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  1. 1.   How to recover from a bad start: adaptation of HIV-1 transcription start site mutants during serial passaging in culture
  2. Nikolaitchik,Olga; Chameettachal,Akhil; Islam,Mohammad Saiful; Keele,Brandon; Delviks-Frankenberry, Krista; Pathak,Vinay; Hu,Wei-Shau; Cheng,Zetao
  3. Journal of Virology. 2025, May 07; e0015925.
  1. 2.   Kaposi Sarcoma-Associated Herpesvirus Risk and Disease in Kidney Donors and Transplant Recipients with HIV in the United States
  2. Nambiar, Puja; Liang, Tao; Labo,Maria Nazzarena; Hand, Jonathan; Blumberg, Emily A; Rana, Meenakshi M; Florman, Sander; Haydel, Brandy; Morris, Michele I; Schaenman, Joanna; Rodrigues, Moreno M S; Werbel, William A; Bowring, Mary G; Friedman-Moraco, Rachel J; Stock, Peter; Stosor, Valentina; Mehta, Shikha; Gilbert, Alexander J; Elias, Nahel; Mehta, Sapna A; Small, Catherine B; Haidar, Ghady; Malinis, Maricar; Pereira, Marcus R; Aslam, Saima; Wojciechowski, David; La Hoz, Ricardo; Santos, Carlos A Q; Apewokin, Senu; Castillo-Lugo, Jose A; Ranganna, Karthik; Morsheimer, Megan; Massie, Allan; Segev, Dorry L; Miley,Wendell; Marshall,Vickie; Whitby,Denise; Tobian, Aaron A A; Durand, Christine M
  3. Clinical Infectious Diseases : an official publication of the Infectious Diseases Society of America. 2025, May 05;
  1. 3.   Widespread distribution of transcriptionally active, clonally expanded, HIV-1 proviruses despite suppressive antiretroviral therapy
  2. Imamichi, Hiromi; Natarajan,Venkatachala; Scrimieri,Francesca; Smith, Mindy; Badralmaa,Yunden; Bosche,Marjorie; Hensien, Jack M; Buerkert, Thomas; Sherman,Brad; Sherman, Brad T; Singh, Kanal; Lane, H Clifford
  3. The Journal of Clinical Investigation. 2025, Apr 22;
  1. 4.   Structural and mechanistic bases for resistance of the M66I capsid variant to lenacapavir
  2. Briganti, Lorenzo; Annamalai, Arun S; Bester, Stephanie M; Wei, Guochao; Andino-Moncada, Jonathan R; Singh, Satya P; Kleinpeter,Alexander; Tripathi, Meghna; Nguyen, Binh; Radhakrishnan, Rajalingam; Singh, Parmit K; Greenwood, Juliet; Schope, Lauren I; Haney, Reed; Huang, Szu-Wei; Freed, Eric O; Engelman, Alan N; Francis, Ashwanth C; Kvaratskhelia, Mamuka
  3. mBio. 2025, Apr 15; e0361324.
  1. 5.   A monomeric envelope glycoprotein cytoplasmic tail is sufficient for HIV-1 Gag lattice trapping and incorporation
  2. Groves, Nicholas S; Clark, Austin R; Aguilar, Rebekah S; Hikichi,Yuta; Kostenko, Anastasiia; Bruns, Merissa M; Aron, Alegra T; Freed,Eric; van Engelenburg, Schuyler B
  3. Journal of virology. 2025, Apr 15; e0210524.
  1. 6.   Elements in the 5' Untranslated Region of Viral RNA Important for HIV Gag Recognition and Cross-Packaging
