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  1. 1.   HIV-1 Transcription Inhibition Using Small RNA-Binding Molecules
  2. Khatkar, Pooja; Mensah, Gifty; Ning, Shangbo; Cowen, Maria; Kim, Yuriy; Williams, Anastasia; Abulwerdi, Fardokht A; Zhao, Yunjie; Zeng, Chen; Le Grice, Stuart F J; Kashanchi, Fatah
  3. Pharmaceuticals (Basel, Switzerland). 2023, Dec 25; 17(1):
  1. 2.   A Zpr1 co-chaperone mediates folding of eukaryotic translation elongation factor 1A via a GTPase cycle
  2. McQuown, Alexander J; Nelliat, Anjali R; Reif, Dvir; Sabbarini, Ibrahim M; Membreno, Britnie Santiago; Wu,Colin; Denic, Vladimir
  3. Molecular Cell. 2023, Aug 16; 81(17): 3108-3122.
  1. 3.   Zinc-finger protein Zpr1 is a bespoke chaperone essential for eEF1A biogenesis
  2. Sabbarini, Ibrahim M; Reif, Dvir; McQuown, Alexander J; Nelliat, Anjali R; Prince, Jeffrey; Santiago Membreno,Britnie; Wu,Colin; Murray, Andrew W; Denic, Vladimir
  3. Molecular Cell. 2023, Jan 19; 83(2): 252-265.
  1. 4.   Structural Studies Reveal the Role of Helix 68 in the Elongation Step of Protein Biosynthesis
  2. Cimicata, Giuseppe; Fridkin, Gil; Bose, Tanaya; Eyal, Zohar; Halfon, Yehuda; Breiner-Goldstein, Elinor; Fox,Tara; Zimmerman, Ella; Bashan, Anat; de Val, Natalia; Wlodawer,Alexander; Yonath, Ada
  3. mBio. 2022, Mar 29; 13(2): e0030622.
  1. 5.   High-Resolution Ribosome Profiling for Determining Ribosome Functional States During Translation Elongation
  2. Shafieinouri,Mohammad; Santiago Membreno,Britnie; Wu,Colin
  3. Methods in Molecular Biology (Clifton, N.J.). 2022 2428: 173-186.
  1. 6.   Dynamic imaging of nascent RNA reveals general principles of transcription dynamics and stochastic splice site selection
  2. Wan, Yihan; Anastasakis, Dimitrios G.; Rodriguez, Joseph; Palangat, Murali; Gudla, Prabhakar; Zaki,George; Tandon,Mayank; Pegoraro, Gianluca; Chow, Carson C.; Hafner, Markus; Larson, Daniel R.
  3. CELL. 2021, May 27; 184(11): 2878-2895.e20.
  1. 7.   4EHP and GIGYF1/2 Mediate Translation-Coupled Messenger RNA Decay
  2. Weber, Ramona; Chung, Min-Yi; Keskeny, Csilla; Zinnall, Ulrike; Landthaler, Markus; Valkov,Eugene; Izaurralde, Elisa; Igreja, Catie
  3. CELL REPORTS. 2020, OCT 13; 33(2):
  1. 8.   With Age Comes Maturity: Biochemical and Structural Transformation of a Human Centriole in the Making
  2. Sullenberger,Catherine; Vasquez Limeta,Alejandra; Kong,Dong; Loncarek,Jadranka
  3. Cells. 2020, JUN; 9(6):
  1. 9.   Production and characterization of a highly pure RNA polymerase holoenzyme from Mycobacterium tuberculosis
  2. Herrera-Asmat, Omar; Lubkowska, Lucyna; Kashlev, Mikhail; Bustamante, Carlos J; Guerra, Daniel G; Kireeva, Maria
  3. Protein Expression and Purification. 2017, Jun; 134: 1-10.
  1. 10.   A Wnt5 Activity Asymmetry and Intercellular Signaling via PCP Proteins Polarize Node ells for Left-Right Symmetry Breaking
  2. Minegishi, Katsura; Hashimoto, Masakazu; Ajima, Rieko; Takaoka, Katsuyoshi; Shinohara, Kyosuke; Ikawa, Yayoi; Nishimura, Hiromi; McMahon, Andrew P.; Willert, Karl; Okada, Yasushi; Sasaki, Hiroshi; Shi, Dongbo; Fujimori, Toshihiko; Ohtsuka, Toshihisa; Igarashl, Yasunobu; Yamaguchi, Terry; Shimono, Akihiko; Shiratori, Hidetaka; Hamada, Hiroshi
  3. DEVELOPMENTAL CELL. 2017, Mar 13; 40(5): 439-452.
  1. 11.   High-throughput single-molecule screen for small-molecule perturbation of splicing and transcription kinetics
