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  1. 1.   Two hearts beat as one: the debate over RAS dimers continues
  2. Stephen,Andy
  3. Trends in Biochemical Sciences. 2024, Nov; 49(11): 933-935.
  1. 2.   RAS Nanoclusters: Dynamic Signaling Platforms Amenable to Therapeutic Intervention
  2. Van,Que; Prakash, Priyanka; Shrestha,Rebika; Balius,Trent; Turbyville,Tommy; Stephen,Andy
  3. Biomolecules. 2021, Mar 3; 11(3):
  1. 3.   The KRAS and other prenylated polybasic domain membrane anchors recognize phosphatidylserine acyl chain structure
  2. Zhou, Yong; Prakash, Priyanka S.; Liang, Hong; Gorfe, Alemayehu A.; Hancock, John F.
  3. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2021, Feb 9; 118(6):
  1. 4.   The quaternary assembly of KRas4B with Raf-1 at the membrane
  2. Jang,Hyunbum; Zhang,Mingzhen; Nussinov,Ruth
  3. Computational and Structural Biotechnology Journal. 2020, Mar 25; 18: 737-748.
  1. 5.   Serum Vascular Endothelial Growth Factor-D Prospectively Distinguishes Lymphangioleiomyomatosis From Other Diseases
  2. Young, L. R.; VanDyke, R.; Gulleman, P. M.; Inoue, Y.; Brown, K. K.; Schmidt, L. S.; Linehan, W. M.; Hajjar, F.; Kinder, B. W.; Trapnell, B. C.; Bissler, J. J.; Franz, D. N.; McCormack, F. X.
  3. Chest. 2010, Sep; 138(3): 674-681.
  1. 6.   Stem cells as a therapeutic target for diabetes
  2. Mishra, P. K.; Singh, S. R.; Joshua, I. G.; Tyagi, S. C.
  3. Frontiers in Bioscience-Landmark. 2010, Jan; 15: 461-477.
  1. 7.   A systematic multireference perturbation-theory study of the low-lying states of SiC3
  2. Rintelman, J. M.; Gordon, M. S.; Fletcher, G. D.; Ivanic, J.
  3. Journal of Chemical Physics. 2006, JAN 21; 124(3, Art. No. 034303):
  1. 8.   WholePathwayScope: a comprehensive pathway-based analysis tool for high-throughput data
  2. Yi, M.; Horton, J. D.; Cohen, J. C.; Hobbs, H. H.; Stephens, R. M.
  3. Bmc Bioinformatics. 2006, JAN 19; 7
  1. 9.   Comparative analysis of tandem T7-like promoter containing regions in enterobacterial genomes reveals a novel group of genetic islands
  2. Chen, Z. H.; Schneider, T. D.
  3. Nucleic Acids Research. 2006 34(4): 1133-1147.
  1. 10.   Region-specific saturation germline mutagenesis in mice using the Sleeping Beauty transposon system
  2. Keng, V. W.; Yae, K.; Hayakawa, T.; Mizuno, S.; Uno, Y.; Yusa, K.; Kokubu, C.; Kinoshita, T.; Akagi, K.; Jenkins, N. A.; Copeland, N. G.; Horie, K.; Takeda, J.
  3. Nature Methods. 2005, OCT; 2(10): 763-769.
  1. 11.   Allele-specific germ cell epimutation in the spacer promoter of the 45S ribosomal RNA gene after Cr(III) exposure
  2. Shiao, Y. H.; Crawford, E. B.; Anderson, L. M.; Patel, P.; Ko, K.
  3. Toxicology and Applied Pharmacology. 2005, JUN 15; 205(3): 290-296.
  1. 12.   The contribution of the Trp/Met/Phe residues to physical interactions of p53 with cellular proteins
  2. Ma, B. Y.; Pan, Y. P.; Gunasekaran, K.; Keskin, O.; Venkataraghavan, R. B.; Levine, A. J.; Nussinov, R.
  3. Physical Biology. 2005, JUN; 2(2): S56-S66.
  1. 13.   Qualitative assessment Of IC50 values of inhibitors of the neuronal nicotinic acetylcholine receptor using a single chromatographic experiment and multivariate cluster analysis
  2. Jozwiak, K.; Moaddel, R.; Yamaguchi, R.; Ravichandran, S.; Collins, J. R.; Wainer, I. W
  3. Journal of Chromatography B-Analytical Technologies in the Biomedical and Life Sciences. 2005, MAY 5; 819(1): 169-174.
