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  1. 1.   Acute infectious mononucleosis generates persistent, functional EBNA-1 antibodies with high cross-reactivity to alpha-crystalline beta
  2. Ganta, Krishna Kumar; McManus, Margaret; Blanc, Ross; Wang, Qixin; Jung, Wonyeong; Brody, Robin; Carrington,Mary; Paris, Robert; Chandramouli, Sumana; McNamara, Ryan P; Luzuriaga, Katherine
  3. Cell Reports. 2025, May 13; 44(5): 115709.
  1. 2.   Widespread distribution of transcriptionally active, clonally expanded, HIV-1 proviruses despite suppressive antiretroviral therapy
  2. Imamichi, Hiromi; Natarajan,Venkatachala; Scrimieri,Francesca; Smith, Mindy; Badralmaa,Yunden; Bosche,Marjorie; Hensien, Jack M; Buerkert, Thomas; Sherman,Brad; Sherman, Brad T; Singh, Kanal; Lane, H Clifford
  3. The Journal of Clinical Investigation. 2025, Apr 22;
  1. 3.   Harnessing molecular recognition for small molecule-mediated, reversible photochemical control over mRNA translation
  2. Parmar,Shaifaly; Tenney, Logan; Liang, Xiao; Routzahn,John; Sibley, Christopher D; Schneekloth,John
  3. Angewandte Chemie (International ed. in English). 2025, Mar 31; e202503078.
  1. 4.   Demographics, epidemiology, mortality and difficult-to-treat resistance patterns of bacterial bloodstream infections in the global US Military Health System from 2010 to 2019: a retrospective cohort study
  2. Vostal, Alexander C; Grance, Melissa; Powers,John; Kadri, Sameer S; Warner, Sarah; Chukwuma, Uzo; Morales, Carlos; Lanteri, Charlotte; Carson, M Leigh; Poitras, Beth; Seliga, Nicholas; Follmann, Dean; Wang,Jing; Parmelee, Edward; Mende, Katrin
  3. BMJ Open. 2025, Mar 03; 15(3): e094861.
  1. 5.   The differential interactomes of the KRAS splice variants identify BIRC6 as a ubiquitin ligase for KRAS4A
  2. Kochen Rossi, Juan; Nuevo-Tapioles, Cristina; O'Keefe, Rachel A; Hunkeler, Moritz; Schmoker, Anna M; Fissore-O'Leary, Mercedes; Su, Wenjuan; Ahearn, Ian M; Branco, Cristina; Cheong, Hakyung; Esposito,Dom; Clotea, Ioana; Ueberheide, Beatrix; Fischer, Eric S; Philips, Mark R
  3. Cell Reports. 2024, Dec 19; 44(1): 115087.
  1. 6.   Rab11-Rab8 cascade dynamics in primary cilia and membrane tubules
  2. Saha,Ipsita; Insinna, Christine; Westlake,Christopher
  3. Cell Reports. 2024, Nov 08; 43(11): 114955.
  1. 7.   Smyd3-mediated immuno-modulation in HPV-negative head and neck squamous cell carcinoma mouse models
  2. Tsai, Daniel E; Lovanov, Alexei; Abdelmaksoud, Abdalla; Akhtar, Jawad; Dar, Mohd Saleem; Luff, Marie; McKinnon, Katherine; Kim, Sohyoung; Robbins, Yvette; Huynh, Angel; Murali, Madhavi; Bernard, Benjamin; Sinkoe, Andrew; Luo, Xiaolin; Karim,Baktiar; Allen, Clint T; Saloura, Vassiliki
  3. iScience. 2024, Sep 20; 27(9): 110854.
  1. 8.   Bromodomain protein BRD4 directs mitotic cell division of mouse fibroblasts by inhibiting DNA damage
  2. Wu, Tiyun; Hou, Haitong; Dey, Anup; Bachu, Mahesh; Chen,Jack; Wisniewski, Jan; Kudoh, Fuki; Chen, Chao; Chauhan, Sakshi; Xiao, Hua; Pan, Richard; Ozato, Keiko
  3. iScience. 2024, Jul 19; 27(7): 109797.
