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  1. 1.   Lineage and ecology define liver tumor evolution in response to treatment
  2. Revsine, Mahler; Wang, Limin; Forgues, Marshonna; Behrens, Shay; Craig, Amanda J; Liu, Meng; Tran,Bao; Kelly,Michael; Budhu, Anuradha; Monge, Cecilia; Xie, Changqing; Hernandez, Jonathan M; Greten, Tim F; Wang, Xin Wei; Ma, Lichun
  3. Cell Reports. Medicine. 2024, Feb 20; 5(2): 101394.
  1. 2.   A proteomic atlas of glypican-3 interacting partners: Identification of alpha-fetoprotein and other extracellular proteins as potential immunotherapy targets in liver cancer
  2. Zhang, Yi-Fan; Lin, Shaoli; Zhen, Xiao; Ho, Mitchell
  3. Proteoglycan Research. 2024, Oct-Dec; 2(4):
  1. 3.   Genome-wide profiling of transcription factor activity in primary liver cancer using single-cell ATAC sequencing
  2. Craig, Amanda J; Silveira, Maruhen A Datsch; Ma, Lichun; Revsine, Mahler; Wang, Limin; Heinrich, Sophia; Rae, Zachary; Ruchinskas, Allison; Dadkhah,Kimia; Do, Whitney; Behrens, Shay; Mehrabadi, Farid R; Dominguez, Dana A; Forgues, Marshonna; Budhu, Anuradha; Chaisaingmongkol, Jittiporn; Hernandez, Jonathan M; Davis, Jeremy L; Tran,Bao; Marquardt, Jens U; Ruchirawat, Mathuros; Kelly, Michael; Greten, Tim F; Wang, Xin W
  3. Cell Reports. 2023, Nov 17; 42(11): 113446.
  1. 4.   Tumor biology and immune infiltration define primary liver cancer subsets linked to overall survival after immunotherapy
  2. Budhu, Anuradha; Pehrsson,Erica; He, Aiwu; Goyal, Lipika; Kelley, Robin Kate; Dang, Hien; Xie, Changqing; Monge, Cecilia; Tandon, Mayank; Ma, Lichun; Revsine, Mahler; Kuhlman, Laura; Zhang, Karen; Baiev, Islam; Lamm, Ryan; Patel, Keyur; Kleiner, David E; Hewitt, Stephen M; Tran,Bao; Shetty,Jyoti; Wu,Xiaolin; Zhao,Yongmei; Shen,Tsai-Wei; Choudhari,Sulbha; Kriga,Yuliya; Ylaya, Kris; Warner,Andrew; Edmondson,Elijah; Forgues, Marshonna; Greten, Tim F; Wang, Xin Wei
  3. Cell Reports. Medicine. 2023, May 16; 4(6): 101052.
  1. 5.   Biomarkers of gut barrier dysfunction and risk of hepatocellular carcinoma in the REVEAL-HBV and REVEAL-HCV Cohort Studies
  2. Petrick, Jessica L; Florio, Andrea A; Zen, Jane; Wang, Yanyu; Gewirtz, Andrew T; Pfeiffer, Ruth M; Loftus,Sarah; Inglefield,Jon; Koshiol, Jill; Yang, Baiyu; Yu, Kelly; Hildesheim, Allan; Chen, Chien-Jen; Yang, Hwai-I; Lee, Mei-Hsuan; McGlynn, Katherine A
  3. International Journal of Cancer. 2023, Mar 06;
  1. 6.   Context-Dependent Function of Long Noncoding RNA PURPL in Transcriptome Regulation during p53 Activation
  2. Hartford, Corrine Corrina R; Shrestha, Roshan L; Pongor, Lorinc; Zhao,Yongmei; Chen, Xiongfong; Fromont,Caroline; Chaudhary, Ritu; Li, Xiao Ling; Pasterczyk, Katherine R; Kumar, Ravi; Muys, Bruna R; Tsitsipatis, Dimitrios; Chari,Raj; Gorospe, Myriam; Aladjem, Mirit I; Khan, Javed; Basrai, Munira A; Grammatikakis, Ioannis; Lal, Ashish
  3. Molecular and Cellular Biology. 2022, Nov 07; 42(12): e0028922.
  1. 7.   CpG Site-Specific Methylation-Modulated Divergent Expression of PRSS3 Transcript Variants Facilitates Nongenetic Intratumor Heterogeneity in Human Hepatocellular Carcinoma
  2. Lin, Shuye; Xu, Hanli; Pang, Mengdi; Zhou, Xiaomeng; Pan, Yuanming; Zhang, Lishu; Guan, Xin; Wang, Xiaoyue; Lin, Bonan; Tian, Rongmeng; Chen,Keqiang; Zhang, Xiaochen; Yang, Zijiang; Ji, Fengmin; Huang, Yingying; Wei, Wu; Gong,Wang; Ren, Jianke; Wang,Jiming; Guo, Mingzhou; Huang, Jiaqiang
  3. Frontiers in Oncology. 2022, Apr 11; 12: 831268.
  1. 8.   Single-cell atlas of tumor cell evolution in response to therapy in hepatocellular carcinoma and intrahepatic cholangiocarcinoma
  2. Ma, Lichun; Wang, Limin; Khatib, Subreen A; Chang, Ching-Wen; Heinrich, Sophia; Dominguez, Dana A; Forgues, Marshonna; Candia, Julián; Hernandez,Maria; Kelly,Michael; Zhao,Yongmei; Tran,Bao; Hernandez, Jonathan M; Davis, Jeremy L; Kleiner, David E; Wood, Bradford J; Greten, Tim F; Wang, Xin Wei
