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  1. 1.   Protein ensembles link genotype to phenotype
  2. Nussinov,Ruth; Tsai,Chung-Jung; Jang,Hyunbum
  3. PLoS computational biology. 2019, Jun; 15(6):
  1. 2.   Induced fit, conformational selection and independent dynamic segments: an extended view of binding events
  2. Csermely, P.; Palotai, R.; Nussinov, R.
  3. Trends in Biochemical Sciences. 2010, Oct; 35(10): 539-546.
  1. 3.   Why Does Binding of Proteins to DNA or Proteins to Proteins Not Necessarily Spell Function?
  2. Ma, B. Y.; Tsai, C. J.; Pan, Y. P.; Nussinov, R.
  3. Acs Chemical Biology. 2010, Mar; 5(3): 265-272.
  1. 4.   Mechanisms of transcription factor selectivity
  2. Pan, Y. P.; Tsai, C. J.; Ma, B. Y.; Nussinov, R.
  3. Trends in Genetics. 2010, Feb; 26(2): 75-83.
  1. 5.   Preferred drifting along the DNA major groove and cooperative anchoring of the p53 core domain: mechanisms and scenarios
  2. Pan, Y. P.; Nussinov, R.
  3. Journal of Molecular Recognition. 2010, Mar-Apr; 23(2): 232-240.
  1. 6.   The role of dynamic conformational ensembles in biomolecular recognition
  2. Boehr, D. D.; Nussinov, R.; Wright, P. E.
  3. Nature Chemical Biology. 2009 5(11): 789-796.
  1. 7.   The Mechanism of Ubiquitination in the Cullin-RING E3 Ligase Machinery: Conformational Control of Substrate Orientation
  2. Liu, J.; Nussinov, R.
  3. Plos Computational Biology. 2009 5(10):
  1. 8.   Cooperativity Dominates the Genomic Organization of p53-Response Elements: A Mechanistic View
  2. Pan, Y. P.; Nussinov, R.
  3. Plos Computational Biology. 2009 5(7):
  1. 9.   A permissive secondary structure-guided superposition tool for clustering of protein fragments toward protein structure prediction via fragment assembly
  2. Wainreb, G.; Haspel, N.; Wolfson, H. J.; Nussinov, R.
  3. Bioinformatics. 2006, Jun; 22(11): 1343-1352.
  1. 10.   Fluctuations in ion pairs and their stabilities in proteins
  2. Kumar, S.; Nussinov, R.
  3. Proteins-Structure Function and Genetics. 2001 43(4): 433-454.
  1. 11.   Transient, highly populated, building blocks folding model
  2. Tsai, C. J.; Nussinov, R.
  3. Cell Biochemistry and Biophysics. 2001 34(2): 209-235.
  1. 12.   Protein flexibility and electrostatic interactions
  2. Kumar, S.; Wolfson, H. J.; Nussinov, R.
  3. IBM Journal of Research and Development. 2001 45(3-4): 499-512.
  1. 13.   Interdomain interactions in hinge-bending transitions
  2. Sinha, N.; Kumar, S.; Nussinov, R.
  3. Structure. 2001 9(12): 1165-1181.
  1. 14.   Protein folding: Binding of conformationally fluctuating building blocks via population selection
  2. Tsai, C. J.; Ma, B. Y.; Kumar, S.; Wolfson, H.; Nussinov, R.
  3. Critical Reviews in Biochemistry and Molecular Biology. 2001 36(5): 399-433.
  1. 15.   Structured disorder and conformational selection
  2. Tsai, C. J.; Ma, B. Y.; Sham, Y. Y.; Kumar, S.; Nussinov, R.
  3. Proteins-Structure Function and Genetics. 2001 44(4): 418-427.
  1. 16.   Fluctuations between stabilizing and destabilizing electrostatic contributions of ion pairs in conformers of the c-Myc-Max leucine zipper
  2. Kumar, S.; Nussinov, R.
  3. Proteins-Structure Function and Genetics. 2000 41(4): 485-497.
  1. 17.   Binding and folding: in search of intramolecular chaperone-like building block fragments
  2. Ma, B. Y.; Tsai, C. J.; Nussinov, R.
  3. Protein Engineering. 2000 13(9): 617-627.
  1. 18.   Conservation of polar residues as hot spots at protein interfaces
  2. Hu, Z. J.; Ma, B. Y.; Wolfson, H.; Nussinov, R.
  3. Proteins: Structure, Function, & Genetics. 2000 39(4): 331-342.
  1. 19.   Transition-state ensemble in enzyme catalysis: Possibility, reality, or necessity?
  2. Ma, B. Y.; Kumar, S.; Tsai, C. J.; Hu, Z. J.; Nussinov, R.
  3. Journal of Theoretical Biology. 2000 203(4): 383-397.
  1. 20.   Folding and binding cascades: Dynamic landscapes and population shifts
  2. Kumar, S.; Ma, B. Y.; Tsai, C. J.; Sinha, N.; Nussinov, R.
  3. Protein Science. 2000 9(1): 10-19.
  1. 21.   Distinguishing between sequential and nonsequentially folded proteins: Implications for folding and misfolding
  2. Tsai, C. J.; Maizel, J. V.; Nussinov, R.
  3. Protein Science. 1999 8(8): 1591-1604.
  1. 22.   Folding funnels, binding funnels, and protein function
  2. Tsai, C. J.; Kumar, S.; Ma, B. Y.; Nussinov, R.
  3. Protein Science. 1999 8(6): 1181-1190.
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