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  1. 1.   Circulating cell-free Nucleic Acid Detection for W. bancrofti infections
  2. Salazar, Marisa; Schaughency,Paul; Nutman, Thomas B; Bennuru, Sasisekhar
  3. The Journal of Infectious Diseases. 2025, Mar 17;
  1. 2.   Effects of Xylanase A double mutation on substrate specificity and structural dynamics
  2. MacDonald, Meagan E; Wells, Nicholas G M; Hassan,Bakar; Dudley, Joshua A; Walters,Kylie; Korzhnev, Dmitry M; Aramini, James M; Smith, Colin A
  3. Journal of Structural Biology. 2024, Mar 02; 108082.
  1. 3.   The beneficial effects of commensal E. coli for colon epithelial cell recovery are related with Formyl peptide receptor 2 (Fpr2) in epithelial cells
  2. Chen,Keqiang; McCulloch, John; Das Neves, Rodrigo; Roderigues, Gisele; Hsieh,Wang-Ting; Gong,Wang; Yoshimura,Teizo; Huang, Jiaqiang; O'hUigin, Colm; Difilippantonio,Simone; McCollum, Matthew; Jones, Georgette; Durum,Scott; Trinchieri, Giorgio; Wang, Ji Ming
  3. Gut Pathogens. 2023, Jun 15; 15(1): 28.
  1. 4.   A mutagenesis study of autoantigen optimization for potential T1D vaccine design
  2. Song, Yi; Bell,David; Ahmed, Rizwan; Chan, Kevin C; Lee, Sangyun; Hamad, Abdel Rahim A; Zhou, Ruhong
  3. Proceedings of the National Academy of Sciences of the United States of America. 2023, Apr 18; 120(16): e2214430120.
  1. 5.   An approach to rapid distributed manufacturing of broad spectrum anti-viral griffithsin using cell-free systems to mitigate pandemics
  2. Borhani, Shayan G; Levine, Max Z; Krumpe,Lauren; Wilson,Jennifer; Henrich,Curtis; O'Keefe,Barry; Lo, Donald C; Sittampalam, G Sitta; Godfrey, Alexander G; Lunsford, R Dwayne; Mangalampalli, Venkata; Tao, Dingyin; LeClair, Christopher A; Thole, Aaron P; Frey, Douglas; Swartz, James; Rao, Govind
  3. New Biotechnology. 2023, Apr 11; 76: 13-22.
  1. 6.   Computational investigation of natural compounds as potential main protease (Mpro) inhibitors for SARS-CoV-2 virus
  2. Patel,Chiragkumar; Jani, Siddhi P; Prasanth Kumar, Sivakumar; Modi, Krunal M; Kumar, Yogesh
  3. Computers in Biology and Medicine. 2022, Nov 18; 151(Pt A): 106318.
  1. 7.   A Workflow for High-pressure Freezing and Freeze Substitution of the Caenorhabditis elegans Embryo for Ultrastructural Analysis by Conventional and Volume Electron Microscopy
  2. Rahman, Mohammad M.; Chang, Irene Y.; Cohen-Fix, Orna; Narayan,Kedar
  3. Bio-Protocol. 2021, Apr 5; 11(7):
  1. 8.   Amyloid Oligomers: A Joint Experimental/Computational Perspective on Alzheimer's Disease, Parkinson's Disease, Type II Diabetes, and Amyotrophic Lateral Sclerosis
  2. Nguyen, Phuong H.; Ramamoorthy, Ayyalusamy; Sahoo, Bikash R.; Zheng, Jie; Faller, Peter; Straub, John E.; Dominguez, Laura; Shea, Joan-Emma; Dokholyan, Nikolay; De Simone, Alfonso; Ma, Buyong; Nussinov,Ruth; Najafi, Saeed; Ngo, Son Tung; Loquet, Antoine; Chiricotto, Mara; Ganguly, Pritam; McCarty, James; Li, Mai Suan; Hall, Carol; Wang, Yiming; Miller, Yifat; Melchionna, Simone; Habenstein, Birgit; Timr, Stepan; Chen, Jiaxing; Hnath, Brianna; Strodel, Birgit; Kayed, Rakez; Lesne, Sylvain; Wei, Guanghong; Sterpone, Fabio; Doig, Andrew J.; Derreumaux, Philippe
  3. Chemical Reviews. 2021, Feb 24; 121(4): 2545-2647.
  1. 9.   Conventional Co-Housing Modulates Murine Gut Microbiota and Hematopoietic Gene Expression
  2. Chen, Jichun; Zhang, Shuling; Feng, Xingmin; Wu, Zhijie; Dubois, Wendy; Thovarai,Vishal; Ahluwalia, Sonia; Gao, Shouguo; Chen, Jinguo; Peat, Tyler; Sen,Shurjo; Trinchieri, Giorgio; Young, Neal S; Mock, Beverly A
  3. International journal of molecular sciences. 2020, SEP; 21(17):
  1. 10.   Autoinhibition can identify rare driver mutations and advise pharmacology
  2. Nussinov,Ruth; Tsai,Chung-Jung; Jang,Hyunbum
  3. FASEB journal : official publication of the Federation of American Societies for Experimental Biology. 2020, Jan; 34(1): 16-29.