  1. 9.   Protocol for cytoskeleton staining of the semi-adherent multiple myeloma cell line RPMI 8226 by immunofluorescence
  2. Osei Amponsa,Vasty; Magidson,Valentin; Walters,Kylie
  3. STAR Protocols. 2024, May 02; 5(2): 103060.
  1. 10.   Systematic characterization of multi-omics landscape between gut microbial metabolites and GPCRome in Alzheimer's disease
  2. Qiu, Yunguang; Hou, Yuan; Gohel, Dhruv; Zhou, Yadi; Xu, Jielin; Bykova, Marina; Yang, Yuxin; Leverenz, James B; Pieper, Andrew A; Nussinov,Ruth; Caldwell, Jessica Z K; Brown, J Mark; Cheng, Feixiong
  3. Cell Reports. 2024, Apr 21; 43(5): 114128.
  1. 11.   Attenuating ribosome load improves protein output from mRNA by limiting translation-dependent mRNA decay
  2. Bicknell, Alicia A; Reid, David W; Licata, Marissa C; Jones, Adriana K; Cheng, Yi Min; Li, Mengying; Hsiao, Chiaowen Joyce; Pepin, Christopher S; Metkar, Mihir; Levdansky,Yevgen; Fritz, Brian R; Andrianova, Elizaveta A; Jain, Ruchi; Valkov,Eugene; Köhrer, Caroline; Moore, Melissa J
  3. Cell Reports. 2024, Apr 15; 43(4): 114098.
  1. 12.   Modeling and Analysis of HIV-1 Pol Polyprotein as a Case Study for Predicting Large Polyprotein Structures
  2. Hao,Ming; Imamichi,Tomozumi; Chang,Weizhong
  3. International Journal of Molecular Sciences. 2024, Feb 02; 25(3):
  1. 13.   Age-associated changes in lineage composition of the enteric nervous system regulate gut health and disease
  2. Kulkarni, Subhash; Saha, Monalee; Slosberg, Jared; Singh, Alpana; Nagaraj, Sushma; Becker, Laren; Zhang, Chengxiu; Bukowski, Alicia; Wang, Zhuolun; Liu, Guosheng; Leser, Jenna M; Kumar, Mithra; Bakhshi, Shriya; Anderson,Matthew; Lewandoski,Mark; Vincent, Elizabeth; Goff, Loyal A; Pasricha, Pankaj Jay
  3. eLife. 2023, Dec 18; 12
  1. 14.   SARS-CoV-2 papain-like protease (PLpro) plays multiple roles in regulating cellular proteins in the endoplasmic reticulum
  2. Yang,Mei; Mariano,Jennifer; Su, Rebecca; Smith, Christopher E; Das,Sudipto; Gill, Catherine; Andresson,Thorkell; Loncarek,Jadranka; Tsai,Yien Che; Weissman,Allan
  3. The Journal of Biological Chemistry. 2023, Dec; 299(12): 105346.
  1. 15.   Sequencing-based functional assays for classification of BRCA2 variants in mouse ESCs
  2. Biswas,Kajal; Mitrophanov,Alex; Sahu,Sounak; Sullivan,Teresa; Southon,Eileen; Nousome,Darryl; Reid, Susan; Narula, Sakshi; Smolen, Julia; Sengupta, Trisha; Riedel-Topper, Maximilian; Kapoor, Medha; Babbar, Anav; Stauffer,Stacey; Cleveland, Linda; Tandon, Mayank; Malys,Tyler; Sharan,Shyam
  3. Cell Reports Methods. 2023, Nov 20; 3(11): 100628.
  1. 16.   Abundant binary promoter switches in lineage-determining transcription factors indicate a digital component of cell fate determination
  2. Li,Hongchuan; Rahman, Md Ahasanur; Ruesch, Michael; Eisele, Caprice D; Anderson,Erik; Wright,Paul; Cao, Jennie; Ratnayake, Shashikala; Chen, Qingrong; Yan, Chunhua; Meerzaman, Daoud; Abraham, Roshini S; Freud, Aharon G; Anderson,Steve
