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  1. 1.   A permissive secondary structure-guided superposition tool for clustering of protein fragments toward protein structure prediction via fragment assembly
  2. Wainreb, G.; Haspel, N.; Wolfson, H. J.; Nussinov, R.
  3. Bioinformatics. 2006, Jun; 22(11): 1343-1352.
  1. 2.   The stability of monomeric intermediates controls amyloid formation: A beta 25-35 and its N27Q mutant
  2. Ma, B. Y.; Nussinov, R.
  3. Biophysical Journal. 2006, May; 90(10): 3365-3374.
  1. 3.   Interactions between immunoglobulin-like and catalytic modules in Clostridium thermocellum cellulosomal cellobiohydrolase CbhA
  2. Kataeva, I. A.; Uversky, V. N.; Brewer, J. M.; Schubot, F.; Rose, J. P.; Wang, B. C.; Ljungdahl, L. G.
  3. Protein Engineering Design & Selection. 2004, NOV; 17(11): 759-769.
  1. 4.   The role of the cyclic peptide backbone in the anti-HIV activity of the cyclotide kalata B1
  2. Daly, N. L.; Gustafson, K. R.; Craik, D. J.
  3. Febs Letters. 2004, SEP 10; 574(1-3): 69-72.
  1. 5.   Thermal unfolding molecular dynamics simulation of Escherichia coli dihydrofolate reductase: Thermal stability of protein domains and unfolding pathway
  2. Sham, Y. Y.; Ma, B. Y.; Tsai, C. J.; Nussinov, R.
  3. Proteins-Structure Function and Genetics. 2002 46(3): 308-320.
  1. 6.   RNA folding pathway functional intermediates: Their prediction and analysis
  2. Shapiro, B. A.; Bengali, D.; Kasprzak, W.; Wu, J. C.
  3. Journal of Molecular Biology. 2001 312(1): 27-44.
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