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  1. 1.   Predicting Volume of Distribution in Humans: Performance of in silico Methods for A Large Set of Structurally Diverse Clinical Compounds
  2. Murad, Neha; Pasikanti, Kishore K; Madej,Benjamin; Minnich, Amanda; McComas, Juliet M; Crouch, Sabrinia; Polli, Joseph W; Weber, Andrew D
  3. Drug metabolism and disposition: the biological fate of chemicals. 2021, Feb 1; 49: 169-178.
  1. 2.   The utility of asymmetric flow field-flow fractionation for preclinical characterization of nanomedicines
  2. Hu,Yingwen; Crist,Rachael; Clogston,Jeffrey
  3. Analytical and bioanalytical chemistry. 2019, Nov 27;
  1. 3.   Neutrophilic Granule Protein Is a Novel Murine LPS Antagonist
  2. Hong,Jaewoo; Qu,Peng; Wuest, Todd R; Huang, Haishan; Huang, Chuanshu; Lin,Charles
  3. Immune network. 2019, Oct; 19(5): e34.
  1. 4.   Conformational energy range of ligands in protein crystal structures: The difficult quest for accurate understanding
  2. Peach, Megan; Cachau, Raul; Nicklaus, Marc
  3. JOURNAL OF MOLECULAR RECOGNITION. 2017, Aug; 30(8):
  1. 5.   Englerin A Inhibits EWS-FLI1 DNA Binding in Ewing Sarcoma Cells
  2. Caropreso, V.; Darvishi, E.; Turbyville, T. J.; Ratnayake, R.; Grohar, P. J.; McMahon, J. B.; Woldemichael, G. M.
  3. The Journal of biological chemistry. 2016, 6-May; 291(19): 10058-66.
  1. 6.   Farnesylated and methylated KRAS4b: high yield production of protein suitable for biophysical studies of prenylated protein-lipid interactions
  2. Gillette, W. K.; Esposito, D.; Abreu Blanco, M.; Alexander, P.; Bindu, L.; Bittner, C.; Chertov, O.; Frank, P. H.; Grose, C.; Jones, J. E.; Meng, Z.; Perkins, S.; Van, Q.; Ghirlando, R.; Fivash, M.; Nissley, D. V.; McCormick, F.; Holderfield, M.; Stephen, A. G.
  3. Scientific Reports. 2015 5: 15916.
  1. 7.   HIV-1 and HIV-2 Vif interact with human APOBEC3 proteins using completely different determinants
  2. Smith, J. L.; Izumi, T.; Borbet, T. C.; Hagedorn, A. N.; Pathak, V. K.
  3. Journal of Virology. 2014, 1-Sep; 88(17): 9893-908.
  1. 8.   Structure of a eukaryotic RNase III postcleavage complex reveals a double-ruler mechanism for substrate selection
  2. Liang, Y. H.; Lavoie, M.; Comeau, M. A.; Abou Elela, S.; Ji, X.
  3. Molecular Cell. 2014, 8-May; 54(3): 431-44.
  1. 9.   Multiple conformational selection and induced fit events take place in allosteric propagation
  2. Nussinov, R.; Ma, B.; Tsai, C. J.
  3. Biophysical Chemistry. 2014, Feb; 186: 22-30.
  1. 10.   Crystal structures of beta-1,4-galactosyltransferase 7 enzyme reveal conformational changes and substrate binding
  2. Tsutsui, Y.; Ramakrishnan, B.; Qasba, P. K.
  3. Journal of Biological Chemistry. 2013, 1-Nov; 288(44): 31963-70.
  1. 11.   Structure of the Taz2 domain of p300: insights into ligand binding
  2. Miller, M.; Dauter, Z.; Cherry, S.; Tropea, J. E.; Wlodawer, A.
  3. Acta crystallographica. Section D, Biological crystallography. 2009, Dec; 65(Pt 12): 1301-8.
  1. 12.   Protein-protein interaction networks: how can a hub protein bind so many different partners?