  2. Cheng,Zetao; Nikolaitchik,Olga; Duchon,Alice; Rawson, Jonathan M O; Pathak,Vinay; Hu,Wei-Shau
  3. Viruses. 2025, Apr 10; 17(4): 551.
  1. 7.   Lenacapavir disrupts HIV-1 core integrity while stabilizing the capsid lattice
  2. Li,Chenglei; Burdick,Ryan; Siddiqui,Rokeya; Janaka, Sanath Kumar; Hsia,Ru-Ching; Hu, Wei-Shau; Pathak,Vinay
  3. Proceedings of the National Academy of Sciences of the United States of America. 2025, Apr 08; 122(14): e2420497122.
  1. 8.   Expression of HIV from a 1-LTR circular DNA in the absence of integration
  2. Gurgo, Corrado; Fenizia, Claudio; McKinnon, Katherine; Hsia,Ru-Ching; Franchini, Genoveffa
  3. Retrovirology. 2025, Mar 17; 22(1): 2.
  1. 9.   Antiretroviral Therapy within Two Years of HIV Acquisition is Associated with Fewer Viral Blips: A Retrospective Analysis of Over 20 Years of Data from the U.S. Military HIV Natural History Study
  2. Crowell, Trevor A; Hsieh, Hsing-Chuan; Wang, Xun; Chu, Xiuping; Gayle, Britt; Berjohn, Catherine M; Blaylock, Jason M; Yabes, Joseph M; Larson, Derek T; Powers,John; O'Connell, Robert J; Ganesan, Anuradha; Agan, Brian K
  3. Clinical Infectious Diseases : an official publication of the Infectious Diseases Society of America. 2025, Mar 10;
  1. 10.   Divergent populations of HIV-infected naïve and memory CD4+ T-cell clones in children on antiretroviral therapy
  2. Katusiime, Mary Grace; Neer,Victoria; Guo, Shuang; Patro,Sean; Wang,Wenjie; Luke,Brian; Capoferri,Adam; Wu,Xiaolin; Horner, Anna M; Rausch,Jason; Chahroudi, Ann; Mavigner, Maud; Kearney,Mary
  3. The Journal of Clinical Investigation. 2025, Mar 06;
  1. 11.   Virologic effects of broadly neutralizing antibodies VRC01LS and VRC07-523LS on chronic HIV-1 infection
  2. Happe, Myra; Lynch, Rebecca M; Fichtenbaum, Carl J; Heath, Sonya L; Koletar, Susan L; Landovitz, Raphael J; Presti, Rachel M; Santana-Bagur, Jorge L; Tressler, Randall L; Holman, LaSonji A; Novik, Laura; Roa, Jhoanna C; Rothwell, Ro Shauna; Strom, Larisa; Wang,Jing; Hu, Zonghui; Conan-Cibotti, Michelle; Bhatnagar, Anjali M; Dwyer, Bridget; Ko, Sung Hee; Belinky, Frida; Namboodiri, Aryan M; Pandey, Janardan P; Carroll, Robin; Basappa, Manjula; Serebryannyy, Leonid; Narpala, Sandeep R; Lin, Bob C; McDermott, Adrian B; Boritz, Eli A; Capparelli, Edmund V; Coates, Emily E; Koup, Richard A; Ledgerwood, Julie E; Mascola, John R; Chen, Grace L; Tebas, Pablo
  3. JCI Insight. 2025, Feb 24; 10(4):
  1. 12.   Isolation and structure elucidation of Dm-CVNH, a new cyanovirin-N homolog with activity against SARS-CoV-2 and HIV-1
  2. Orfanoudaki,Maria; Krumpe,Lauren; Shenoy, Shilpa R; Wilson,Jennifer; Guszczynski, Tad; Henrich,Curtis; Temme,Joel; Gildersleeve,Jeffrey; Molina-Molina, Elisa; Erkizia, Itziar; Blanco, Julià; Izquierdo-Useros, Nuria; Montiero, Fabio; Tanuri, Amilcar; Rech, Elibio; O'Keefe,Barry