  1. 11.   Co-crystal structure of the iMango-III fluorescent RNA aptamer using an X-ray free-electron laser
  2. Trachman, Robert J; Stagno,Jason; Conrad, Chelsie; Jones, Christopher P; Fischer, Pontus; Meents, Alke; Wang, Yun Xing; Ferré-D'Amaré, Adrian R
  3. Acta crystallographica. Section F, Structural biology communications. 2019, Aug 01; 75(Pt 8): 547-551.
  1. 12.   Co-crystal structure of the Fusobacterium ulcerans ZTP riboswitch using an X-ray free-electron laser
  2. Jones, Christopher; Tran, Brandon; Conrad, Chelsie; Stagno,Jason; Trachman, Robert; Fischer, Pontus; Meents, Alke; Ferre-D'Amare, Adrian
  3. ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS. 2019, Jul; 75(Part 7): 496-500.
  1. 13.   Computational Structural Biology: Successes, Future Directions, and Challenges
  2. Nussinov, Ruth; Tsai, Chung-Jung; Shehu, Amarda; Jang, Hyunbum
  3. Molecules (Basel, Switzerland). 2019, Feb 1; 24(3):
  1. 14.   Label-Free Time-Gated Luminescent Detection Method for the Nucleotides with Varying Phosphate Content
  2. Kopra, Kari; Seppala, Tanja; Rabara, Dana; Abreu Blanco, Maria; Kulmala, Sakari; Holderfield, Matthew; Harma, Harri
  3. Sensors (Basel, Switzerland). 2018, Nov; 18(11):
  1. 15.   IonStar enables high-precision, low-missing-data proteomics quantification in large biological cohorts
  2. Shen, Xiaomeng; Shen, Shichen; Li, Jun; Hu, Qiang; Nie, Lei; Tu, Chengjian; Wang, Xue; Poulsen, David J; Orsburn, Ben; Wang, Jianmin; Qu, Jun
  3. Proceedings of the National Academy of Sciences of the United States of America. 2018, May 22; 115(21): E4767-E4776.
  1. 16.   Identification of novel simian endogenous retroviruses that are indistinguishable from simian retrovirus (SRV) on current SRV diagnostic assays
  2. Grant, Richard; Keele, Brandon; Kuller, LaRene; Watanabe, Robin; Perret, Alex; Smedley, Jeremy
  3. Journal of Medical Primatology. 2017, Aug; 46(4): 158-161.
  1. 17.   Crystal structure of CO-bound cytochrome c oxidase determined by serial femtosecond X-ray crystallography at room temperature
  2. Ishigami, Izumi; Zatsepin, Nadia A.; Hikita, Masahide; Conrad, Chelsie E.; Nelson, Garrett; Coe, Jesse D.; Basu, Shibom; Grant, Thomas D.; Seaberg, Matthew H.; Sierra, Raymond G.; Hunter, Mark S.; Fromme, Petra; Fromme, Raimund; Yeh, Syun-Ru; Rousseau, Denis L.
  3. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2017, Jul 25; 114(30): 8011-8016.
  1. 18.   NOS2 as an Emergent Player in Progression of Cancer
  2. Thomas, Douglas D.; Wink, David
  3. Antioxidants & Redox Signaling. 2017, Jun 10; 26(17): 963-965.
  1. 19.   Structure of the yeast U2/U6 snRNA complex
  2. Burke, J. E.; Sashital, D. G.; Zuo, X. B.; Wang, Y. X.; Butcher, S. E.
  3. Rna-a Publication of the Rna Society. 2012, Apr; 18(4): 673-683.
  1. 20.   Preclinical therapeutic response of residual metastatic disease is distinct from its primary tumor of origin
  2. Day, C. P.; Carter, J.; Bonomi, C.; Hollingshead, M.; Merlino, G.
  3. International Journal of Cancer. 2012, Jan; 130(1): 190-199.
  1. 21.   PATHOLOGIC LESIONS IN CHIMPANZEES (PAN TROGYLODYTES SCHWEINFURTHII) FROM GOMBE NATIONAL PARK, TANZANIA, 2004-2010
  2. Terio, K. A.; Kinsel, M. J.; Raphael, J.; Mlengeya, T.; Lipende, I.; Kirchhoff, C. A.; Gilagiza, B.; Wilson, M. L.; Kamenya, S.; Estes, J. D.; Keele, B. F.; Rudicell, R. S.; Liu, W. M.; Patton, S.; Collins, A.; Hahn, B. H.; Travis, D. A.; Lonsdorf, E. V.
  3. Journal of Zoo and Wildlife Medicine. 2011, Dec; 42(4): 597-607.
  1. 22.   Application of a water-soluble pyridyl disulfide amine linker for use in Cu-free click bioconjugation
  2. Thomas, J. D.; Burke, T. R.
  3. Tetrahedron Letters. 2011, Aug; 52(33): 4316-4319.
  1. 23.   Software and resources for computational medicinal chemistry
  2. Liao, C. Z.; Sitzmann, M.; Pugliese, A.; Nicklaus, M. C.
  3. Future Medicinal Chemistry. 2011, Jun; 3(8): 1057-1085.
  1. 24.   Effect of nitric oxide on neointimal hyperplasia based on sex and hormone status
  2. Hogg, M. E.; Varu, V. N.; Vavra, A. K.; Popowich, D. A.; Banerjee, M. N.; Martinez, J.; Jiang, Q.; Saavedra, J. E.; Keefer, L. K.; Kibbe, M. R.
  3. Free Radical Biology and Medicine. 2011, May; 50(9): 1065-1074.
  1. 25.   Magnetic resonance imaging of organic contrast agents in mice: capturing the whole-body redox landscape
  2. Davis, R. M.; Matsumoto, S.; Bernardo, M.; Sowers, A.; Matsumoto, K. I.; Krishna, M. C.; Mitchell, J. B.
  3. Free Radical Biology and Medicine. 2011, Feb; 50(3): 459-468.
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