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Defining the Landscape of the Pauling-Corey Rippled Sheet: An Orphaned Motif Finding New Homes

  1. Author:
    Raskatov, Jevgenij A.
    Schneider,Joel
    Nilsson, Bradley L.
  2. Author Address

    UCSC, Dept Chem & Biochem, Santa Cruz, CA 95064 USA.NCI, Chem Biol Lab, Ctr Canc Res, NIH, Frederick, MD 21702 USA.Univ Rochester, Dept Chem, Rochester, NY 14627 USA.
    1. Year: 2021
    2. Date: MAY 18
    3. Epub Date: 2021 04 26
  1. Journal: Accounts of chemical research
  2. AMER CHEMICAL SOC,
    1. 54
    2. Pages: 2488-2501
  3. Type of Article: Article
  4. ISSN: 0001-4842
  1. Abstract:

    When peptides are mixed with their mirror images in an equimolar ratio, two-dimensional periodic structural folds can form, in which extended peptide strands are arrayed with alternating chirality. The resultant topography class, termed the rippled beta-sheet, was introduced as a theoretical concept by Pauling and Corey in 1953. Unlike other fundamental protein structural motifs identified around that time, including the alpha-helix and the pleated beta-sheet, it took several decades before conclusive experimental data supporting the proposed rippled beta-sheet motif were gained. Much of the key experimental evidence was provided over the course of the past decade through the concurrent efforts of our three laboratories. Studies that focused on developing new self-assembling hydrogel materials have shown that certain amphiphilic peptides form fibrils and hydrogel networks that are more rigid and have a higher thermodynamic stability when made from racemic peptide mixtures as opposed to pure enantiomers. Related interrogation of assemblies composed of mixtures of L- and D-amphiphilic peptides confirmed that the resulting fibrils were composed of alternating L/D peptides consistent with rippled beta-sheets. It was also demonstrated that mirror-image amyloid beta (A beta) could act as a molecular chaperone to promote oligomer-to-fibril conversion of the natural A beta enantiomer, which was found to reduce A beta neurotoxicity against different neuronal cell models. With a cross-disciplinary approach that combines experiment and theory, our three laboratories have demonstrated the unique biophysical, biochemical, and biological properties that arise upon mixing of peptide enantiomers, in consequence of rippled beta-sheet formation. In this Account, we give an overview of the early history of the rippled beta-sheet and provide a detailed structural description/definition of this motif relative to the pleated beta-sheet. We then summarize the key findings, obtained on three unique sets of aggregating mirror-image peptide pairs through independent efforts of our three laboratories, and use these results to delineate the landscape of the rippled beta-sheet structural motif to inspire future studies. Peptide sequence parameters that favor rippled beta-sheet assembly are described, along with the accompanying kinetic and thermodynamic properties, as well as the resulting emergent physical properties of the assemblies. The Account then concludes with a brief overview of some key unresolved challenges in this nascent field. There is much potential for future applications of this unique supramolecular motif in the realm of materials design and biomedical research. We hope this Account will stimulate much-needed discussion of this fascinating structural class to eventually produce a fully quantitative, rational framework for the molecular engineering of rippled beta-sheets in the future.

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External Sources

  1. DOI: 10.1021/acs.accounts.1c00084
  2. PMID: 33901396
  3. PMCID: PMC8154201
  4. WOS: 000654284300015

Library Notes

  1. Fiscal Year: FY2020-2021
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