  3. The Journal of Biological Chemistry. 2025, Feb 14; 108319.
  1. 13.   SIV monoclonal antibody administration spanning treatment interruption in macaques delays viral rebound and selects escape variants
  2. King, Hannah A D; Brammer, Daniel; Lewitus, Eric; Fennessey,Christine; Manalang, Kimberly M; Shrader, Hannah R; Andrew, Shayne; Kuri, Phillip; Lind, Matthew; Pham, Phuc; Sanders-Buell, Eric; Bai, Hongjun; Mason, Rosemarie; Song, Kaimei; McCarthy, Elizabeth; Helmold Hait, Sabrina; Todd, John-Paul; Pegu, Amarendra; Foulds, Kathryn E; Lifson,Jeffrey; Keele,Brandon; Rolland, Morgane; Roederer, Mario; Bolton, Diane L
  3. Proceedings of the National Academy of Sciences of the United States of America. 2025, Feb 04; 122(5): e2404767122.
  1. 14.   HIV-1 transcription start sites usage and its impact on unspliced RNA functions in people living with HIV
  2. Islam,Mohammad Saiful; Maldarelli,Frank; Nikolaitchik,Olga; Cheng,Zetao; Gorelick,Robert; Nikolaitchik, Maria A; Pathak,Vinay; Hu,Wei-Shau
  3. mBio. 2024, Dec 27; e0357624.
  1. 15.   Rapid systemic spread and minimal immune responses following SIVsab intrarectal transmission in African green monkeys
  2. Raehtz, Kevin D; Xu, Cuiling; Deleage,Claire; Ma, Dongzhu; Policicchio, Benjamin B; Brocca-Cofano, Egidio; Piccolo, Daniele; Weaver, Kathryn; Keele,Brandon; Estes, Jacob D; Apetrei, Cristian; Pandrea, Ivona
  3. JCI Insight. 2024, Dec 06; 9(23):
  1. 16.   Tissue-Specific DNA Methylation Changes in CD8+ T Cells During Chronic Simian Immunodeficiency Virus Infection of Infant Rhesus Macaques
  2. Nag,Mukta; Fogle, Jonathan E; Pillay, Santhoshan; Del Prete,Greg; De Paris, Kristina
  3. Viruses. 2024, Nov 27; 16(12):
  1. 17.   Potent and broad HIV-1 neutralization in fusion peptide-primed SHIV-infected macaques
  2. Wang, Hua; Cheng, Cheng; Dal Santo, James L; Shen, Chen-Hsiang; Bylund, Tatsiana; Henry, Amy R; Howe, Colin A; Hwang, Juyun; Morano, Nicholas C; Morris, Daniel J; Pletnev, Sergei; Roark, Ryan S; Zhou, Tongqing; Hansen, Bryan T; Hoyt, Forrest H; Johnston, Timothy S; Wang, Shuyi; Zhang, Baoshan; Ambrozak, David R; Becker, Jordan E; Bender, Michael F; Changela, Anita; Chaudhary, Ridhi; Corcoran, Martin; Corrigan, Angela R; Foulds, Kathryn E; Guo, Yicheng; Lee, Myungjin; Li, Yingying; Lin, Bob C; Liu, Tracy; Louder, Mark K; Mandolesi, Marco; Mason, Rosemarie D; McKee, Krisha; Nair, Vinod; O'Dell, Sijy; Olia, Adam S; Ou, Li; Pegu, Amarendra; Raju, Nagarajan; Rawi, Reda; Roberts-Torres, Jesmine; Sarfo, Edward K; Sastry, Mallika; Schaub, Andrew J; Schmidt, Stephen D; Schramm, Chaim A; Schwartz, Cindi L; Smith, Sarah C; Stephens,Tyler; Stuckey, Jonathan; Teng, I-Ting; Todd, John-Paul; Tsybovsky,Yaroslav; Van Wazer, David J; Wang, Shuishu; Doria-Rose, Nicole A; Fischer, Elizabeth R; Georgiev, Ivelin S; Karlsson Hedestam, Gunilla B; Sheng, Zizhang; Woodward, Ruth A; Douek, Daniel C; Koup, Richard A; Pierson, Theodore C; Shapiro, Lawrence; Shaw, George M; Mascola, John R; Kwong, Peter D
  3. Cell. 2024, Oct 23;
  1. 18.   Factors affecting Kaposi's sarcoma-associated herpesvirus transmission in rural Ugandan households, a longitudinal study
  2. Sabourin, Katherine R; Marshall, Vickie A; Eaton, Will; Kimono, Beatrice; Mugisha, Joseph; Miley, Wendell J; Labo, Nazzarena; Samayoa-Reyes, Gabriela; Whitby, Denise; Rochford, Rosemary; Newton, Robert
