adult T-cell leukemia/lymphoma as a target for epigenetic therapy
  2. Sasaki, D.; Imaizumi, Y.; Hasegawa, H.; Osaka, A.; Tsukasaki, K.; Choi, Y. L.; Mano, H.; Marquez, V. E.; Hayashi, T.; Yanagihara, K.; Moriwaki, Y.; Miyazaki, Y.; Kamihira, S.; Yamada, Y.
  3. Haematologica-the Hematology Journal. 2011, May; 96(5): 712-719.
  1. 9.   Regulation of Mouse Small Heat Shock Protein alpha b-Crystallin Gene by Aryl Hydrocarbon Receptor
  2. Liu, S. A. L. S. A.; Piatigorsky, J.
  3. Plos One. 2011, Apr; 6(4): 11.
  1. 10.   Development of thyroid gland and ultimobranchial body cyst is independent of p63
  2. Ozaki, T.; Nagashima, K.; Kusakabe, T.; Kakudo, K.; Kimura, S.
  3. Laboratory Investigation. 2011, Jan; 91(1): 138-146.
  1. 11.   The Structural Complexity of the Human BORIS Gene in Gametogenesis and Cancer
  2. Pugacheva, E. M.; Suzuki, T.; Pack, S. D.; Kosaka-Suzuki, N.; Yoon, J.; Vostrov, A. A.; Barsov, E.; Strunnikov, A. V.; Morse, H. C.; Loukinov, D.; Lobanenkov, V.
  3. Plos One. 2010, Nov 8; 5(11): e13872.
  1. 12.   Rapid global structure determination of large RNA and RNA complexes using NMR and small-angle X-ray scattering
  2. Wang, Y. X.; Zuo, X. B.; Wang, J. B.; Yu, P.; Butcher, S. E.
  3. Methods. 2010, Oct; 52(2): 180-191.
  1. 13.   Wnt2/2b and beta-Catenin Signaling Are Necessary and Sufficient to Specify Lung Progenitors in the Foregut
  2. Goss, A. M.; Tian, Y.; Tsukiyama, T.; Cohen, E. D.; Zhou, D.; Lu, M. M.; Yamaguchi, T. P.; Morrisey, E. E.
  3. Developmental Cell. 2009 17(2): 290-298.
  1. 14.   Functional Redundancy of Exon 12 of BRCA2 Revealed by a Comprehensive Analysis of the c.6853A > G (p.I2285V) Variant
  2. Li, L. L.; Biswas, K.; Habib, L. A.; Kuznetsov, S. G.; Hamel, N.; Kirchhoff, T.; Wong, N.; Armel, S.; Chong, G.; Narod, S. A.; Claes, K.; Offit, K.; Robson, M. E.; Stauffer, S.; Sharan, S. K.; Foulkes, W. D.
  3. Human Mutation. 2009 30(11): 1543-1550.
  1. 15.   Mutations that alter the equilibrium between open and closed conformations of Escherichia coli maltose-binding protein impede its ability to enhance the solubility of passenger proteins
  2. Nallamsetty, S.; Waugh, D. S.
  3. Biochemical and Biophysical Research Communications. 2007, Dec; 364(3): 639-644.
  1. 16.   Integrative genornics analysis reveals silencing of beta-adrenergic signaling by polycomb in prostate cancer
  2. Yu, J.; Cao, Q.; Mehra, R.; Laxman, B.; Yu, J.; Tomlins, S. A.; Creighton, C. J.; Dhanasekaran, S. M.; Shen, R.; Chen, G.; Morris, D. S.; Marquez, V. E.; Shah, R. B.; Ghosh, D.; Varambally, S.; Chinnaiyan, A. M.
  3. Cancer Cell. 2007, Nov; 12(5): 419-431.
  1. 17.   C/EBP beta serine 64, a phosphoacceptor site, has a critical role in LPS-induced IL-6 and MCP-1 transcription
  2. Spooner, C. J.; Sebastian, T.; Shuman, J. D.; Durairaj, S.; Guo, X. R.; Johnson, P. F.; Schwartz, R. C.
  3. Cytokine. 2007, Feb; 37(2): 119-127.
  1. 18.   C/EBP beta is a critical mediator of steroid hormone-regulated cell proliferation and differentiation in the uterine epithelium and stroma
  2. Mantena, S. R.; Kannan, A.; Cheon, Y. P.; Li, Q. X.; Johnson, P. F.; Bagchi, I. C.; Bagchi, M. K.
  3. Proceedings of the National Academy of Sciences of the United States of America. 2006, FEB 7; 103(6): 1870-1875.
  1. 19.   Conditional ablation of C/EBP beta demonstrates its keratinocyte-specific requirement for cell survival and mouse skin tumorigenesis
  2. Sterneck, E.; Zhu, S.; Ramirez, A.; Jorcano, J. L.; Smart, R. C.
  3. Oncogene. 2006, Feb; 25(8): 1272-1276.
  1. 20.   Solubility-enhancing proteins MBP and NusA play a passive role in the folding of their fusion partners
  2. Nallamsetty, S.; Waugh, D. S.
  3. Protein Expression and Purification. 2006, JAN; 45(1): 175-182.
  1. 21.   Gateway vectors for the production of combinatorially-tagged His(6)-MBP fusion proteins in the cytoplasm and periplasm of Escherichia Coli
  2. Nallamsetty, S.; Austin, B. P.; Penrose, K. J.; Waugh, D. S.
  3. Protein Science. 2005, DEC; 14(12): 2964-2971.
  1. 22.   Effect of posttranscriptional regulatory elements on transgene expression and virus production in the context of retrovirus vectors
  2. Hlavaty, J.; Schittmayer, M.; Stracke, A.; Jandl, G.; Knapp, E.; Felber, B. K.; Salmons, B.; Gunzburg, W. H.; Renner, M.
  3. Virology. 2005, OCT 10; 341(1): 1-11.
  1. 23.   Mouse cathelin-related antimicrobial peptide chemoattracts leukocytes using formyl peptide receptor-like 1/mouse formyl peptide receptor-like 2 as the receptor and acts as immune adjuvant
  2. Kurosaka, K.; Chen, Q.; Yarovinsky, F.; Oppenheim, J. J.; Yang, D.
  3. Journal of Immunology. 2005, MAY 15; 174(10): 6257-6265.
  1. 24.   Novel tumor necrosis factor-knockout mice that lack Peyer's patches
  2. Kuprash, D. V.; Tumanov, A. V.; Liepinsh, D. J.; Koroleva, E. P.; Drutskaya, M. S.; Kruglov, A. A.; Shakhov, A. N.; Southon, E.; Murphy, W. J.; Tessarollo, L.; Grivennikov, S. L.; Nedospasov, S. A.
  3. European Journal of Immunology. 2005, MAY; 35(5): 1592-1600.
  1. 25.   Repression of the inhibin alpha-subunit gene by the transcription factor CCAAT/enhancer-binding protein-beta
  2. Burkart, A. D.; Mukherjee, A.; Sterneck, E.; Johnson, P. F.; Mayo, K. E.
  3. Endocrinology. 2005, APR; 146(4): 1909-1921.
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