  3. Journal of Hepatology. 2021, Dec; 75(6): 1397-1408.
  1. 9.   Integration of adeno-associated virus (AAV) into the genomes of most Thai and Mongolian liver cancer patients does not induce oncogenesis
  2. Schaffer, Alejandro A.; Dominguez, Dana A.; Chapman, Lesley M.; Gertz, E. Michael; Budhu, Anuradha; Forgues, Marshonna; Chaisaingmongkol, Jittiporn; Rabibhadana, Siritida; Pupacdi, Benjarath; Wu,Xiaolin; Bayarsaikhan, Enkhjargal; Harris, Curtis C.; Ruchirawat, Mathuros; Ruppin, Eytan; Wang, Xin Wei
  3. BMC GENOMICS. 2021, Nov 11; 22(1):
  1. 10.   Tumor aggressiveness is independent of radiation quality in murine hepatocellular carcinoma and mammary tumor models
  2. Udho, Eshwar B.; Huebner, Shane M.; Albrecht, Dawn M.; Matkowskyj, Kristina A.; Clipson, Linda; Hedican, Catigan A.; Koth, Rachel; Snow, Santina M.; Eberhardt, Emily L.; Miller, Devon; Van Doorn, Rachel; Gjyzeli, Genti; Spengler, Erin K.; Storts, Douglas R.; Thamm, Douglas H.; Edmondson,Elijah; Weil, Michael M.; Halberg, Richard B.; Bacher, Jeffery W.
  3. International Journal of Radiation Biology. 2021, Mar 31; 97(8): 1140-1151.
  1. 11.   PAIP 2019: Liver cancer segmentation challenge
  2. Kim, Yoo Jung; Jang, Hyungjoon; Lee, Kyoungbun; Park, Seongkeun; Min, Sung-Gyu; Hong, Choyeon; Park, Jeong Hwan; Lee, Kanggeun; Kim, Jisoo; Hong, Wonjae; Jung,Hyun; Liu,Yanling; Rajkumar, Haran; Khened, Mahendra; Krishnamurthi, Ganapathy; Yang, Sen; Wang, Xiyue; Han, Chang Hee; Kwak, Jin Tae; Ma, Jianqiang; Tang, Zhe; Marami, Bahram; Zeineh, Jack; Zhao, Zixu; Heng, Pheng-Ann; Schmitz, Rüdiger; Madesta, Frederic; Rösch, Thomas; Werner, Rene; Tian, Jie; Puybareau, Elodie; Bovio, Matteo; Zhang, Xiufeng; Zhu, Yifeng; Chun, Se Young; Jeong, Won-Ki; Park, Peom; Choi, Jinwook
  3. Medical Image Analysis. 2021, Jan; 67: 101854.
  1. 12.   Tumor Cell Biodiversity Drives Microenvironmental Reprogramming in Liver Cancer
  2. Ma, Lichun; Hernandez,Maria; Zhao,Yongmei; Mehta,Monika; Tran,Bao; Kelly,Michael; Rae,Zachary; Hernandez, Jonathan M; Davis, Jeremy L; Martin, Sean P; Kleiner, David E; Hewitt, Stephen M; Ylaya, Kris; Wood, Bradford J; Greten, Tim F; Wang, Xin Wei
  3. Cancer cell. 2019, Oct 14; 36(4): 418-430.
  1. 13.   A frizzled-like cysteine rich domain in glypican-3 mediates Wnt binding and regulates hepatocellular carcinoma tumor growth in mice
  2. Li, Na; Wei, Liwen; Liu, Xiaoyu; Bai, Hongjun; Ye, Yvonne; Li, Dan; Li, Nan; Baxa,Ulrich; Wang, Qun; Lv, Ling; Chen, Yun; Feng, Mingqian; Lee, Byungkook; Gao, Wei; Ho, Mitchell
  3. Hepatology (Baltimore, Md.). 2019, OCT; 70(4): 1231-1245.
  1. 14.   Common Molecular Subtypes Among Asian Hepatocellular Carcinoma and Cholangiocarcinoma
  2. Chaisaingmongkol, Jittiporn; Budhu, Anuradha; Dang, Hien; Rabibhadana, Siritida; Pupacdi, Benjarath; Kwon, So Mee; Forgues, Marshonna; Pomyen, Yotsawat; Bhudhisawasdi, Vajarabhongsa; Lertprasertsuke, Nirush; Chotirosniramit, Anon; Pairojkul, Chawalit; Auewarakul, Chirayu U; Sricharunrat, Thaniya; Phornphutkul, Kannika; Sangrajrang, Suleeporn; Cam, Maggie; He, Ping; Hewitt, Stephen M; Ylaya, Kris; Wu, Xiaolin; Andersen, Jesper B; Thorgeirsson, Snorri S; Waterfall, Joshua J; Zhu, Yuelin J; Walling, Jennifer; Stevenson, Holly S; Edelman, Daniel; Meltzer, Paul S; Loffredo, Christopher A; Hama, Natsuko; Shibata, Tatsuhiro; Wiltrout, Robert H; Harris, Curtis C; Mahidol, Chulabhorn; Ruchirawat, Mathuros; Wang, Xin W
  3. Cancer Cell. 2017, Jul 10; 32(1): 57-70.
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