  2. Tsai, C. J.; Ma, B.; Nussinov, R.
  3. Trends in Biochemical Sciences. 2009, Dec; 34(12): 594-600.
  1. 13.   Lsh participates in DNA methylation and silencing of stem cell genes
  2. Xi, S.; Geiman, T. M.; Briones, V.; Guang Tao, Y.; Xu, H.; Muegge, K.
  3. Stem Cells. 2009, Nov; 27(11): 2691-702.
  1. 14.   Signaling dynamics of the KSR1 scaffold complex
  2. McKay, M. M.; Ritt, D. A.; Morrison, D. K.
  3. Proceedings of the National Academy of Sciences of the United States of America. 2009, Jul 7; 106(27): 11022-7.
  1. 15.   Identification and characterization of fully human anti-CD22 monoclonal antibodies
  2. Xiao, X.; Ho, M.; Zhu, Z.; Pastan, I.; Dimitrov, D. S.
  3. Mabs. 2009, May-Jun; 1(3): 297-303.
  1. 16.   Interaction of colloidal gold nanoparticles with human blood: effects on particle size and analysis of plasma protein binding profiles
  2. Dobrovolskaia, M. A.; Patri, A. K.; Zheng, J. W.; Clogston, J. D.; Ayub, N.; Aggarwal, P.; Neun, B. W.; Hall, J. B.; McNeil, S. E.
  3. Nanomedicine-Nanotechnology Biology and Medicine. 2009 5(2): 106-117.
  1. 17.   Methods for the analysis of HIV-1 nucleocapsid protein interactions with oligonucleotides
  2. Stephen, A. G.; Fisher, R. J.
  3. Methods in molecular biology (Clifton, N.J.). 2009 485: 209-221.
  1. 18.   Allosteric effects in the marginally stable von Hippel-Lindau tumor suppressor protein and allostery-based rescue mutant design
  2. Liu, J.; Nussinov, R.
  3. Proceedings of the National Academy of Sciences of the United States of America. 2008 105(3): 901-906.
  1. 19.   The impact of dyskeratosis congenita mutations on the structure and dynamics of the human telomerase RNA pseudoknot domain
  2. Yingling, Y. G.; Shapiro, B. A.
  3. Journal of Biomolecular Structure & Dynamics. 2007, Feb; 24(4): 303-319.
  1. 20.   Trp/Met/Phe hot spots in protein-protein interactions: Potential targets in drug design
  2. Ma, B.; Nussinov, R.
  3. Current Topics in Medicinal Chemistry. 2007 7(10): 999-1005.
  1. 21.   Combinatorial docking approach for structure prediction of large proteins and multi-molecular assemblies
  2. Inbar, Y.; Benyamini, H.; Nussinov, R.; Wolfson, H. J.
  3. Physical Biology. 2005, DEC; 2(4, Sp. Iss.): S156-S165.
  1. 22.   Crystal structure of the N-terminal domain of E-coli Lon protease
  2. Li, M.; Rasulova, F.; Melnikov, E. E.; Rotanova, T. V.; Gustchina, A.; Maurizi, M. R.; Wlodawer, A.
  3. Protein Science. 2005, NOV; 14(11): 2895-2900.
  1. 23.   Protein-protein interactions: organization, cooperativity and mapping in a bottom-up Systems Biology approach
  2. Keskin, O.; Ma, B. Y.; Rogale, K.; Gunasekaran, K.; Nussinov, R.
  3. Physical Biology. 2005, JUN; 2(2): S24-S35.
  1. 24.   How similar are protein folding and protein binding nuclei? Examination of vibrational motions of energy hot spots and conserved residues
  2. Haliloglu, T.; Keskin, O.; Ma, B. Y.; Nussinov, R.
  3. Biophysical Journal. 2005, MAR; 88(3): 1552-1559.
  1. 25.   Favorable scaffolds: proteins with different sequence, structure and function may associate in similar ways
  2. Keskin, O.; Nussinov, R.
  3. Protein Engineering Design & Selection. 2005, JAN; 18(1): 11-24.
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