  1. 14.   Crystal structure of a SeqA-N filament: implications for DNA replication and chromosome organization
  2. Guarne, A.; Brendler, T.; Zhao, Q. H.; Ghirlando, R.; Austin, S.; Yang, W.
  3. Embo Journal. 2005, APR 20; 24(8): 1502-1511.
  1. 15.   Favorable scaffolds: proteins with different sequence, structure and function may associate in similar ways
  2. Keskin, O.; Nussinov, R.
  3. Protein Engineering Design & Selection. 2005, JAN; 18(1): 11-24.
  1. 16.   MAPPIS: Multiple 3D alignment of protein-protein interfaces
  2. Shulman-Peleg, A.; Shatsky, M.; Nussinov, R.; Wolfson, H. J.
  3. Computational Life Sciences. 2005; 3695 : 91-103.
  1. 17.   Long-range ordering in water-halide ion interactions: A database study
  2. Prabakaran, P.; Singarayan, M. G.
  3. Chemistry Letters. 2004, DEC 5; 33(12): 1640-1641.
  1. 18.   Global analysis of the cortical neuron proteome
  2. Yu, L. R.; Conrads, T. P.; Uo, T.; Kinoshita, Y.; Morrison, R. S.; Lucas, D. A.; Chan, K. C.; Blonder, J.; Issaq, H. J.; Veenstra, T. D.
  3. Molecular & Cellular Proteomics. 2004, SEP; 3(9): 896-907.
  1. 19.   A new, structurally nonredundant, diverse data set of protein-protein interfaces and its implications
  2. Keskin, O.; Tsai, C. J.; Wolfson, H.; Nussinov, R.
  3. Protein Science. 2004 13(4): 1043-1055.
  1. 20.   The application of the effective fragment potential method to molecular anion solvation: A study of ten oxyanion-water clusters, A(-)(H2O)(1-4)
  2. Merrill, G. N.; Webb, S. P.
  3. Journal of Physical Chemistry A. 2004 108(5): 833-839.
  1. 21.   QM/MM modeling of the glutathione-hydroxymethyl radical reaction in watery
  2. Nemukhin, A. V.; Grigorenko, B. L.; Topol, I. A.; Burt, S. K.
  3. Physical Chemistry Chemical Physics. 2004 6(5): 1031-1038.
  1. 22.   PubMatrix: a tool for multiplex literature mining
  2. Becker, K. G.; Hosack, D. A.; Dennis, G.; Lempicki, R. A.; Bright, T. J.; Cheadle, C.; Engel, J.
  3. Bmc Bioinformatics. 2003 4: art-61.
  1. 23.   Localization of the Drosophila MAGUK protein Polychaetoid is controlled by alternative splicing
  2. Wei, X. R.; Ellis, H. M.
  3. Mechanisms of Development. 2001 100(2): 217-231.
  1. 24.   Nitric oxide induces metallothionein (MT) gene expression apparently by displacing zinc bound to MIT
  2. Katakai, K.; Liu, J.; Nakajima, K.; Keefer, L. K.; Waalkes, M. P.
  3. Toxicology Letters. 2001 119(2): 103-108.
  1. 25.   Concertedness and solvent effects in multiple proton transfer reactions: The formic acid dimer in solution
  2. Kohanoff, J.; Koval, S.; Estrin, D. A.; Laria, D.; Abashkin, Y.
  3. Journal of Chemical Physics. 2000 112(21): 9498-9508.
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