  3. Cell Reports. 2023, Nov 16; 42(11): 113454.
  1. 17.   Spatial Mechano-Signaling Regulation of GTPases through Non-Degradative Ubiquitination
  2. Sewduth, Raj N; Carai, Paolo; Ivanisevic, Tonci; Zhang, Mingzhen; Jang,Hyunbum; Lechat, Benoit; Van Haver, Delphi; Impens, Francis; Nussinov,Ruth; Jones, Elizabeth; Sablina, Anna
  3. Advanced Science (Weinheim, Baden-Wurttemberg, Germany). 2023, Nov 09; e2303367.
  1. 18.   Protocol for the saturation and multiplexing of genetic variants using CRISPR-Cas9
  2. Sahu,Sounak; Sullivan,Teresa; Southon,Eileen; Caylor,Dylan; Geh, Josephine; Sharan,Shyam
  3. STAR Protocols. 2023, Nov 08; 4(4): 102702.
  1. 19.   Detection of the DNA binding of transcription factors in situ at the single-cell resolution in cultured cells by proximity ligation assay
  2. Ram,Babul; Dai,Chengkai
  3. STAR Protocols. 2023, Nov 01; 4(4): 102692.
  1. 20.   AP-1/c-Fos supports SIV and HIV-1 latency in CD4 T cells infected in vivo
  2. Cobos Jiménez, Viviana; Geretz, Aviva; Tokarev, Andrey; Ehrenberg, Philip K; Deletsu, Selase; Machmach, Kawthar; Mudvari, Prakriti; Howard, J Natalie; Zelkoski, Amanda; Paquin-Proulx, Dominic; Del Prete,Greg; Subra, Caroline; Boritz, Eli A; Bosque, Alberto; Thomas, Rasmi; Bolton, Diane L
  3. iScience. 2023, Oct 20; 26(10): 108015.
  1. 21.   Protocol for measuring BRAF autoinhibition in live cells using a proximity-based NanoBRET assay
  2. Smith,Russell; Morrison,Deborah
  3. STAR Protocols. 2023, Aug 16; 4(3): 102461.
  1. 22.   A planar polarized MYO6-DOCK7-RAC1 axis promotes tissue fluidification in mammary epithelia
  2. Menin, Luca; Weber, Janine; Villa, Stefano; Martini, Emanuele; Maspero, Elena; Niño, Carlos A; Cancila, Valeria; Poli, Alessandro; Maiuri, Paolo; Palamidessi, Andrea; Frittoli, Emanuela; Bianchi, Fabrizio; Tripodo, Claudio; Walters,Kylie; Giavazzi, Fabio; Scita, Giorgio; Polo, Simona
  3. Cell Reports. 2023, Aug 16; 42(8): 113001.
  1. 23.   Structure of the HIV immature lattice allows for essential lattice remodeling within budded virions
  2. Guo, Sikao; Saha,Ipsita; Saffarian, Saveez; Johnson, Margaret E
  3. eLife. 2023, Jul 12; 12
  1. 24.   Heat shock factor 1 (HSF1) specifically potentiates c-MYC-mediated transcription independently of the canonical heat shock response
  2. Xu, Meng; Lin,Ling; Ram,Babul; Shriwas,Omprakash; Chuang, Kun-Han; Dai, Siyuan; Su, Kuo-Hui; Tang, Zijian; Dai,Chengkai
  3. Cell Reports. 2023, May 23; 42(6): 112557.
  1. 25.   Pleiotropic effects of BAFF on the senescence-associated secretome and growth arrest
  2. Rossi, Martina; Anerillas, Carlos; Idda, Maria Laura; Munk, Rachel; Shin, Chang Hoon; Donega, Stefano; Tsitsipatis, Dimitrios; Herman, Allison B; Martindale, Jennifer L; Yang, Xiaoling; Piao, Yulan; Mazan-Mamczarz, Krystyna; Fan, Jinshui; Ferrucci, Luigi; Johnson,Peter; De, Supriyo; Abdelmohsen, Kotb; Gorospe, Myriam
  3. eLife. 2023, Apr 21; 12
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