  3. Infectious Agents and Cancer. 2024, Oct 03; 19(1): 49.
  1. 19.   Kinetic Studies on the Interaction of HIV-1 Gag Protein with the HIV-1 RNA Packaging Signal
  2. Rink,Connie; Kroupa, Tomas; Rein,Alan; Datta,Siddhartha
  3. Viruses. 2024, Sep 25; 16(10): 1517.
  1. 20.   Translation of HIV-1 unspliced RNA is regulated by 5' untranslated region structure
  2. Cheng,Zetao; Islam,Mohammad Saiful; Kanlong, Joseph G; Sheppard, Madeline; Seo, Heewon; Nikolaitchik,Olga; Kearse, Michael G; Pathak,Vinay; Musier-Forsyth, Karin; Hu,Wei-Shau
  3. Journal of Virology. 2024, Sep 24; e0116024.
  1. 21.   HIV-1 control in vivo is related to the number but not the fraction of infected cells with viral unspliced RNA
  2. Capoferri,Adam; Wiegand,Ann; Hong, Feiyu; Jacobs, Jana L; Spindler,Jon; Musick,Andrew; Bale, Michael J; Shao, Wei; Sobolewski, Michele D; Cillo, Anthony R; Luke,Brian; Carmody,Christine; Gorelick,Robert; Hoh, Rebecca; Halvas, Elias K; Deeks, Steven G; Coffin, John M; Mellors, John W; Kearney,Mary
  3. Proceedings of the National Academy of Sciences of the United States of America. 2024, Sep 03; 121(36): e2405210121.
  1. 22.   Guanylate-binding protein 5 antagonizes viral glycoproteins independently of furin processing
  2. Veler,Hana; Lun, Cheng Man; Waheed,Abdul; Freed,Eric
  3. mBio. 2024, Aug 30; e0208624.
  1. 23.   PKR activation-induced mitochondrial dysfunction in HIV-transgenic mice with nephropathy
  2. Yoshida, Teruhiko; Latt, Khun Zaw; Rosenberg, Avi Z; Santo, Briana A; Myakala, Komuraiah; Ishimoto,Yu; Zhao, Yongmei; Shrivastav, Shashi; Jones, Bryce A; Yang, Xiaoping; Wang, Xiaoxin X; Tutino, Vincent M; Sarder, Pinaki; Levi, Moshe; Okamoto, Koji; Winkler, Cheryl A; Kopp, Jeffrey B
  3. eLife. 2024, Aug 29; 12
  1. 24.   Focusing HIV-1 Gag T-cell Responses to Highly Conserved Regions by DNA Vaccination in HVTN 119
  2. Kalams, Spyros A; Felber,Barbara; Mullins, James I; Scott, Hyman M; Allen, Mary A; De Rosa, Stephen C; Heptinstall, Jack; Tomaras, Georgia D; Hu, Jiani; deCamp, Allan C; Rosati,Margherita; Bear,Jenifer; Pensiero, Michael N; Eldridge, John; Egan, Michael A; Hannaman, Drew; McElrath, M Juliana; Pavlakis,George
  3. JCI Insight. 2024, Aug 01;
  1. 25.   Prediction of differential Gag versus Env responses to a mosaic HIV-1 vaccine regimen by HLA class I alleles
  2. Nelson,George; van Duijn, Janine; Yuki,Yuko; Pau, Maria G; Tomaka, Frank; Lavreys, Ludo; DeRosa, Steven C; McElrath, M Juliana; Kirk, Gregory D; Michael, Nelson L; Haas, David W; Deeks, Steven G; Wolinsky, Steven; Walker, Bruce; Barouch, Dan H; Stieh, Daniel; Carrington, Mary
  3. Journal of Virology. 2024, Jul 24; e0028124.
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