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  1. 1.   The human oral microbiome and risk of colorectal cancer within three prospective cohort studies in the United States
  2. Vogtmann, Emily; Yano, Yukiko; Zouiouich, Semi; Hua,Xing; Wan, Yunhu; Purandare, Vaishnavi; Li, Shilan; Dagnall,Casey; Jones, Kristine; Hicks,Belynda; Hutchinson,Amy; Caporaso, J Gregory; Wheeler, William; Huang, Wen-Yi; Freedman, Neal D; Sandler, Dale P; Beane Freeman, Laura E; Liao, Linda M; Gail, Mitchell H; Shi, Jianxin; Abnet, Christian C; Sinha, Rashmi
  3. Cancer. 2025, Mar 15; 131(6): e35802.
  1. 2.   The integrated stress response regulates 18S nonfunctional rRNA decay in mammals
  2. Coria,Aaztli; Shah,Akruti; Shafieinouri,Mohammad; Taylor, Sarah J; Orgebin,Emilien; Guiblet,Wilfried; Miller,Jennifer; Sharma, Indra Mani; Wu, Colin Chih-Chien
  3. Molecular Cell. 2025, Feb 07;
  1. 3.   NusG-Dependent RNA Polymerase Pausing and Tylosin-Dependent Ribosome Stalling Are Required for Tylosin Resistance by Inducing 23S rRNA Methylation in Bacillus subtilis
  2. Yakhnin, Helen; Yakhnin, Alexander V; Mouery, Brandon L; Mandell, Zachary F; Karbasiafshar, Catherine; Kashlev,Mikhail; Babitzke, Paul
  3. mBio. 2019, Nov; 10(6): pii: e02665-19..
  1. 4.   RNA-Protein Interactions Prevent Long RNA Duplex Formation: Implications for the Design of RNA-Based Therapeutics
  2. Bindewald, Eckart; Dai, Lisheng; Kasprzak, Wojciech; Kim, Taejin; Gu, Shuo; Shapiro, Bruce
  3. MOLECULES. 2018, Dec; 23(12):
  1. 5.   Altered fecal microbiota composition in all male aggressor-exposed rodent model simulating features of post-traumatic stress disorder
  2. Gautam, Aarti; Kumar, Raina; Chakraborty, Nabarun; Muhie, Seid; Hoke, Allison; Hammamieh, Rasha; Jett, Marti
  3. Journal of neuroscience research. 2018, Apr 06;
  1. 6.   Longitudinal profiling reveals a persistent intestinal dysbiosis triggered by conventional anti-tuberculosis therapy.
  2. Namasivayam, Sivaranjani; Maiga, Mamoudou; Yuan, Wuxing; Thovarai, Vishal; Costa, Diego L; Mittereder, Lara R; Wipperman, Matthew F; Glickman, Michael S; Dzutsev, Amiran; Trinchieri, Giorgio; Sher, Alan
  3. Microbiome. 2017, Jul 07; 5(1): 71.
  1. 7.   Growth rate regulation in Escherichia coli
  2. Jin, D. J.; Cagliero, C.; Zhou, Y. N.
  3. FEMS Microbiology Reviews. 2012, Mar; 36(2): 269-287.
  1. 8.   Stabilization of ribozyme-like cis-noncoding rRNAs induces apoptotic and nonapoptotic death in lung cells
  2. Gee, M.; Gu, Y.; Fields, J. R.; Shiao, Y. H.
  3. Cell Death & Disease. 2012, Mar; 3
  1. 9.   Non-coding rRNA-mediated preferential killing in cancer cells is enhanced by suppression of autophagy in non-transformed counterpart
  2. Hwang, C. J.; Fields, J. R.; Shiao, Y. H.
  3. Cell Death & Disease. 2011, Dec; 2
  1. 10.   Importance of the 5 S rRNA-binding ribosomal proteins for cell viability and translation in Escherichia coli