  2. Day, C. R.; Chen, H.; Coulon, A.; Meier, J. L.; Larson, D. R.
  3. Methods (San Diego, Calif.). 2016, 1-Mar; 96: 59-68.
  1. 12.   A tumor suppressor function of Smurf2 associated with controlling chromatin landscape and genome stability through RNF20
  2. Blank, M.; Tang, Y.; Yamashita, M.; Burkett, S. S.; Cheng, S. Y.; Zhang, Y. E.
  3. Nature Medicine. 2012, Feb; 18(2): 227-234.
  1. 13.   The elongation rate of RNA polymerase determines the fate of transcribed nucleosomes
  2. Bintu, L.; Kopaczynska, M.; Hodges, C.; Lubkowska, L.; Kashlev, M.; Bustamante, C.
  3. Nature Structural & Molecular Biology. 2011, Dec; 18(12): 1394-U112.
  1. 14.   Treatment of breast cancer cells with DNA demethylating agents leads to a release of Pol II stalling at genes with DNA-hypermethylated regions upstream of TSS
  2. Tao, Y. G.; Liu, S.; Briones, V.; Geiman, T. M.; Muegge, K.
  3. Nucleic Acids Research. 2011, Dec; 39(22): 9508-9520.
  1. 15.   NusA Interaction with the alpha Subunit of E-coil RNA Polymerase Is via the UP Element Site and Releases Autoinhibition
  2. Schweimer, K.; Prasch, S.; Sujatha, P. S.; Bubunenko, M.; Gottesman, M. E.; Rosch, P.
  3. Structure. 2011, Jul; 19(7): 945-954.
  1. 16.   Developmental Biology: Extending the Limb and Body with Vectors and Scalars
  2. Lewandoski, M.; Mackem, S.
  3. Current Biology. 2011, Jan; 21(1): R34-R36.
  1. 17.   Conformational coupling, bridge helix dynamics and active site dehydration in catalysis by RNA polymerase
  2. Seibold, S. A.; Singh, B. N.; Zhang, C. F.; Kireeva, M.; Domecq, C.; Bouchard, A.; Nazione, A. M.; Feig, M.; Cukier, R. I.; Coulombe, B.; Kashlev, M.; Hampsey, M.; Burton, Z. F.
  3. Biochimica Et Biophysica Acta-Gene Regulatory Mechanisms. 2010, Aug; 1799(8): 575-587.
  1. 18.   Synergistic action of RNA polymerases in overcoming the nucleosomal barrier
  2. Jin, J.; Bai, L.; Johnson, D. S.; Fulbright, R. M.; Kireeva, M. L.; Kashlev, M.; Wang, M. D.
  3. Nature Structural & Molecular Biology. 2010, Jun; 17(6): 745-U122.
  1. 19.   Lsh Mediated RNA Polymerase II Stalling at HoxC6 and HoxC8 Involves DNA Methylation
  2. Tao, Y. G.; Xi, S. C.; Briones, V.; Muegge, K.
  3. Plos One. 2010, Feb; 5(2): e9163.
  1. 20.   Sequences required for transcription termination at the intrinsic lambda tI terminator
  2. Martinez-Trujillo, M.; Sanchez-Trujillo, A.; Ceja, V.; Avila-Moreno, F.; Bermudez-Cruz, R. M.; Court, D.; Montanez, C.
  3. Canadian Journal of Microbiology. 2010, Feb; 56(2): 168-177.
  1. 21.   Translocation by multi-subunit RNA polymerases
  2. Kireeva, M.; Kashlev, M.; Burton, Z. F.
  3. Biochimica Et Biophysica Acta-Gene Regulatory Mechanisms. 2010, May-Jun; 1799(5-6): 389-401.
  1. 22.   Wnt5a is essential for intestinal elongation in mice
  2. Cervantes, S.; Yamaguchi, T. P.; Hebrok, M.
  3. Developmental Biology. 2009 326(2): 285-294.
  1. 23.   Nucleosomal Fluctuations Govern the Transcription Dynamics of RNA Polymerase II
  2. Hodges, C.; Bintu, L.; Lubkowska, L.; Kashlev, M.; Bustamante, C.
  3. Science. 2009 325(5940): 626-628.
  1. 24.   Mechanism of sequence-specific pausing of bacterial RNA polymerase
  2. Kireeva, M. L.; Kashlev, M.
  3. Proceedings of the National Academy of Sciences of the United States of America. 2009 106(22): 8900-8905.
  1. 25.   A beta-catenin gradient links the clock and wavefront systems in mouse embryo segmentation
  2. Aulehla, A.; Wiegraebe, W.; Baubet, V.; Wahl, M. B.; Deng, C. X.; Taketo, M.; Lewandoski, M.; Pourquie, O.
  3. Nature Cell Biology. 2008 10(2): 186-193.
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