  2. Korepanov, A. P.; Gongadze, G. M.; Garber, M. B.; Court, D. L.; Bubunenko, M. G.
  3. Journal of Molecular Biology. 2007, Mar; 366(4): 1199-1208.
  1. 11.   Coupling the distribution of RNA polymerase to global gene regulation and the dynamic structure of the bacterial nucleoid in Escherichia coli
  2. Jin, D. J.; Cabrera, J. E.
  3. Journal of Structural Biology. 2006, Nov; 156(2): 284-291.
  1. 12.   Allele-specific germ cell epimutation in the spacer promoter of the 45S ribosomal RNA gene after Cr(III) exposure
  2. Shiao, Y. H.; Crawford, E. B.; Anderson, L. M.; Patel, P.; Ko, K.
  3. Toxicology and Applied Pharmacology. 2005, JUN 15; 205(3): 290-296.
  1. 13.   Mycoplasma testudineum sp nov., from a desert tortoise (Gopherus agassizii) with upper respiratory tract disease
  2. Brown, D. R.; Merritt, J. L.; Jacobson, E. R.; Klein, P. A.; Tully, J. G.; Brown, M. B.
  3. International Journal of Systematic and Evolutionary Microbiology. 2004, SEP; 54(Part 5): 1527-1529.
  1. 14.   A comparison between elastic network interpolation and MD simulation of 16S ribosomal RNA
  2. Kim, M. K.; Li, W.; Shapiro, B. A.; Chirikjian, G. S.
  3. Journal of Biomolecular Structure & Dynamics. 2003 21(3): 395-405.
  1. 15.   Re-evaluation of the classical Mycoplasma lipophilum cluster (Weisburg et al. 1989) and description of two new clusters in the hominis group based on 16S rDNA sequences
  2. Pettersson, B.; Tully, J. G.; Bolske, G.; Johansson, K. E.
  3. International Journal of Systematic and Evolutionary Microbiology. 2001 51(Pt. 2): 633-643.
  1. 16.   Proposal to transfer some members of the genera Haemobartonella and Eperythrozoon to the genus Mycoplasma with descriptions of 'Candidatus Mycoplasma haemofelis', 'Candidatus Mycoplasma haemomuris', 'Candidatus Mycoplasma haemosuis' and 'Candidatus Mycoplasma wenyonii'
  2. Neimark, H.; Johansson, K. E.; Rikihisa, Y.; Tully, J. G.
  3. International Journal of Systematic and Evolutionary Microbiology. 2001 51: 891-899.
  1. 17.   Updated phylogenetic description of the Mycoplasma hominis cluster (Weisburg et al. 1989) based on 16S rDNA sequences
  2. Pettersson, B.; Tully, J. G.; Bolske, G.; Johansson, K. E.
  3. International Journal of Systematic and Evolutionary Microbiology. 2000 50(Part 1): 291-301.
  1. 18.   Mycoplasma cavipharyngis and Mycoplasma fastidiosum, the closest relatives to Eperythrozoon spp. and Haemobartonella spp
  2. Johansson, K. E.; Tully, J. G.; Bolske, G.; Pettersson, B.
  3. FEMS Microbiology Letters. 1999 174(2): 321-326.
  1. 19.   Phylogenetic Reconstruction of the Felidae Using 16s Rrna and Nadh-5 Mitochondrial Genes
  2. Johnson, W. E.; Obrien, S. J.
  3. Journal of Molecular Evolution. 1997 44(Suppl 1): S 98-S 116.
  1. 20.   Chemical Modification of CRISPR gRNAs Eliminate type I Interferon Responses in Human Peripheral Blood Mononuclear Cells
  2. Schubert, Mollie S; Cedrone, Edward; Neun, Barry; Behlke, Mark A; Dobrovolskaia, Marina
  3. Journal of cytokine biology. 2018 3(1): pii: 121.
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